| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is uxuB [H]
Identifier: 238023668
GI number: 238023668
Start: 216499
End: 217971
Strand: Reverse
Name: uxuB [H]
Synonym: bglu_2g01890
Alternate gene names: 238023668
Gene position: 217971-216499 (Counterclockwise)
Preceding gene: 238023672
Following gene: 238023667
Centisome position: 7.71
GC content: 73.52
Gene sequence:
>1473_bases ATGGCGAAACTCCTGAGCACCGCTGCGCTGTCGGCGCTGGCCCCGACCACACGACGGCCAACCTATGCGCGCGACCGGCT GCGCCGCGGCATCGTCCATCTCGGGCTCGGCGCGTTCCATCGCGCGCATCAGGCGCTCTACACGGAGGCGCTGCTCGAGC GCGGCGACGCACGCTGGGGCACGCTCGGCATCCATCTGCGCGAGCGCCGCATGGCCGACCGGCTCGCCGCGCAGGACACG CTTTACTCGGTGACCGAAAGCGACGGCGAGGCCGCGCACAGTCGCGTGATCGGCGGCCTGCTCGGCGCGCTGCATGCGCC CTCGGCGCTGTCCAGCGTGCTCGACGCGATCGCCGATCCCGGCGTCGCGATCATCAGCCTGACCGTAACCGAAAAGGGCT ACTGCATCGCGCCCGCCAGCGGCCAACTCGACGAGCACGATCCCGACCTCCGGCGCGACATGCTCGCGCCCGACGCGCCG CGCACCACGCTCGGCGTACTCGCCGCAGGCCTGCGCCGCCGCGCCGCCGCCGCGCCGCTGACGATCCTCTGTTGCGACAA CATGACCGCCAACGGCGATACGCTGCGCCGGCTGCTGATGCAGTACGCAGGGCTCACCGACGCCGCGCTCGCGCGCCGGA TCGGCGACACCATCGCGTTTCCGAACACCATGGTGGACCGCATCGTGCCGGCCGCGACGCCGGCCTCGCTCGCCGCGGCC GAGGCACGCCTGGGGCTGCGCGACGAGGCCGCGATCGTCTGCGAACCGTTTACGCAATGGGTCGTCGAGGACCGCTTCAG CGGTCCTCGGCCGGCCTGGGAGGACGCGGGCGCGCTGCTCACCGCGGACGTCCATCCCTACGAGGCGATGAAGCTGCGGC TGCTCAACGGCTCGCATTCGGCGATCGCCTATCTCGGGCAGCTGCGCGGGCTCGCCACCGTGGCCGACGCGATGGCCGAC CCGGCGCTGGCCGGCTTCGTGCATGGCCTGATGACCGAGGATCTGCTCGCCACGGTGGCCGTACCGGCCGGCTTCGACAT CGGTGCCTATTGCCGCGACCTGCTCGCCCGCTTTCGCAATCCCACGCTCGCGCACGAGACGCGCCAGATCGCCACCGACG GCACCCGGAAGGTGCCCATGCGCTGGCTGCCGGCCCTGCGCGAGAGCCTGGCCGCCGGCGTCGAGCGGCCACGGCTCGAA CGCGCGCTGGCCGCCTGGCTGCATTTCCTGGATACGGCGCGCAGCGACGCGGGCGAGCCGCTCGTGCTCGGCGATCCCGG TGCGGAGGCGCTGGCGGCCCGCCTGCAGTCGAGCGCCGCGCCGCTCGACAAGGCGCGGGCCGCGCTCGGCCACGCCAGCG TGTTCGGCAGCGTGCCATGGCCGGAGGCGTTCGTCACGCGGCTCGCGGGGCATCTCGACACGCTGCGCCGCGCCGGCACC GGCGCGCTGCTCGCCGTGCCCGGCCACCGCTGA
Upstream 100 bases:
>100_bases ATACGGGCAATTCCTAGCGTTTACACCGATAAAATCGGCGATACATGACGCCTATGCTTGGCTCATCACCAAATCTACCA TGGTAAATGCCAGTCCCACG
Downstream 100 bases:
>100_bases GCGCCGCGGCACCGTTTACCGCGGCGCCCGGCCCGCGGGCCGGCGCCGCCTGCCCCGGCACGCGCGACACCGGGGACGGC CCGCCGGCCGGACGCGCGAC
Product: mannitol dehydrogenase family protein
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MAKLLSTAALSALAPTTRRPTYARDRLRRGIVHLGLGAFHRAHQALYTEALLERGDARWGTLGIHLRERRMADRLAAQDT LYSVTESDGEAAHSRVIGGLLGALHAPSALSSVLDAIADPGVAIISLTVTEKGYCIAPASGQLDEHDPDLRRDMLAPDAP RTTLGVLAAGLRRRAAAAPLTILCCDNMTANGDTLRRLLMQYAGLTDAALARRIGDTIAFPNTMVDRIVPAATPASLAAA EARLGLRDEAAIVCEPFTQWVVEDRFSGPRPAWEDAGALLTADVHPYEAMKLRLLNGSHSAIAYLGQLRGLATVADAMAD PALAGFVHGLMTEDLLATVAVPAGFDIGAYCRDLLARFRNPTLAHETRQIATDGTRKVPMRWLPALRESLAAGVERPRLE RALAAWLHFLDTARSDAGEPLVLGDPGAEALAARLQSSAAPLDKARAALGHASVFGSVPWPEAFVTRLAGHLDTLRRAGT GALLAVPGHR
Sequences:
>Translated_490_residues MAKLLSTAALSALAPTTRRPTYARDRLRRGIVHLGLGAFHRAHQALYTEALLERGDARWGTLGIHLRERRMADRLAAQDT LYSVTESDGEAAHSRVIGGLLGALHAPSALSSVLDAIADPGVAIISLTVTEKGYCIAPASGQLDEHDPDLRRDMLAPDAP RTTLGVLAAGLRRRAAAAPLTILCCDNMTANGDTLRRLLMQYAGLTDAALARRIGDTIAFPNTMVDRIVPAATPASLAAA EARLGLRDEAAIVCEPFTQWVVEDRFSGPRPAWEDAGALLTADVHPYEAMKLRLLNGSHSAIAYLGQLRGLATVADAMAD PALAGFVHGLMTEDLLATVAVPAGFDIGAYCRDLLARFRNPTLAHETRQIATDGTRKVPMRWLPALRESLAAGVERPRLE RALAAWLHFLDTARSDAGEPLVLGDPGAEALAARLQSSAAPLDKARAALGHASVFGSVPWPEAFVTRLAGHLDTLRRAGT GALLAVPGHR >Mature_489_residues AKLLSTAALSALAPTTRRPTYARDRLRRGIVHLGLGAFHRAHQALYTEALLERGDARWGTLGIHLRERRMADRLAAQDTL YSVTESDGEAAHSRVIGGLLGALHAPSALSSVLDAIADPGVAIISLTVTEKGYCIAPASGQLDEHDPDLRRDMLAPDAPR TTLGVLAAGLRRRAAAAPLTILCCDNMTANGDTLRRLLMQYAGLTDAALARRIGDTIAFPNTMVDRIVPAATPASLAAAE ARLGLRDEAAIVCEPFTQWVVEDRFSGPRPAWEDAGALLTADVHPYEAMKLRLLNGSHSAIAYLGQLRGLATVADAMADP ALAGFVHGLMTEDLLATVAVPAGFDIGAYCRDLLARFRNPTLAHETRQIATDGTRKVPMRWLPALRESLAAGVERPRLER ALAAWLHFLDTARSDAGEPLVLGDPGAEALAARLQSSAAPLDKARAALGHASVFGSVPWPEAFVTRLAGHLDTLRRAGTG ALLAVPGHR
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=444, Percent_Identity=42.1171171171171, Blast_Score=342, Evalue=5e-95, Organism=Escherichia coli, GI1787823, Length=472, Percent_Identity=41.3135593220339, Blast_Score=340, Evalue=1e-94, Organism=Escherichia coli, GI1788497, Length=456, Percent_Identity=39.2543859649123, Blast_Score=319, Evalue=2e-88, Organism=Escherichia coli, GI48994885, Length=408, Percent_Identity=26.4705882352941, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1790028, Length=268, Percent_Identity=29.8507462686567, Blast_Score=96, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6324401, Length=487, Percent_Identity=34.0862422997947, Blast_Score=283, Evalue=6e-77, Organism=Saccharomyces cerevisiae, GI6320765, Length=487, Percent_Identity=34.0862422997947, Blast_Score=283, Evalue=6e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 52128; Mature: 51997
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLLSTAALSALAPTTRRPTYARDRLRRGIVHLGLGAFHRAHQALYTEALLERGDARWG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TLGIHLRERRMADRLAAQDTLYSVTESDGEAAHSRVIGGLLGALHAPSALSSVLDAIADP EEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC GVAIISLTVTEKGYCIAPASGQLDEHDPDLRRDMLAPDAPRTTLGVLAAGLRRRAAAAPL CEEEEEEEEECCCEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCE TILCCDNMTANGDTLRRLLMQYAGLTDAALARRIGDTIAFPNTMVDRIVPAATPASLAAA EEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHCCCHHHHHHHCCCCCCHHHHHH EARLGLRDEAAIVCEPFTQWVVEDRFSGPRPAWEDAGALLTADVHPYEAMKLRLLNGSHS HHHCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHCCCCEEEECCCCHHHHEEEEECCCHH AIAYLGQLRGLATVADAMADPALAGFVHGLMTEDLLATVAVPAGFDIGAYCRDLLARFRN HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC PTLAHETRQIATDGTRKVPMRWLPALRESLAAGVERPRLERALAAWLHFLDTARSDAGEP CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCE LVLGDPGAEALAARLQSSAAPLDKARAALGHASVFGSVPWPEAFVTRLAGHLDTLRRAGT EEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC GALLAVPGHR CCEEECCCCC >Mature Secondary Structure AKLLSTAALSALAPTTRRPTYARDRLRRGIVHLGLGAFHRAHQALYTEALLERGDARWG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE TLGIHLRERRMADRLAAQDTLYSVTESDGEAAHSRVIGGLLGALHAPSALSSVLDAIADP EEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC GVAIISLTVTEKGYCIAPASGQLDEHDPDLRRDMLAPDAPRTTLGVLAAGLRRRAAAAPL CEEEEEEEEECCCEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCE TILCCDNMTANGDTLRRLLMQYAGLTDAALARRIGDTIAFPNTMVDRIVPAATPASLAAA EEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHCCCHHHHHHHCCCCCCHHHHHH EARLGLRDEAAIVCEPFTQWVVEDRFSGPRPAWEDAGALLTADVHPYEAMKLRLLNGSHS HHHCCCCCCCEEEECHHHHHHHHHHCCCCCCCHHCCCCEEEECCCCHHHHEEEEECCCHH AIAYLGQLRGLATVADAMADPALAGFVHGLMTEDLLATVAVPAGFDIGAYCRDLLARFRN HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC PTLAHETRQIATDGTRKVPMRWLPALRESLAAGVERPRLERALAAWLHFLDTARSDAGEP CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCE LVLGDPGAEALAARLQSSAAPLDKARAALGHASVFGSVPWPEAFVTRLAGHLDTLRRAGT EEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC GALLAVPGHR CCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]