| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is proP [H]
Identifier: 238023838
GI number: 238023838
Start: 446823
End: 448118
Strand: Reverse
Name: proP [H]
Synonym: bglu_2g03770
Alternate gene names: 238023838
Gene position: 448118-446823 (Counterclockwise)
Preceding gene: 238023839
Following gene: 238023836
Centisome position: 15.85
GC content: 68.98
Gene sequence:
>1296_bases ATGCAAGCATACGAAACGAGCCACGCGCAAACCGCTGCCGCCGAGCGCCCCCTCACGCGCAGCGATTACAAGACCCTCGG CCTCGCGGCGCTCGGCGGTGCCCTGGAGTTCTACGACTTCATCATCTTCGTGTTCTTCGCACCGGCGATCGGGCAGCTGT TCTTCCCGCACGACATTCCGGACTGGCTGCGCCAGTTGCAGACTTTCGGCATCTTCGCGGCCGGCTATCTGGCGCGCCCG CTCGGCGGCATCATCATGGCGCACTTCGGCGACCTGGTCGGGCGCAAGCGGATGTTCACGCTGAGCGTGCTGCTGATGGC GATCCCGACGCTGCTGATGGGCCTGCTGCCCACCTTCGACACGATCGGCATCCTCGCCCCGGTGCTGCTGCTGCTGTTCC GCATCCTGCAGGGCGCGGCGGTGGGCGGAGAAGTGCCGGGCGCCTGGGTGTTCGTGTCCGAACACGTGCCCGGCAGCCGC ATCGGCTACGCCTGCGGCACGCTCACGGCGGGCCTGACGGCCGGCATCCTGCTCGGCTCGCTGGTGGCCGCCAGCGTCAC CGCGCACTTCTCGCAGGCCGAGATCGCCGCCTACGCGTGGCGCCTGCCGTTCCTGCTCGGCGGCGTGTTCGGCATGTTCT CCGTCTACCTGCGCCGCTGGCTGCACGAGACGCCGGTGTTCGCCGAGCTGCAGGCGCGCAAGGCGCTGGCCGCCGAGATT CCGCTCAAGGCCGTGCTGCGCGATCACGGCCGCGCGGTGCTGGTCTCGATGGTGCTGACCTGGATGCTGTCGGCCGCGAT CGTGGTGGTGATCCTGATGACGCCGACGCTGCTGCAAAAGCAGCTGCACATCCCCGCGGCCACCGCGCTGTTCGCCAACA GCATCGCCACGCTGTGCCTGACGATCGGCTGCGTGACGGCGGGCGCGCTGGCCGACCGCTTCGGCGCGAAGGCGGTGCTG GTGGCGGGCTCGCTGCTGTTGGCCGCCAGCTTCTGCACGCTGTATGCGCGGGTGGCCGCCGACGCCTCGACGCTGGTGCC GCTCTACGCGCTCACCGGCTTCCTGGTGGGCACCGTGGGCGCGGTGCCCACCGCCATGGTGCGCAGTTTCCCGGCCGTGA TCCGCTTTTCCGGCATCTCGTTCTCGTACAACGTCGCTTACGCGATTTTCGGCGGGCTCTCGCCGGTGATCGTGTCGCTG ATGATCAAATCGAACCCGTTCGCACCGACCGCCTATGTCGGCGCGGTCTGCGTGATCGGCGCACTCGGCGCGCTTTGCGC GCGCAGCGTGCGCTGA
Upstream 100 bases:
>100_bases CGCAGCCCGGGCCGCGCGCCGATCCGGCGCACCGCGCGGGACGCTTGACGGTGTCGCGCGCCGCGCCCGCCGCAAAACTC GAATATCGATCGTCCAGACC
Downstream 100 bases:
>100_bases GCGGCGGGAGCCGGCCGCTTCGTGGTCCGCCCGGGGCGCCTCGCGGCGCCCTTTTTCATGCCCGGCGCCCATGCGAGGCG CGGCCGAGGCGGGACCTCAG
Product: general substrate transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MQAYETSHAQTAAAERPLTRSDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPDWLRQLQTFGIFAAGYLARP LGGIIMAHFGDLVGRKRMFTLSVLLMAIPTLLMGLLPTFDTIGILAPVLLLLFRILQGAAVGGEVPGAWVFVSEHVPGSR IGYACGTLTAGLTAGILLGSLVAASVTAHFSQAEIAAYAWRLPFLLGGVFGMFSVYLRRWLHETPVFAELQARKALAAEI PLKAVLRDHGRAVLVSMVLTWMLSAAIVVVILMTPTLLQKQLHIPAATALFANSIATLCLTIGCVTAGALADRFGAKAVL VAGSLLLAASFCTLYARVAADASTLVPLYALTGFLVGTVGAVPTAMVRSFPAVIRFSGISFSYNVAYAIFGGLSPVIVSL MIKSNPFAPTAYVGAVCVIGALGALCARSVR
Sequences:
>Translated_431_residues MQAYETSHAQTAAAERPLTRSDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPDWLRQLQTFGIFAAGYLARP LGGIIMAHFGDLVGRKRMFTLSVLLMAIPTLLMGLLPTFDTIGILAPVLLLLFRILQGAAVGGEVPGAWVFVSEHVPGSR IGYACGTLTAGLTAGILLGSLVAASVTAHFSQAEIAAYAWRLPFLLGGVFGMFSVYLRRWLHETPVFAELQARKALAAEI PLKAVLRDHGRAVLVSMVLTWMLSAAIVVVILMTPTLLQKQLHIPAATALFANSIATLCLTIGCVTAGALADRFGAKAVL VAGSLLLAASFCTLYARVAADASTLVPLYALTGFLVGTVGAVPTAMVRSFPAVIRFSGISFSYNVAYAIFGGLSPVIVSL MIKSNPFAPTAYVGAVCVIGALGALCARSVR >Mature_431_residues MQAYETSHAQTAAAERPLTRSDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIPDWLRQLQTFGIFAAGYLARP LGGIIMAHFGDLVGRKRMFTLSVLLMAIPTLLMGLLPTFDTIGILAPVLLLLFRILQGAAVGGEVPGAWVFVSEHVPGSR IGYACGTLTAGLTAGILLGSLVAASVTAHFSQAEIAAYAWRLPFLLGGVFGMFSVYLRRWLHETPVFAELQARKALAAEI PLKAVLRDHGRAVLVSMVLTWMLSAAIVVVILMTPTLLQKQLHIPAATALFANSIATLCLTIGCVTAGALADRFGAKAVL VAGSLLLAASFCTLYARVAADASTLVPLYALTGFLVGTVGAVPTAMVRSFPAVIRFSGISFSYNVAYAIFGGLSPVIVSL MIKSNPFAPTAYVGAVCVIGALGALCARSVR
Specific function: May be a proton symporter invoved in the uptake of osmolytes such as proline and glycine betaine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=422, Percent_Identity=28.436018957346, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1788292, Length=435, Percent_Identity=32.183908045977, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=33.4146341463415, Blast_Score=132, Evalue=6e-32, Organism=Escherichia coli, GI1789941, Length=410, Percent_Identity=30.2439024390244, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI87082231, Length=450, Percent_Identity=22.6666666666667, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082404, Length=314, Percent_Identity=22.9299363057325, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45515; Mature: 45515
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAYETSHAQTAAAERPLTRSDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIP CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DWLRQLQTFGIFAAGYLARPLGGIIMAHFGDLVGRKRMFTLSVLLMAIPTLLMGLLPTFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIGILAPVLLLLFRILQGAAVGGEVPGAWVFVSEHVPGSRIGYACGTLTAGLTAGILLGS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LVAASVTAHFSQAEIAAYAWRLPFLLGGVFGMFSVYLRRWLHETPVFAELQARKALAAEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PLKAVLRDHGRAVLVSMVLTWMLSAAIVVVILMTPTLLQKQLHIPAATALFANSIATLCL CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TIGCVTAGALADRFGAKAVLVAGSLLLAASFCTLYARVAADASTLVPLYALTGFLVGTVG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AVPTAMVRSFPAVIRFSGISFSYNVAYAIFGGLSPVIVSLMIKSNPFAPTAYVGAVCVIG HHHHHHHHHHHHHHEECCCCEEHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH ALGALCARSVR HHHHHHHHCCC >Mature Secondary Structure MQAYETSHAQTAAAERPLTRSDYKTLGLAALGGALEFYDFIIFVFFAPAIGQLFFPHDIP CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DWLRQLQTFGIFAAGYLARPLGGIIMAHFGDLVGRKRMFTLSVLLMAIPTLLMGLLPTFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIGILAPVLLLLFRILQGAAVGGEVPGAWVFVSEHVPGSRIGYACGTLTAGLTAGILLGS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LVAASVTAHFSQAEIAAYAWRLPFLLGGVFGMFSVYLRRWLHETPVFAELQARKALAAEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PLKAVLRDHGRAVLVSMVLTWMLSAAIVVVILMTPTLLQKQLHIPAATALFANSIATLCL CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TIGCVTAGALADRFGAKAVLVAGSLLLAASFCTLYARVAADASTLVPLYALTGFLVGTVG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AVPTAMVRSFPAVIRFSGISFSYNVAYAIFGGLSPVIVSLMIKSNPFAPTAYVGAVCVIG HHHHHHHHHHHHHHEECCCCEEHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH ALGALCARSVR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10708580 [H]