| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is hrpK [H]
Identifier: 238023725
GI number: 238023725
Start: 295764
End: 297656
Strand: Direct
Name: hrpK [H]
Synonym: bglu_2g02530
Alternate gene names: 238023725
Gene position: 295764-297656 (Clockwise)
Preceding gene: 238023724
Following gene: 238023726
Centisome position: 10.46
GC content: 70.42
Gene sequence:
>1893_bases CTGCGGGTTTCCTTTTTCGAATTCTTCTCTTCCGTTCCCATGACCTCGCTCTCAACGCTCCCGTTTTCTCCGCCCGTCGC CGCCCCGTCGATGACGGGCGTGGCAGATCCGTCGAGCAGCCTGCAGGCCGGCATGCAGCAGCTCGAACAGATCGACTCGC AACTGCAGCAGATGGTGCGCGCCCTGATGTCGTCCGCGCAGCAACAGGAGGCCGGCGGCAATTCGGGCAGCAGCGACGCG ACGCCGTCGAGCAGCCTGGCGATGCCGCAGACCGCCGCCGCCACGCTGCCGCAGGAGGGCGCGACGGGCGCGGGCGCGGG GGCCGCGAGCGGCGCGGCGACCGACGACGGCAAGTACGCGGCGCTCGACAGCTACAGCCAGGCCAACGACCAGTCCGATC TCGCGAAGTGGGCCGATCTCGCGCCGCCCGACCAGGGCGCCTCGCTCGAGCGTCCGCTCGCGGCGATGCAGATCCTGAGC GGCAAGGCCGGTCCCGACGGGCAGCCGCCCAGCGACGCGCAGAAGGCCGCCGCGATGCAGTTCGTCAACGACAACCCGTC GCTGAAGACGGCGCTGCAGAACACCGGCGCGCTGAAGTCCGACGGCACCATCGACACGAAGAAGATGAACGCGTTCATGG GCCAGGTCAGCACCAATCTCGATCAGGCCGATTCGGACATCAAGGACTACATGAAGAAGCATCCCGACGCGGATGCCGAT TCGGTGAACGTCGAGCGTTCGGCGGGGCTGCTCAAGGCCTACAACGCGATCGCGGGCGAGTCCGAGGGCCACAAGTCGAA CGGCAAGAACGGCCACAACTACACGCACGGCGGCAAGAGCGGCGGCGGCCTGACCACCCAGAAGCAGATCGAGGATCTGC AGAAGGACGCGGGCTTCAGCGCGTCGCTGAAGGCGGCCGCGCAGGCGTTCGGCTCCGACGGCGGGTTCGACGACCTGGAT CGCAGCGGCGACGACAAGGCCACCAGCAAGCGCGACCAGGTCTACTCGACCAAGAACCTCGACCACTTCCTCCACGACGA CGCGCCGACCACCCAGGCCGGCTCGCAGCAGTTCCTGCAGGACGCCAGCCTGCAGAACATCACCGGCAACACCGACATCA GCCAGCTCAACGGCGACGTGATCCAGAACCCGCAGAACTACACGCCGCAGCAGAAGGCGGCGGTGATGGTGAAGCTGATG GAGACCCTGGTGGACGTGCAGGCCGGCGGCTCGGACAAGCTGCGCAACGTCGACAAGACGGTGGCCGCGCTCCAGCAGGA CATCCAGAAGCTCGCGAGCGACCCGGACACGGCCGCCTACCTGCAGCAGACGGTGCCGCCCGAGATGCAGCAGATGTCGG GCGAATTCCAGCAGGCGGGCGGCGTCGGCACGGCCGGCAGCGGCGCCGCCGACGGCACGGGCGGCACCACGGCCGCGGGC GGCAGCGGCCAGTCGGCCGGCCAGACCCTCGACGACGTGCACCGCGGGCTCAGCGACGCGAAGACGGTCACCGATACGCT GAGCGACCTCGCCAAGGGTGACGGCTTCATGGGCCTGGGCGGCGACAGCGCGGCGGCCGAGGCGGCCGGCGCGGCGGCGG CATCGGGCGGCGCGGAAGGCGCGGCCGAGGGCGCGGCGGTGGGTGCCGAGGCGGCCGAAGGCGCGGCGGCCGGCGTCGAG GGCGGCGCGGCGGCGGCCGAGGGCGTGGCCGGCGCGGTCGGCGGCGCGCTCGCGGCGGCCGCGCCGGTGATGGCGGTGGG CGCGGCCGTGGTCGGCGTGGCCGGCATCGTGTTCGCGATCGTCGAGGCCGTGAAGAAGCACAACGACCAGAAGAAGTTCG CCTCGAACGTGAACCCGACGCTGCAACAGTTCGGTATTCCGCTGCCGTCCTGA
Upstream 100 bases:
>100_bases ATGCCGAAGGCGCAGGACGACGACGTCGCCTGACGCCGGCGGCCCGCCGCCGCGGCGGCGGGCCGTTCGCAGCGGCTGTC ACGCGCAGCGGCGGGCGCCG
Downstream 100 bases:
>100_bases TTCCCGGAGGCGCCATGCGCAATCTGGTATTCGACCGCCACGACGACGTCATGCGCTTCGTCGCGGCGCGCACCGGCGAG GAGCGCTACGACGACGCCAA
Product: type III effector HrpK1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MRVSFFEFFSSVPMTSLSTLPFSPPVAAPSMTGVADPSSSLQAGMQQLEQIDSQLQQMVRALMSSAQQQEAGGNSGSSDA TPSSSLAMPQTAAATLPQEGATGAGAGAASGAATDDGKYAALDSYSQANDQSDLAKWADLAPPDQGASLERPLAAMQILS GKAGPDGQPPSDAQKAAAMQFVNDNPSLKTALQNTGALKSDGTIDTKKMNAFMGQVSTNLDQADSDIKDYMKKHPDADAD SVNVERSAGLLKAYNAIAGESEGHKSNGKNGHNYTHGGKSGGGLTTQKQIEDLQKDAGFSASLKAAAQAFGSDGGFDDLD RSGDDKATSKRDQVYSTKNLDHFLHDDAPTTQAGSQQFLQDASLQNITGNTDISQLNGDVIQNPQNYTPQQKAAVMVKLM ETLVDVQAGGSDKLRNVDKTVAALQQDIQKLASDPDTAAYLQQTVPPEMQQMSGEFQQAGGVGTAGSGAADGTGGTTAAG GSGQSAGQTLDDVHRGLSDAKTVTDTLSDLAKGDGFMGLGGDSAAAEAAGAAAASGGAEGAAEGAAVGAEAAEGAAAGVE GGAAAAEGVAGAVGGALAAAAPVMAVGAAVVGVAGIVFAIVEAVKKHNDQKKFASNVNPTLQQFGIPLPS
Sequences:
>Translated_630_residues MRVSFFEFFSSVPMTSLSTLPFSPPVAAPSMTGVADPSSSLQAGMQQLEQIDSQLQQMVRALMSSAQQQEAGGNSGSSDA TPSSSLAMPQTAAATLPQEGATGAGAGAASGAATDDGKYAALDSYSQANDQSDLAKWADLAPPDQGASLERPLAAMQILS GKAGPDGQPPSDAQKAAAMQFVNDNPSLKTALQNTGALKSDGTIDTKKMNAFMGQVSTNLDQADSDIKDYMKKHPDADAD SVNVERSAGLLKAYNAIAGESEGHKSNGKNGHNYTHGGKSGGGLTTQKQIEDLQKDAGFSASLKAAAQAFGSDGGFDDLD RSGDDKATSKRDQVYSTKNLDHFLHDDAPTTQAGSQQFLQDASLQNITGNTDISQLNGDVIQNPQNYTPQQKAAVMVKLM ETLVDVQAGGSDKLRNVDKTVAALQQDIQKLASDPDTAAYLQQTVPPEMQQMSGEFQQAGGVGTAGSGAADGTGGTTAAG GSGQSAGQTLDDVHRGLSDAKTVTDTLSDLAKGDGFMGLGGDSAAAEAAGAAAASGGAEGAAEGAAVGAEAAEGAAAGVE GGAAAAEGVAGAVGGALAAAAPVMAVGAAVVGVAGIVFAIVEAVKKHNDQKKFASNVNPTLQQFGIPLPS >Mature_630_residues MRVSFFEFFSSVPMTSLSTLPFSPPVAAPSMTGVADPSSSLQAGMQQLEQIDSQLQQMVRALMSSAQQQEAGGNSGSSDA TPSSSLAMPQTAAATLPQEGATGAGAGAASGAATDDGKYAALDSYSQANDQSDLAKWADLAPPDQGASLERPLAAMQILS GKAGPDGQPPSDAQKAAAMQFVNDNPSLKTALQNTGALKSDGTIDTKKMNAFMGQVSTNLDQADSDIKDYMKKHPDADAD SVNVERSAGLLKAYNAIAGESEGHKSNGKNGHNYTHGGKSGGGLTTQKQIEDLQKDAGFSASLKAAAQAFGSDGGFDDLD RSGDDKATSKRDQVYSTKNLDHFLHDDAPTTQAGSQQFLQDASLQNITGNTDISQLNGDVIQNPQNYTPQQKAAVMVKLM ETLVDVQAGGSDKLRNVDKTVAALQQDIQKLASDPDTAAYLQQTVPPEMQQMSGEFQQAGGVGTAGSGAADGTGGTTAAG GSGQSAGQTLDDVHRGLSDAKTVTDTLSDLAKGDGFMGLGGDSAAAEAAGAAAASGGAEGAAEGAAVGAEAAEGAAAGVE GGAAAAEGVAGAVGGALAAAAPVMAVGAAVVGVAGIVFAIVEAVKKHNDQKKFASNVNPTLQQFGIPLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63363; Mature: 63363
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSFFEFFSSVPMTSLSTLPFSPPVAAPSMTGVADPSSSLQAGMQQLEQIDSQLQQMVR CCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALMSSAQQQEAGGNSGSSDATPSSSLAMPQTAAATLPQEGATGAGAGAASGAATDDGKYA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE ALDSYSQANDQSDLAKWADLAPPDQGASLERPLAAMQILSGKAGPDGQPPSDAQKAAAMQ ECCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH FVNDNPSLKTALQNTGALKSDGTIDTKKMNAFMGQVSTNLDQADSDIKDYMKKHPDADAD HHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC SVNVERSAGLLKAYNAIAGESEGHKSNGKNGHNYTHGGKSGGGLTTQKQIEDLQKDAGFS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ASLKAAAQAFGSDGGFDDLDRSGDDKATSKRDQVYSTKNLDHFLHDDAPTTQAGSQQFLQ HHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHH DASLQNITGNTDISQLNGDVIQNPQNYTPQQKAAVMVKLMETLVDVQAGGSDKLRNVDKT HHHHHCCCCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VAALQQDIQKLASDPDTAAYLQQTVPPEMQQMSGEFQQAGGVGTAGSGAADGTGGTTAAG HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GSGQSAGQTLDDVHRGLSDAKTVTDTLSDLAKGDGFMGLGGDSAAAEAAGAAAASGGAEG CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCCCC AAEGAAVGAEAAEGAAAGVEGGAAAAEGVAGAVGGALAAAAPVMAVGAAVVGVAGIVFAI CCCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAVKKHNDQKKFASNVNPTLQQFGIPLPS HHHHHHCCHHHHHHHCCCHHHHHCCCCCCC >Mature Secondary Structure MRVSFFEFFSSVPMTSLSTLPFSPPVAAPSMTGVADPSSSLQAGMQQLEQIDSQLQQMVR CCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALMSSAQQQEAGGNSGSSDATPSSSLAMPQTAAATLPQEGATGAGAGAASGAATDDGKYA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE ALDSYSQANDQSDLAKWADLAPPDQGASLERPLAAMQILSGKAGPDGQPPSDAQKAAAMQ ECCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH FVNDNPSLKTALQNTGALKSDGTIDTKKMNAFMGQVSTNLDQADSDIKDYMKKHPDADAD HHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC SVNVERSAGLLKAYNAIAGESEGHKSNGKNGHNYTHGGKSGGGLTTQKQIEDLQKDAGFS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC ASLKAAAQAFGSDGGFDDLDRSGDDKATSKRDQVYSTKNLDHFLHDDAPTTQAGSQQFLQ HHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHH DASLQNITGNTDISQLNGDVIQNPQNYTPQQKAAVMVKLMETLVDVQAGGSDKLRNVDKT HHHHHCCCCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VAALQQDIQKLASDPDTAAYLQQTVPPEMQQMSGEFQQAGGVGTAGSGAADGTGGTTAAG HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GSGQSAGQTLDDVHRGLSDAKTVTDTLSDLAKGDGFMGLGGDSAAAEAAGAAAASGGAEG CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHCCCCCC AAEGAAVGAEAAEGAAAGVEGGAAAAEGVAGAVGGALAAAAPVMAVGAAVVGVAGIVFAI CCCHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEAVKKHNDQKKFASNVNPTLQQFGIPLPS HHHHHHCCHHHHHHHCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8106313; 8274770 [H]