| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is vanA [H]
Identifier: 238023772
GI number: 238023772
Start: 356294
End: 357418
Strand: Reverse
Name: vanA [H]
Synonym: bglu_2g03040
Alternate gene names: 238023772
Gene position: 357418-356294 (Counterclockwise)
Preceding gene: 238023775
Following gene: 238023765
Centisome position: 12.64
GC content: 66.4
Gene sequence:
>1125_bases ATGCATGCAGTGCCCTTGTCGCAGCCCGACGATGTGATCGAACCGACCGCCACCGCGCCCGTGCGTGATCTGCGCCGCGT GCCCATCCACCCCGACTTCTGGTATCCGCTCGCCTGGTCGCGCGAACTGAAGCGCGGCAAGACGCTCGGCGTGCATTTCG CCGGCGATCCGATCGTGCTGTTTCGTGGCGACTCGGGCACGGTATTTGCGCTCGAGGACCGCTGCGCGCACCGCCAGGTG CCGCTGCATGCGGGCGTGGTGGACGGCGACGCGCTGCGCTGCGGCTACCACGGCTGGACCTACGACTGCAGCGGCAAGTG CGTGGACGTGCCCTACCTCGGCAAGGAGCGGCTGCCCAACGGCGTGCGCTCGTATCCGTGCCGCGAGGTGCAGGGCCTGA TCTTCGTGTTCACCGGCGATTTGGCGCTGGCCGACGAGAAGCCGGTGCCGGCGCTTCCCACCGTGTCGGACCCGAAATAC AAGACGCGCCGTTTCGGCCGCGAGGTGAAGTGTCATTACTCGTTCATGCACGAGAACCTGATGGACATGAACCACCAGTT CCTGCATCGCCGCGAGATGGGCCAGATGAAGGCGCGCTCGCTGGGCCGCCGGCGCGGCGAGGGCTGGGTGGAAGTGGACT ACACCTTCTCGCGCGCCGAGGGCAAGCAGCCGATCGGCGAGGCGCTGGTGTTCGGCGCCAGCAAGAAGCCGCAGGATCAG AGCGACAAGAGCGTGATGACGATCCGCACCGAATACCCGTACCAGACGCTGAAGATCCTCTCCAGCGAAGGCACGCTGGT GATGGACCTGTGGATCGTCTACGTGCCGCTCGACAGGCAGCAGCGCACCAACCGCACGTTCGGCATGCTGTCGATCCGCA AGCCCTCGTTTCCGTTCGCGCTGGACCTGGCCTGGCCGCTGCTGGTGTGGTTTACCGAGCGGATCTTCAAGGAGGATCGC TGGATCGTCGAGCGCGAGCAGGAAGCGCACGACATGCAAGGCGAGGACTGGAACCACGAGGTGTTCCCCGTCATCAACGA CCTGCGCGACGTGCTGCGCAACAACGGCGCGCGCACCGTGATCCCGATCCTCAACCTGGGCGCCGAACCGCGGCCCGCCG CCTGA
Upstream 100 bases:
>100_bases GCTCGCCGCACGAAGGCGAGTTTCGCGTAAACTGCGCCAGATCCTCCCTTCGCGCTAGGCCGCGTAGGTCGAAGCACCGT ATTGCCAGGAGATGCCCCGC
Downstream 100 bases:
>100_bases AGCAGGCCCCCTGCCCTCTCCTGCGCTGATCGGCGGGCGCGACTTGGCCCGCGCCCGCGCCGTGTCCGCGCACCACGCAC CGCGCCGTCAGGCGGCGAAC
Product: phenylpropionate dioxygenase
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MHAVPLSQPDDVIEPTATAPVRDLRRVPIHPDFWYPLAWSRELKRGKTLGVHFAGDPIVLFRGDSGTVFALEDRCAHRQV PLHAGVVDGDALRCGYHGWTYDCSGKCVDVPYLGKERLPNGVRSYPCREVQGLIFVFTGDLALADEKPVPALPTVSDPKY KTRRFGREVKCHYSFMHENLMDMNHQFLHRREMGQMKARSLGRRRGEGWVEVDYTFSRAEGKQPIGEALVFGASKKPQDQ SDKSVMTIRTEYPYQTLKILSSEGTLVMDLWIVYVPLDRQQRTNRTFGMLSIRKPSFPFALDLAWPLLVWFTERIFKEDR WIVEREQEAHDMQGEDWNHEVFPVINDLRDVLRNNGARTVIPILNLGAEPRPAA
Sequences:
>Translated_374_residues MHAVPLSQPDDVIEPTATAPVRDLRRVPIHPDFWYPLAWSRELKRGKTLGVHFAGDPIVLFRGDSGTVFALEDRCAHRQV PLHAGVVDGDALRCGYHGWTYDCSGKCVDVPYLGKERLPNGVRSYPCREVQGLIFVFTGDLALADEKPVPALPTVSDPKY KTRRFGREVKCHYSFMHENLMDMNHQFLHRREMGQMKARSLGRRRGEGWVEVDYTFSRAEGKQPIGEALVFGASKKPQDQ SDKSVMTIRTEYPYQTLKILSSEGTLVMDLWIVYVPLDRQQRTNRTFGMLSIRKPSFPFALDLAWPLLVWFTERIFKEDR WIVEREQEAHDMQGEDWNHEVFPVINDLRDVLRNNGARTVIPILNLGAEPRPAA >Mature_374_residues MHAVPLSQPDDVIEPTATAPVRDLRRVPIHPDFWYPLAWSRELKRGKTLGVHFAGDPIVLFRGDSGTVFALEDRCAHRQV PLHAGVVDGDALRCGYHGWTYDCSGKCVDVPYLGKERLPNGVRSYPCREVQGLIFVFTGDLALADEKPVPALPTVSDPKY KTRRFGREVKCHYSFMHENLMDMNHQFLHRREMGQMKARSLGRRRGEGWVEVDYTFSRAEGKQPIGEALVFGASKKPQDQ SDKSVMTIRTEYPYQTLKILSSEGTLVMDLWIVYVPLDRQQRTNRTFGMLSIRKPSFPFALDLAWPLLVWFTERIFKEDR WIVEREQEAHDMQGEDWNHEVFPVINDLRDVLRNNGARTVIPILNLGAEPRPAA
Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71983709, Length=181, Percent_Identity=29.2817679558011, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI161085896, Length=173, Percent_Identity=27.7456647398844, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 42885; Mature: 42885
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAVPLSQPDDVIEPTATAPVRDLRRVPIHPDFWYPLAWSRELKRGKTLGVHFAGDPIVL CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEE FRGDSGTVFALEDRCAHRQVPLHAGVVDGDALRCGYHGWTYDCSGKCVDVPYLGKERLPN EECCCCCEEEECCCCCCCCCCCCCCEECCCEEEECCCCCEEECCCCEEECCCCCHHHCCC GVRSYPCREVQGLIFVFTGDLALADEKPVPALPTVSDPKYKTRRFGREVKCHYSFMHENL CHHCCCCHHHCCEEEEEECCEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHH MDMNHQFLHRREMGQMKARSLGRRRGEGWVEVDYTFSRAEGKQPIGEALVFGASKKPQDQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHEECCCCCCCCC SDKSVMTIRTEYPYQTLKILSSEGTLVMDLWIVYVPLDRQQRTNRTFGMLSIRKPSFPFA CCCEEEEEEECCCHHEEEEECCCCCEEEEEEEEEEECCCHHHCCCCEEEEEEECCCCCEE LDLAWPLLVWFTERIFKEDRWIVEREQEAHDMQGEDWNHEVFPVINDLRDVLRNNGARTV EHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE IPILNLGAEPRPAA EEEECCCCCCCCCC >Mature Secondary Structure MHAVPLSQPDDVIEPTATAPVRDLRRVPIHPDFWYPLAWSRELKRGKTLGVHFAGDPIVL CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEE FRGDSGTVFALEDRCAHRQVPLHAGVVDGDALRCGYHGWTYDCSGKCVDVPYLGKERLPN EECCCCCEEEECCCCCCCCCCCCCCEECCCEEEECCCCCEEECCCCEEECCCCCHHHCCC GVRSYPCREVQGLIFVFTGDLALADEKPVPALPTVSDPKYKTRRFGREVKCHYSFMHENL CHHCCCCHHHCCEEEEEECCEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHHHHHH MDMNHQFLHRREMGQMKARSLGRRRGEGWVEVDYTFSRAEGKQPIGEALVFGASKKPQDQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHEECCCCCCCCC SDKSVMTIRTEYPYQTLKILSSEGTLVMDLWIVYVPLDRQQRTNRTFGMLSIRKPSFPFA CCCEEEEEEECCCHHEEEEECCCCCEEEEEEEEEEECCCHHHCCCCEEEEEEECCCCCEE LDLAWPLLVWFTERIFKEDRWIVEREQEAHDMQGEDWNHEVFPVINDLRDVLRNNGARTV EHHHHHHHHHHHHHHHHCCCCEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE IPILNLGAEPRPAA EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3170489 [H]