| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is livK [C]
Identifier: 238023839
GI number: 238023839
Start: 448569
End: 449711
Strand: Reverse
Name: livK [C]
Synonym: bglu_2g03780
Alternate gene names: 238023839
Gene position: 449711-448569 (Counterclockwise)
Preceding gene: 238023845
Following gene: 238023838
Centisome position: 15.91
GC content: 67.1
Gene sequence:
>1143_bases GTGAAGGTGAAGATCTCGCATATCGCGCTTGCCGCAGCCGCCGCCCTCGCCGGCGCGGCCACGCCGGCCCTGGCCGGCGA TGCCGTCAAGATCGGCTTCGCCGCGCCGCTGACCGGCACCCAGTCGAACTACGGCACCGACATGCAAAAGGGCGTGCAGC TCGCGATCGACGATTTCAACGCGACCAAGCCGGTGATCGGCGGCAAGCCCGTCACCTTCGTGCTCGACTCGCAGGACGAC CAGGCCGACCCGCGCACCGGCACGACGGTGGCGCAGCGGCTGATCGACAGCAACGTCGCCGGGATCATCGGCCACTTCAA CTCGGGCACCAGCATCCCGGCCTCGGACCTCTACGAGCGCGCGGGGCTGCCGCAGATCTCGATGGCCACCTCCCCGCAAT ACACGGCGCGCGGCTACAAGACCACCTTCCGGCTGCTGACGAGCGACGCGCAGGCCGGCCGCATCGTCGGCAACTACGTC GTCAACACGCTGCACTACAAGCGCGTGGCGATCATCGACGACCGCACCGCCTACGGCCAGGGCATCGCGGACGAATTCGC CGACGCCGTGCAGAAGGCGGGCGGCACCATCATCAAGCGCGACTTCACCAACGACAAGGCGCTCGACTTCTCGGCGATCC TGACCAACCTGAAGGGGATGAGCCCCGACGCGGTGTTCTACGGCGGCGGCGACGCGCAATCGTCGCCGATGATCCGCAAG ATGCGCCAGCTCGGCATCAAGGCCGCGTTCGTGACGGGCGAGATGTCGAAGTCGCCGACCTTCCTGAAGGTGGGCGGCAC GGCGGCCGAGGGCGCGATCGTCTACATGGGCGGCCTGCCGAAGGAAAAGATGCCCGGCTTCGCGGGCTTCGAGCAGCGCT ACAAGGCACGCTTTCACGAGGACGTGGTGACCTACTCGCCCTATTCGTACGACGGCACGATCGCGCTGCTGACGGCGATG AAGAACGCGAACTCGACCGACCCGAAGGTCTATGGCCCCTATGTCGACAAGGTGTCGGTGAAGGGCGTGTCGGCCCCCAC CATCTCCTACGACGCGAAGGGCGACCTGCGCGACGCGCCGGTCACCATCTACCGCGTCGACCACGGCGCGTTCAAGGCCG TCGATACCATCGCCGGGAACTGA
Upstream 100 bases:
>100_bases GATTTCAGCACAGTAGAGGGCAGCGGCACGCCGCCCTCCCGCGATCGCCAACAAGCCGGCGCACGCGCGCCGGCCACAGC AGTCAAAAGGGGAATCGAAA
Downstream 100 bases:
>100_bases GAGCCGGCCGGGCCGCCGCCGCGGGCCGGCTCGCCCCTCCAGGACTCCTGAGCTTGGCCCGCCCCGCCGCCGCCGCGCTC GCGTGCGGCCCGGCCGGCGG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKVKISHIALAAAAALAGAATPALAGDAVKIGFAAPLTGTQSNYGTDMQKGVQLAIDDFNATKPVIGGKPVTFVLDSQDD QADPRTGTTVAQRLIDSNVAGIIGHFNSGTSIPASDLYERAGLPQISMATSPQYTARGYKTTFRLLTSDAQAGRIVGNYV VNTLHYKRVAIIDDRTAYGQGIADEFADAVQKAGGTIIKRDFTNDKALDFSAILTNLKGMSPDAVFYGGGDAQSSPMIRK MRQLGIKAAFVTGEMSKSPTFLKVGGTAAEGAIVYMGGLPKEKMPGFAGFEQRYKARFHEDVVTYSPYSYDGTIALLTAM KNANSTDPKVYGPYVDKVSVKGVSAPTISYDAKGDLRDAPVTIYRVDHGAFKAVDTIAGN
Sequences:
>Translated_380_residues MKVKISHIALAAAAALAGAATPALAGDAVKIGFAAPLTGTQSNYGTDMQKGVQLAIDDFNATKPVIGGKPVTFVLDSQDD QADPRTGTTVAQRLIDSNVAGIIGHFNSGTSIPASDLYERAGLPQISMATSPQYTARGYKTTFRLLTSDAQAGRIVGNYV VNTLHYKRVAIIDDRTAYGQGIADEFADAVQKAGGTIIKRDFTNDKALDFSAILTNLKGMSPDAVFYGGGDAQSSPMIRK MRQLGIKAAFVTGEMSKSPTFLKVGGTAAEGAIVYMGGLPKEKMPGFAGFEQRYKARFHEDVVTYSPYSYDGTIALLTAM KNANSTDPKVYGPYVDKVSVKGVSAPTISYDAKGDLRDAPVTIYRVDHGAFKAVDTIAGN >Mature_380_residues MKVKISHIALAAAAALAGAATPALAGDAVKIGFAAPLTGTQSNYGTDMQKGVQLAIDDFNATKPVIGGKPVTFVLDSQDD QADPRTGTTVAQRLIDSNVAGIIGHFNSGTSIPASDLYERAGLPQISMATSPQYTARGYKTTFRLLTSDAQAGRIVGNYV VNTLHYKRVAIIDDRTAYGQGIADEFADAVQKAGGTIIKRDFTNDKALDFSAILTNLKGMSPDAVFYGGGDAQSSPMIRK MRQLGIKAAFVTGEMSKSPTFLKVGGTAAEGAIVYMGGLPKEKMPGFAGFEQRYKARFHEDVVTYSPYSYDGTIALLTAM KNANSTDPKVYGPYVDKVSVKGVSAPTISYDAKGDLRDAPVTIYRVDHGAFKAVDTIAGN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=349, Percent_Identity=30.3724928366762, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI48994941, Length=351, Percent_Identity=29.0598290598291, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40151; Mature: 40151
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKISHIALAAAAALAGAATPALAGDAVKIGFAAPLTGTQSNYGTDMQKGVQLAIDDFN CEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCEEEEEECCC ATKPVIGGKPVTFVLDSQDDQADPRTGTTVAQRLIDSNVAGIIGHFNSGTSIPASDLYER CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH AGLPQISMATSPQYTARGYKTTFRLLTSDAQAGRIVGNYVVNTLHYKRVAIIDDRTAYGQ CCCCEEEECCCCCHHCCCHHEEEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECCCHHCC GIADEFADAVQKAGGTIIKRDFTNDKALDFSAILTNLKGMSPDAVFYGGGDAQSSPMIRK CHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH MRQLGIKAAFVTGEMSKSPTFLKVGGTAAEGAIVYMGGLPKEKMPGFAGFEQRYKARFHE HHHCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHH DVVTYSPYSYDGTIALLTAMKNANSTDPKVYGPYVDKVSVKGVSAPTISYDAKGDLRDAP CCEEECCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEECCCCCCEEEECCCCCCCCCC VTIYRVDHGAFKAVDTIAGN EEEEEECCCHHHHHHHHCCC >Mature Secondary Structure MKVKISHIALAAAAALAGAATPALAGDAVKIGFAAPLTGTQSNYGTDMQKGVQLAIDDFN CEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCEEEEEECCC ATKPVIGGKPVTFVLDSQDDQADPRTGTTVAQRLIDSNVAGIIGHFNSGTSIPASDLYER CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH AGLPQISMATSPQYTARGYKTTFRLLTSDAQAGRIVGNYVVNTLHYKRVAIIDDRTAYGQ CCCCEEEECCCCCHHCCCHHEEEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECCCHHCC GIADEFADAVQKAGGTIIKRDFTNDKALDFSAILTNLKGMSPDAVFYGGGDAQSSPMIRK CHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHH MRQLGIKAAFVTGEMSKSPTFLKVGGTAAEGAIVYMGGLPKEKMPGFAGFEQRYKARFHE HHHCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHH DVVTYSPYSYDGTIALLTAMKNANSTDPKVYGPYVDKVSVKGVSAPTISYDAKGDLRDAP CCEEECCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEECCCCCCEEEECCCCCCCCCC VTIYRVDHGAFKAVDTIAGN EEEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA