| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is malE [C]
Identifier: 238023865
GI number: 238023865
Start: 483808
End: 485049
Strand: Direct
Name: malE [C]
Synonym: bglu_2g04040
Alternate gene names: 238023865
Gene position: 483808-485049 (Clockwise)
Preceding gene: 238023864
Following gene: 238023866
Centisome position: 17.11
GC content: 65.7
Gene sequence:
>1242_bases ATGAGATTTCGCACCAGCAAGCTGCTGCTCACCCTGACGACCGTCGCCGCGCTGGCCGCGTCCGGCGCGGCCGATGCGGG CACGCTGAAGGTCAACGTCGCCGCGCGCGGCAACCAGCGCGCGACATGGCAGAACACCTTCGAGCAGTTCCGCAAGGCCA ATCCCGACATCGACCTGAAGGTCAGCTATATCGGCGAGGAGGCGTTCAAGGTGCAGATGTCCGGCTGGCTCGCGACCGAC CCGCCCGACGTGGTGAGCTGGAACAACGGCGAGCGGCTCGCCTATTTCGCCAAGCGCGGACTGATCGAGGACCTGACGCC GGACTGGCAGAAGAACGGCTGGAACGCCACCTACGCGGCCGTGAAGCAGTCCTCGACCTACGGGGGCAAGCTCTACAGCC TTCCACTCGGCTATGACGCGTATGGCCTGTTTTACCGCAAGGACCTGTTCGACAAGGCCGGCATTCACGGCGAGCCGGCC GACTGGGCGCAGTTCCTCGAGGCGTGCCGCAAGCTGAAGGCGGCCGGCATCGCGCCGATCGCGGTGGCCGCGCGCGATGC ATGGACGCTCGCCGCGTGGTTCGACTATCTCGACTTGCGAATCAACGGCTATGCATTCCACCAGAAGCTGATGGCGGGCG AGGTCGCCTATACCGATCCGCGCGTGCGCGCCGTCTATGCGGCATGGAAGAAGCTGATCGACGACAAGGACTTCATCGAC AACGCCTTGTCCTACGACGTCGATTCGCTGAGCCCGCTGATCGTGAACGGCCAGGCCGCGATGACGCTGATGGGTACCTG GTATTCGGCGGCCCTGCTCGGCGCGGCACGCAACCCGATCGGCTTCTTCCGCTTCCCGGTGATCGACGCATCGGTGCCGC TGGCCGAGGACGGCCCGGTCAACGTGCTGGTGGTGCCGGCCAAGGCCCACAACAAGGCCGATGCCCGCCGCCTGCTCGCC TTCATGGGGCAGCCCGCGATCAACGGCGAGTTCGCCAAGGGCATGGGCCAGCTGCCGTCGAACAACAAGGCGCCCGAGCC GCAGGACCCGATCTCGAAGATCGGCTTCCATACGCTCGCGGCGACGACGGGCGGCATCGCGCAGTTCTACGACCGCGACA TGACCAAGGAGATGGCCGACGAGGGGATGAAGGCGATGCAGCAGTTCATGTCCGACCCGACGCAGCTCGACGCCATCCTG CAGCGCCTCGAGCAGACGCGCAAGCGCATCTACAAGAAGTAG
Upstream 100 bases:
>100_bases CTACCGGCGGTGCAGGCGCAGCCGGCGTTCGCCTAGCGGCACATCGATTCGCCGCGCCTCCCGCGCGCGGCCCATACAAG GCAAAAACCAGGAGACAACG
Downstream 100 bases:
>100_bases CGCGCGTGGAACGGGCCGGCCGCGCCGGCCCTCGATACCGCTTTCGTCCGTCTTGCCGAGGGTTTCCCGATGTCACTCAG CCTGTCCGATAACGTATTGC
Product: family 1 extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MRFRTSKLLLTLTTVAALAASGAADAGTLKVNVAARGNQRATWQNTFEQFRKANPDIDLKVSYIGEEAFKVQMSGWLATD PPDVVSWNNGERLAYFAKRGLIEDLTPDWQKNGWNATYAAVKQSSTYGGKLYSLPLGYDAYGLFYRKDLFDKAGIHGEPA DWAQFLEACRKLKAAGIAPIAVAARDAWTLAAWFDYLDLRINGYAFHQKLMAGEVAYTDPRVRAVYAAWKKLIDDKDFID NALSYDVDSLSPLIVNGQAAMTLMGTWYSAALLGAARNPIGFFRFPVIDASVPLAEDGPVNVLVVPAKAHNKADARRLLA FMGQPAINGEFAKGMGQLPSNNKAPEPQDPISKIGFHTLAATTGGIAQFYDRDMTKEMADEGMKAMQQFMSDPTQLDAIL QRLEQTRKRIYKK
Sequences:
>Translated_413_residues MRFRTSKLLLTLTTVAALAASGAADAGTLKVNVAARGNQRATWQNTFEQFRKANPDIDLKVSYIGEEAFKVQMSGWLATD PPDVVSWNNGERLAYFAKRGLIEDLTPDWQKNGWNATYAAVKQSSTYGGKLYSLPLGYDAYGLFYRKDLFDKAGIHGEPA DWAQFLEACRKLKAAGIAPIAVAARDAWTLAAWFDYLDLRINGYAFHQKLMAGEVAYTDPRVRAVYAAWKKLIDDKDFID NALSYDVDSLSPLIVNGQAAMTLMGTWYSAALLGAARNPIGFFRFPVIDASVPLAEDGPVNVLVVPAKAHNKADARRLLA FMGQPAINGEFAKGMGQLPSNNKAPEPQDPISKIGFHTLAATTGGIAQFYDRDMTKEMADEGMKAMQQFMSDPTQLDAIL QRLEQTRKRIYKK >Mature_413_residues MRFRTSKLLLTLTTVAALAASGAADAGTLKVNVAARGNQRATWQNTFEQFRKANPDIDLKVSYIGEEAFKVQMSGWLATD PPDVVSWNNGERLAYFAKRGLIEDLTPDWQKNGWNATYAAVKQSSTYGGKLYSLPLGYDAYGLFYRKDLFDKAGIHGEPA DWAQFLEACRKLKAAGIAPIAVAARDAWTLAAWFDYLDLRINGYAFHQKLMAGEVAYTDPRVRAVYAAWKKLIDDKDFID NALSYDVDSLSPLIVNGQAAMTLMGTWYSAALLGAARNPIGFFRFPVIDASVPLAEDGPVNVLVVPAKAHNKADARRLLA FMGQPAINGEFAKGMGQLPSNNKAPEPQDPISKIGFHTLAATTGGIAQFYDRDMTKEMADEGMKAMQQFMSDPTQLDAIL QRLEQTRKRIYKK
Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 45586; Mature: 45586
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFRTSKLLLTLTTVAALAASGAADAGTLKVNVAARGNQRATWQNTFEQFRKANPDIDLK CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE VSYIGEEAFKVQMSGWLATDPPDVVSWNNGERLAYFAKRGLIEDLTPDWQKNGWNATYAA EEEECCEEEEEEECCCCCCCCCCCEECCCCCEEHHHHHCCCHHHCCCCHHCCCCCHHHHH VKQSSTYGGKLYSLPLGYDAYGLFYRKDLFDKAGIHGEPADWAQFLEACRKLKAAGIAPI HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHH AVAARDAWTLAAWFDYLDLRINGYAFHQKLMAGEVAYTDPRVRAVYAAWKKLIDDKDFID EECCCCHHHHHHHHHHHHEEECCHHHHHHHHHCCEEECCCHHHHHHHHHHHHCCCHHHHH NALSYDVDSLSPLIVNGQAAMTLMGTWYSAALLGAARNPIGFFRFPVIDASVPLAEDGPV HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCE NVLVVPAKAHNKADARRLLAFMGQPAINGEFAKGMGQLPSNNKAPEPQDPISKIGFHTLA EEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCHHHHH ATTGGIAQFYDRDMTKEMADEGMKAMQQFMSDPTQLDAILQRLEQTRKRIYKK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFRTSKLLLTLTTVAALAASGAADAGTLKVNVAARGNQRATWQNTFEQFRKANPDIDLK CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE VSYIGEEAFKVQMSGWLATDPPDVVSWNNGERLAYFAKRGLIEDLTPDWQKNGWNATYAA EEEECCEEEEEEECCCCCCCCCCCEECCCCCEEHHHHHCCCHHHCCCCHHCCCCCHHHHH VKQSSTYGGKLYSLPLGYDAYGLFYRKDLFDKAGIHGEPADWAQFLEACRKLKAAGIAPI HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHH AVAARDAWTLAAWFDYLDLRINGYAFHQKLMAGEVAYTDPRVRAVYAAWKKLIDDKDFID EECCCCHHHHHHHHHHHHEEECCHHHHHHHHHCCEEECCCHHHHHHHHHHHHCCCHHHHH NALSYDVDSLSPLIVNGQAAMTLMGTWYSAALLGAARNPIGFFRFPVIDASVPLAEDGPV HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCE NVLVVPAKAHNKADARRLLAFMGQPAINGEFAKGMGQLPSNNKAPEPQDPISKIGFHTLA EEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCHHHHH ATTGGIAQFYDRDMTKEMADEGMKAMQQFMSDPTQLDAILQRLEQTRKRIYKK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]