Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yqhA [C]

Identifier: 238023804

GI number: 238023804

Start: 403196

End: 403741

Strand: Direct

Name: yqhA [C]

Synonym: bglu_2g03400

Alternate gene names: 238023804

Gene position: 403196-403741 (Clockwise)

Preceding gene: 238023803

Following gene: 339717965

Centisome position: 14.26

GC content: 59.52

Gene sequence:

>546_bases
ATGCGACCCACGGAAGAAACGAAAGGCCATGCGTCGAATGCCGCCGAGAGACTGTTCGAACACGGTCTGTTTGCGAGCCG
CTGGGTGTTGGCGCCGATCTATGCGGGGCTGGCGCTCGGGATGCTCATGTTGCTGATCAAGTTCTGCCAGGAGTTCTGGC
ATCTGGCCGTCACGCTGCTCGATAGTGAAGTGGAGGACGTCATCCTCGGGGTGCTGTCGCTCGTCGACCTCTCGCTGATG
GCCAATCTTCTGCTCATGATCATATTCGGCGGCTATCAGAATTTTGTCTCGCGGCTCAAGCTCGGCGGTCACGAGGACAC
GCCGGAATGGATCGGACACGTCGGATTCACCGACATCAAGCTGAAGCTGATGGCGTCGATCGTGGCGATATCGGCCATCG
AGGTGCTGCGTGGATTTCTGTCGCTCGACAAGGTCGGTCTGACGACGATCATCTGGGGGATCGCGGTGCACATGACCTTT
GTGCTGTCGGCGGTCCTGCTCGCGGGGATGGACTGGATCAGCGCCAAGACCCGGGCGATCAAGTGA

Upstream 100 bases:

>100_bases
CGTCCCGGTCGAACGGCACCAGCCGGCGGGCCGGCGCAAGCAAATGTGTCGGCATGCCGACGACGATGACACAGCCGGCA
CGCCGGTATCGAGGAAGATG

Downstream 100 bases:

>100_bases
GCCAACCGGCCCGCGCGCCTGCGCGGGCCGGTTGGCTGCCGGGCGTCAGCGCTTGGCCGTGACGTCGGCGCGCGAGCGCG
CCAGATAGGCGTCGGTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLLDSEVEDVILGVLSLVDLSLM
ANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIKLKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTF
VLSAVLLAGMDWISAKTRAIK

Sequences:

>Translated_181_residues
MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLLDSEVEDVILGVLSLVDLSLM
ANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIKLKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTF
VLSAVLLAGMDWISAKTRAIK
>Mature_181_residues
MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLLDSEVEDVILGVLSLVDLSLM
ANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIKLKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTF
VLSAVLLAGMDWISAKTRAIK

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=156, Percent_Identity=42.3076923076923, Blast_Score=128, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 19937; Mature: 19937

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLL
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSEVEDVILGVLSLVDLSLMANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHH
LKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTFVLSAVLLAGMDWISAKTRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MRPTEETKGHASNAAERLFEHGLFASRWVLAPIYAGLALGMLMLLIKFCQEFWHLAVTLL
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSEVEDVILGVLSLVDLSLMANLLLMIIFGGYQNFVSRLKLGGHEDTPEWIGHVGFTDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHH
LKLMASIVAISAIEVLRGFLSLDKVGLTTIIWGIAVHMTFVLSAVLLAGMDWISAKTRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA