| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023700
Identifier: 238023700
GI number: 238023700
Start: 267281
End: 270199
Strand: Reverse
Name: 238023700
Synonym: bglu_2g02260
Alternate gene names: NA
Gene position: 270199-267281 (Counterclockwise)
Preceding gene: 238023701
Following gene: 238023699
Centisome position: 9.56
GC content: 75.64
Gene sequence:
>2919_bases ATGTCGAAATCCGCTTCCCAGCGTGCGCCCACCCGGCGGCACGCCACGGCGCCGTCCGACACCCCGGGCGGCCGCACCAT CGCCTTTTCCCGCTTCTGGCTGCTGCGCGACGCGGGCCTGCTGATCGCCGACGGCGAGATCGTCTCGCTCGGCGCGCGCC CCCTCGCGATCCTGATCCGGCTGATCGACGCGAACGGCCGCGCGGTGTCGGTGGCCGCCTTGCGCGAGGCGGTCTGGCCC GGGCTCGAGGTCGACGTCAACACCGTCCAGTCGCAAATCTCGGCACTGCGCCGCGCGCTCGGCGAGGATCGCGACCTGAT CGAGACCGTGCCGGCCCGCGGCTACCGGTTCGCGGGCGACCTGCGCATCGTCGAGCCGCCCGACGGCGCCGAGCCCGCCG CCGACCCGGCCGCGCCCGCCGACCCGCTCCCGCCCGAACCCGCGCCGCCCGCCGCCGCGCCGCTCGCGCGCAACACGCTC GCAGCGGCCCAGCCGCACGACCCGGCCGCGTTCGTCGGCCGCCATGCCGAGCTGGCCGAACTGCTCGCGACGGTGCCCGG CGCCCGCATCCTCACGCTGACGGGCGCGGCCGGGATCGGCAAGACGCGGCTCGCGATCGAGGCCGCGCGCAGCCTGGCCC CGCAATTTCCCGACGGCGTGGCGTATGTGCCGCTCGCCACGCTGTCGGCGCCCGACCGGCTGGTCCACGCGATCGCCGAC GCGCTCGAGGTCGACACGCGCGGCGGCGAGATCGATGCCGCGCAGCTCGCCGAGGCGCTCGGCGAACGGCGCCTGCTGAT CGTGCTGGACCACGCGGCGCCGCTGCGCCACGCGGTGGCGCGCGCGGCCGAGCGGCTGGCCGCCGCCACGCCCGGCGTGC ACCTGCTGATCACCAGCGACACCGCGCTCGCGATCGGCGGCGAGCGCGCGATGGCGGTGGCACCGCTGGGCGTATCGGCC GACGCGCACCAGCCCGACGACATCGGCAACAGCGACGCGCTCGCGCTGTTCTTCACCGCGTTCGAGCGCCGCCAGCGCCG CGACGGCACCACCGCGCCGGCCCGGCTGCCGGCCGATGCGCTGGCCGCGGCCGCCTCGATCTGCGCAAGCCTCGACGGCA TGCCGCATCCGGTCGAGCTGCTGGCGGCCGATATCGCCGCCAGGCTGGCCTCGAACGGCGACGTGCGCGCGGCGTTCGTG GCCTGCGCGACCGAGCTCGACGGCTTCCTCGCCCAGCGCACCGGCTCGCGGCGCCGGCTGCTGCCGCACGCGGACCTGCA GCTGGCCTGCCTCGATTTCGTCTACGGCAGGCTCGACGCGGGCACCCGCACGGTGCTGCGCCGCCTCGGCCTGTTCCACG GCGCGTTCGAGGAAGGCGCGGCGGCCGAGCTGCTGGTGGCGTTCGATCGCGCGCTCGGCCTCGACGACACGCCCGCCGAG ACCACCCGCCAGCGGCTGCGCCAACTGGTGGGCGCCGGCCTCGTCGAGGACGTCGAATGCGACGGCGAGATGCGGCTGCA ACTGCCGCCCTCGGTGCGCCGCTTCGCGCTGACCACGCTCGCGCGCACGCCCGAGCGCGCCACGCCCGGCGCGCTGCACG CGGCACTGGTGGCGCGCATGGTGGCGCGCCGCTTCGGCGCGGGGCCGTTTCTCGCGCCGCCCACCGTGCGCCACGACCTG GCCGACCTGCGTGCCGCGCTCGAGTGGGCGATCGACGCCGGCAAGCCGGAGCTCGGCGCGGACCTGCTCGACCACTCCGC GCCGCTCTGGGTGCGGCTCTCGCTCGGCGACGAGTACGTGGGATGGGCGCGGCGGGTGGCCGTGTGCGGCAACGGCGGCG AGCTCCGGCGGATCCGCCCCGAGATGCGCGTGGCCGCCGCGCTCGCCAACGCGCTCACCTGCAAGCGCAACGCGGCCAGC GAAGCGGCGCTGCAATGGCAGCGCGCCTACGAGATCGCCAGCGCCTGCGCCGACAATTCCACGCGGCTGCGCGCGCTGCT GCACCTGTTCTTCCGCGCCCAGATCCGCGGCGAAACCGACCGCACCCGCGAACACGCCCGCAAGTACACCGAGATCGCCG ATGCCGCGCGCTGGCCCGCCGCGCAGCACAACGCGCGGCTGATCGAGGGCATGCTGCGCGCCTATACCGGCGACCTGCAC ATGGCGATCCCGCTGCTGGCCGGCGCCAACGGCGCGCATCCCGACGTGATCCGCGAGGCGCGCGCGCTGGCCACGCGCCA CGGCCTGTCGCTGCACCTGATCGCGAGCGCCGCGCTGTCCACCGTGCAGTGGCTGGTGGGCGGCAAGCCGCGCGACGGCG AAATTCCCGAGCTGGCCGCCCCCGACAACGAGCCGATGTCGTGCTGCGTCGCGCTGCGCCACGCCTGCGCGCTCGCCGTG GTCGAGGACGACGCGCCGCGCGCCGAGGCCTACGCGGCCGCGCTGGTCGAGCTGGCCAGTTCGTCCGCGCCGCGCCGCTG GCTGCGCACCGGCCTGGACGTGCAGCGCTGGCTGCTGGCCCGCCAGGGCGACCACGCCACCGGCCTGCAGCTGGTGGAGG AGATCGCCCAGCGCTTCGAGTCGCACCGCGTGCCGCCCGTCGATCTCGCGTTCGTGACCACGCTGATGCCGTCGATCGAC TTCACGCGCCAGGGCGCGCTCGCGAACGCGCTCGCGCACGGCATCACGCAGGCCGTGCGGCGCGCCGATCGCACCGGCGA GCGCTGGACCAAGCCGTGGCTGCTGCATCTGCAGGGTGCGCTGTCGCGCGCGCGCGGCGAGCCGCGCGCCGTCACGCGGC GCAGCCTCACGCATGCGCTGCGCTGCGCGTCCGAACAGGGCGCCTATCGCATCGTCGAGCGGATTCGCGCCGATCTCGAT GCGCTCGACGCAAGCATCGACGGCAATGACGGCGATTGA
Upstream 100 bases:
>100_bases TCGACGGCATCGCCTCCGGAGAGTACATCTGGCTGCGCGCATGACCGCCTAGACGCCGCTCGGCCGATCAACCCGAGGCA GGCCTCCCGCGCAGTTCCCG
Downstream 100 bases:
>100_bases ATCGAAATCCGCCCGATTGCTTCGGATCGCCCGACGCCGCTTCGCCCCGGAGCGCGGGTTTTACCCAATGGCTGTCACAC ACGTAAATTAACGTGGAGCT
Product: winged helix family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 972; Mature: 971
Protein sequence:
>972_residues MSKSASQRAPTRRHATAPSDTPGGRTIAFSRFWLLRDAGLLIADGEIVSLGARPLAILIRLIDANGRAVSVAALREAVWP GLEVDVNTVQSQISALRRALGEDRDLIETVPARGYRFAGDLRIVEPPDGAEPAADPAAPADPLPPEPAPPAAAPLARNTL AAAQPHDPAAFVGRHAELAELLATVPGARILTLTGAAGIGKTRLAIEAARSLAPQFPDGVAYVPLATLSAPDRLVHAIAD ALEVDTRGGEIDAAQLAEALGERRLLIVLDHAAPLRHAVARAAERLAAATPGVHLLITSDTALAIGGERAMAVAPLGVSA DAHQPDDIGNSDALALFFTAFERRQRRDGTTAPARLPADALAAAASICASLDGMPHPVELLAADIAARLASNGDVRAAFV ACATELDGFLAQRTGSRRRLLPHADLQLACLDFVYGRLDAGTRTVLRRLGLFHGAFEEGAAAELLVAFDRALGLDDTPAE TTRQRLRQLVGAGLVEDVECDGEMRLQLPPSVRRFALTTLARTPERATPGALHAALVARMVARRFGAGPFLAPPTVRHDL ADLRAALEWAIDAGKPELGADLLDHSAPLWVRLSLGDEYVGWARRVAVCGNGGELRRIRPEMRVAAALANALTCKRNAAS EAALQWQRAYEIASACADNSTRLRALLHLFFRAQIRGETDRTREHARKYTEIADAARWPAAQHNARLIEGMLRAYTGDLH MAIPLLAGANGAHPDVIREARALATRHGLSLHLIASAALSTVQWLVGGKPRDGEIPELAAPDNEPMSCCVALRHACALAV VEDDAPRAEAYAAALVELASSSAPRRWLRTGLDVQRWLLARQGDHATGLQLVEEIAQRFESHRVPPVDLAFVTTLMPSID FTRQGALANALAHGITQAVRRADRTGERWTKPWLLHLQGALSRARGEPRAVTRRSLTHALRCASEQGAYRIVERIRADLD ALDASIDGNDGD
Sequences:
>Translated_972_residues MSKSASQRAPTRRHATAPSDTPGGRTIAFSRFWLLRDAGLLIADGEIVSLGARPLAILIRLIDANGRAVSVAALREAVWP GLEVDVNTVQSQISALRRALGEDRDLIETVPARGYRFAGDLRIVEPPDGAEPAADPAAPADPLPPEPAPPAAAPLARNTL AAAQPHDPAAFVGRHAELAELLATVPGARILTLTGAAGIGKTRLAIEAARSLAPQFPDGVAYVPLATLSAPDRLVHAIAD ALEVDTRGGEIDAAQLAEALGERRLLIVLDHAAPLRHAVARAAERLAAATPGVHLLITSDTALAIGGERAMAVAPLGVSA DAHQPDDIGNSDALALFFTAFERRQRRDGTTAPARLPADALAAAASICASLDGMPHPVELLAADIAARLASNGDVRAAFV ACATELDGFLAQRTGSRRRLLPHADLQLACLDFVYGRLDAGTRTVLRRLGLFHGAFEEGAAAELLVAFDRALGLDDTPAE TTRQRLRQLVGAGLVEDVECDGEMRLQLPPSVRRFALTTLARTPERATPGALHAALVARMVARRFGAGPFLAPPTVRHDL ADLRAALEWAIDAGKPELGADLLDHSAPLWVRLSLGDEYVGWARRVAVCGNGGELRRIRPEMRVAAALANALTCKRNAAS EAALQWQRAYEIASACADNSTRLRALLHLFFRAQIRGETDRTREHARKYTEIADAARWPAAQHNARLIEGMLRAYTGDLH MAIPLLAGANGAHPDVIREARALATRHGLSLHLIASAALSTVQWLVGGKPRDGEIPELAAPDNEPMSCCVALRHACALAV VEDDAPRAEAYAAALVELASSSAPRRWLRTGLDVQRWLLARQGDHATGLQLVEEIAQRFESHRVPPVDLAFVTTLMPSID FTRQGALANALAHGITQAVRRADRTGERWTKPWLLHLQGALSRARGEPRAVTRRSLTHALRCASEQGAYRIVERIRADLD ALDASIDGNDGD >Mature_971_residues SKSASQRAPTRRHATAPSDTPGGRTIAFSRFWLLRDAGLLIADGEIVSLGARPLAILIRLIDANGRAVSVAALREAVWPG LEVDVNTVQSQISALRRALGEDRDLIETVPARGYRFAGDLRIVEPPDGAEPAADPAAPADPLPPEPAPPAAAPLARNTLA AAQPHDPAAFVGRHAELAELLATVPGARILTLTGAAGIGKTRLAIEAARSLAPQFPDGVAYVPLATLSAPDRLVHAIADA LEVDTRGGEIDAAQLAEALGERRLLIVLDHAAPLRHAVARAAERLAAATPGVHLLITSDTALAIGGERAMAVAPLGVSAD AHQPDDIGNSDALALFFTAFERRQRRDGTTAPARLPADALAAAASICASLDGMPHPVELLAADIAARLASNGDVRAAFVA CATELDGFLAQRTGSRRRLLPHADLQLACLDFVYGRLDAGTRTVLRRLGLFHGAFEEGAAAELLVAFDRALGLDDTPAET TRQRLRQLVGAGLVEDVECDGEMRLQLPPSVRRFALTTLARTPERATPGALHAALVARMVARRFGAGPFLAPPTVRHDLA DLRAALEWAIDAGKPELGADLLDHSAPLWVRLSLGDEYVGWARRVAVCGNGGELRRIRPEMRVAAALANALTCKRNAASE AALQWQRAYEIASACADNSTRLRALLHLFFRAQIRGETDRTREHARKYTEIADAARWPAAQHNARLIEGMLRAYTGDLHM AIPLLAGANGAHPDVIREARALATRHGLSLHLIASAALSTVQWLVGGKPRDGEIPELAAPDNEPMSCCVALRHACALAVV EDDAPRAEAYAAALVELASSSAPRRWLRTGLDVQRWLLARQGDHATGLQLVEEIAQRFESHRVPPVDLAFVTTLMPSIDF TRQGALANALAHGITQAVRRADRTGERWTKPWLLHLQGALSRARGEPRAVTRRSLTHALRCASEQGAYRIVERIRADLDA LDASIDGNDGD
Specific function: Unknown
COG id: COG3903
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103724; Mature: 103593
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSASQRAPTRRHATAPSDTPGGRTIAFSRFWLLRDAGLLIADGEIVSLGARPLAILIR CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEECCCEEEECCHHHHHHHH LIDANGRAVSVAALREAVWPGLEVDVNTVQSQISALRRALGEDRDLIETVPARGYRFAGD HHCCCCCEEHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECC LRIVEPPDGAEPAADPAAPADPLPPEPAPPAAAPLARNTLAAAQPHDPAAFVGRHAELAE EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCHHHHHH LLATVPGARILTLTGAAGIGKTRLAIEAARSLAPQFPDGVAYVPLATLSAPDRLVHAIAD HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH ALEVDTRGGEIDAAQLAEALGERRLLIVLDHAAPLRHAVARAAERLAAATPGVHLLITSD HHHCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECC TALAIGGERAMAVAPLGVSADAHQPDDIGNSDALALFFTAFERRQRRDGTTAPARLPADA CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH LAAAASICASLDGMPHPVELLAADIAARLASNGDVRAAFVACATELDGFLAQRTGSRRRL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC LPHADLQLACLDFVYGRLDAGTRTVLRRLGLFHGAFEEGAAAELLVAFDRALGLDDTPAE CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH TTRQRLRQLVGAGLVEDVECDGEMRLQLPPSVRRFALTTLARTPERATPGALHAALVARM HHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VARRFGAGPFLAPPTVRHDLADLRAALEWAIDAGKPELGADLLDHSAPLWVRLSLGDEYV HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEECCCHHH GWARRVAVCGNGGELRRIRPEMRVAAALANALTCKRNAASEAALQWQRAYEIASACADNS HHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH TRLRALLHLFFRAQIRGETDRTREHARKYTEIADAARWPAAQHNARLIEGMLRAYTGDLH HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH MAIPLLAGANGAHPDVIREARALATRHGLSLHLIASAALSTVQWLVGGKPRDGEIPELAA EEHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC PDNEPMSCCVALRHACALAVVEDDAPRAEAYAAALVELASSSAPRRWLRTGLDVQRWLLA CCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH RQGDHATGLQLVEEIAQRFESHRVPPVDLAFVTTLMPSIDFTRQGALANALAHGITQAVR HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHH RADRTGERWTKPWLLHLQGALSRARGEPRAVTRRSLTHALRCASEQGAYRIVERIRADLD HHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALDASIDGNDGD HHCCCCCCCCCC >Mature Secondary Structure SKSASQRAPTRRHATAPSDTPGGRTIAFSRFWLLRDAGLLIADGEIVSLGARPLAILIR CCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEEECCCEEEECCHHHHHHHH LIDANGRAVSVAALREAVWPGLEVDVNTVQSQISALRRALGEDRDLIETVPARGYRFAGD HHCCCCCEEHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECC LRIVEPPDGAEPAADPAAPADPLPPEPAPPAAAPLARNTLAAAQPHDPAAFVGRHAELAE EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCHHHHHH LLATVPGARILTLTGAAGIGKTRLAIEAARSLAPQFPDGVAYVPLATLSAPDRLVHAIAD HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH ALEVDTRGGEIDAAQLAEALGERRLLIVLDHAAPLRHAVARAAERLAAATPGVHLLITSD HHHCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECC TALAIGGERAMAVAPLGVSADAHQPDDIGNSDALALFFTAFERRQRRDGTTAPARLPADA CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH LAAAASICASLDGMPHPVELLAADIAARLASNGDVRAAFVACATELDGFLAQRTGSRRRL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC LPHADLQLACLDFVYGRLDAGTRTVLRRLGLFHGAFEEGAAAELLVAFDRALGLDDTPAE CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH TTRQRLRQLVGAGLVEDVECDGEMRLQLPPSVRRFALTTLARTPERATPGALHAALVARM HHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH VARRFGAGPFLAPPTVRHDLADLRAALEWAIDAGKPELGADLLDHSAPLWVRLSLGDEYV HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEECCCHHH GWARRVAVCGNGGELRRIRPEMRVAAALANALTCKRNAASEAALQWQRAYEIASACADNS HHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH TRLRALLHLFFRAQIRGETDRTREHARKYTEIADAARWPAAQHNARLIEGMLRAYTGDLH HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH MAIPLLAGANGAHPDVIREARALATRHGLSLHLIASAALSTVQWLVGGKPRDGEIPELAA EEHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC PDNEPMSCCVALRHACALAVVEDDAPRAEAYAAALVELASSSAPRRWLRTGLDVQRWLLA CCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHH RQGDHATGLQLVEEIAQRFESHRVPPVDLAFVTTLMPSIDFTRQGALANALAHGITQAVR HCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHH RADRTGERWTKPWLLHLQGALSRARGEPRAVTRRSLTHALRCASEQGAYRIVERIRADLD HHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ALDASIDGNDGD HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]