| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023751
Identifier: 238023751
GI number: 238023751
Start: 329725
End: 330417
Strand: Reverse
Name: 238023751
Synonym: bglu_2g02830
Alternate gene names: NA
Gene position: 330417-329725 (Counterclockwise)
Preceding gene: 238023753
Following gene: 238023723
Centisome position: 11.69
GC content: 70.71
Gene sequence:
>693_bases ATGCCACACCCGATCCCGTTCCCCACGATCCGCGCGATCGCCTTCGATTTCGACGGCGTGATTCTCGACTCGGCCCGGAT GAAGGTGGATCTGTTCCTCGAGTGCTATGAGGACCATGGCCGGCCGCTCACGCCCGCGCAGCGCGCTGCGATGCTCGCCC ACCTGACGCATCACGGCGGCGTCGGCCGCGTCGCCAAGTTCACCCATTACGAACGCGCGATCTTCGGCCGCGAGCCCGAT CCCGAGACGGTGGCCGCGCTCGCGCGGCGCTACAGCGACCTGCTGATGGCGCGCATCGACGGCTGCCCCGAACTGCCCGG CGCGCGCGCGTTCCTCGAACGGATGCAGGGCCGGCTGTCGCTGCACCTGATCTCCGGCACCACCGACGACGATCTGCGCC ACATCACGCAGCGGCGCGATTTCGCGCGCTACTTCCGCACCATCGTGGGCGCGCCGGTCACCAAGCCGGCCGCGTTCGCC GAGGTGCTGCGCCTGGGCGGCTGGCAGCCGGCCGAGGTGCTGGCGATCGGCGATTCGTGGACGGAATTCGATGCGGCGCG CGGACTGGGCATGCCGTTCGCGGGCATCGTGGCACCGGGCGAACCGAATCCGTTCCCGGCCCCGGTGCCGGTGTACGAGG ACCTGGCGGCGCTCGACGCAGCCTGGGAAGATGGCGATGCGGCGGCGCGCTGA
Upstream 100 bases:
>100_bases GCGGGCGCCCGGCCCCGCCGCCGCACGACTTCCGGTAAAGTCTTCGCTTTGCGCGCGGGCCGCCGCCCGCGCACCGCCCC ACCGCCTGCCGAGCCCCGCG
Downstream 100 bases:
>100_bases GGGCGGCCGGCCGGCCGCACCGGCTACGCCGACAGGGCCGTGCCGGCGCGGCACCGCGGCCCGCTGAAGAGCCGGCGCGA TGCGCGCCGCTCCCGGCCTC
Product: Haloacid dehalogenase domain-containing protein hydrolase
Products: NA
Alternate protein names: Haloacid Dehalogenase-Like Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPHPIPFPTIRAIAFDFDGVILDSARMKVDLFLECYEDHGRPLTPAQRAAMLAHLTHHGGVGRVAKFTHYERAIFGREPD PETVAALARRYSDLLMARIDGCPELPGARAFLERMQGRLSLHLISGTTDDDLRHITQRRDFARYFRTIVGAPVTKPAAFA EVLRLGGWQPAEVLAIGDSWTEFDAARGLGMPFAGIVAPGEPNPFPAPVPVYEDLAALDAAWEDGDAAAR
Sequences:
>Translated_230_residues MPHPIPFPTIRAIAFDFDGVILDSARMKVDLFLECYEDHGRPLTPAQRAAMLAHLTHHGGVGRVAKFTHYERAIFGREPD PETVAALARRYSDLLMARIDGCPELPGARAFLERMQGRLSLHLISGTTDDDLRHITQRRDFARYFRTIVGAPVTKPAAFA EVLRLGGWQPAEVLAIGDSWTEFDAARGLGMPFAGIVAPGEPNPFPAPVPVYEDLAALDAAWEDGDAAAR >Mature_229_residues PHPIPFPTIRAIAFDFDGVILDSARMKVDLFLECYEDHGRPLTPAQRAAMLAHLTHHGGVGRVAKFTHYERAIFGREPDP ETVAALARRYSDLLMARIDGCPELPGARAFLERMQGRLSLHLISGTTDDDLRHITQRRDFARYFRTIVGAPVTKPAAFAE VLRLGGWQPAEVLAIGDSWTEFDAARGLGMPFAGIVAPGEPNPFPAPVPVYEDLAALDAAWEDGDAAAR
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25239; Mature: 25108
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPIPFPTIRAIAFDFDGVILDSARMKVDLFLECYEDHGRPLTPAQRAAMLAHLTHHGG CCCCCCCCHHHHEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC VGRVAKFTHYERAIFGREPDPETVAALARRYSDLLMARIDGCPELPGARAFLERMQGRLS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEE LHLISGTTDDDLRHITQRRDFARYFRTIVGAPVTKPAAFAEVLRLGGWQPAEVLAIGDSW EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCH TEFDAARGLGMPFAGIVAPGEPNPFPAPVPVYEDLAALDAAWEDGDAAAR HHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PHPIPFPTIRAIAFDFDGVILDSARMKVDLFLECYEDHGRPLTPAQRAAMLAHLTHHGG CCCCCCCHHHHEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC VGRVAKFTHYERAIFGREPDPETVAALARRYSDLLMARIDGCPELPGARAFLERMQGRLS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEE LHLISGTTDDDLRHITQRRDFARYFRTIVGAPVTKPAAFAEVLRLGGWQPAEVLAIGDSW EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCH TEFDAARGLGMPFAGIVAPGEPNPFPAPVPVYEDLAALDAAWEDGDAAAR HHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA