| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cycG [H]
Identifier: 238023666
GI number: 238023666
Start: 212460
End: 214115
Strand: Reverse
Name: cycG [H]
Synonym: bglu_2g01870
Alternate gene names: 238023666
Gene position: 214115-212460 (Counterclockwise)
Preceding gene: 238023667
Following gene: 238023665
Centisome position: 7.57
GC content: 69.38
Gene sequence:
>1656_bases ATGCCGTCACCAAGACTTTCATCGCGCTCGTACAAACGCCTTTCCATCGGCATCGCGGCCGCCGTCGTGCTCGGTGTGGG TGGCTTCCTGCTGCTGAGTTCGCCATGGATGTGGTCGATGACGCATCCGACGCGCAACGTCGCGAGTCCCGGCCCGGCCA ATCCCGTCAACGGGCGCGAGCTCTTCTTGGCCGGCGACTGCGCGACCTGCCACGCGAGTCCGGGCCGCCACAACCCCCTG CTGCTCGGCGGCGGCAAGGCGCTCGACACCGCGTTCGGCAAGTTCTTCATGCCGAACATCTCATCCGATCCCGATGACGG GATCGGCCGCTGGACACTGGCGCAGTTCACGCGCGCGATGCGCGAAGGCGTCGGCCCCGACGGCCGGAACCTCTACCCGG CGTTCCCCTATACCTCCTACCAGCGCCTGAGCGCCGACGACGTGCGCGACCTGTTCGCCTATCTGAAGACGCTGCCGCCG GTGCCGGGCAAGGCGCCCGTCCACCAGTTGGCGTTCCCGTACAACCTGCGGCGCGGCGTGGGCATCTGGCGGCTCATGTT CCTCGACGGCAAGCCGCTCGACGGCGGCGGCCCCGCGCCCGGTACGCCGGCCTCGCTCGGCAGCACGCCTGCGATCCACG ATCAACTGGTGGCACGCGGCCGCTATCTGGTGGAAGGCGCGGCCCACTGCGCCGAATGCCATTCGCCGCGCAACATGATG GGCGCGATCGAAAACGGCGAGCGCTTCGCCGGCGGCCCGGCGCCGGACGGCAAGGGTTATTTCCCGAACATCACGCAGAG CGACACCGGTATCAACTTCTGGGCCGCTGCCTCGATCGTCAATTATCTGAAGACGGGCGTGAGCCCGCTAGGCAAGACGG CCGGCGGCGACATGGCCGAGGTCGTGCAGAACACGCGGCAGTTGCCCACGCGCGACCTCTGGGCGATGGCCACCTACCTG AAGACGATCCCGGGCGTCGATCGCCCGGCTCCGGGCCAGCCGGAGCCGAACCGCACCGACAAGGTGGTGATGATCCCGGT GCGGCACGACGATTCGCCGCTGCCGGCCTCGCCGCAGGCCGACGTCGCCCGGACCGATACGCTCTACGTGGCGGCCACCA AGCCATTCTTCGGCAAGGCGGAGACGGTCGGCCGCAGCGACGGCAGCGACGGCAAGCTGCTGGCCGCCGCCACGCTGCAC GTGCTCGAGCGCGACGGCGACGTGCTGCGAGTCGAGCTCGACGGCTGGCAGCCGGCCGGCGTGACCTCGGTTATCTACGC CCGCCGCGGCAAGCGGATCCTGTCCGCGCTGCTCGACGACACAGCGGCGGCCGGCCTCGAACGCGGCCCCGCCCAGGTCG ATGCAGACACCGGCGCCGCGTGGACGCCAGTCAAACTCAGGGCGTGGATCGACGGCACCGATCTCAACACCAGCGTAGCG AATCTCTGGCGCTACTCGTCGGCGCTGCTGAACGGCACCTGCGCGGCCTGCCACTCGCTGCCCGAGCCGCGTCAGTTCTC CGCCAACCAGTGGGTCGGCACGCTCAACGGCATGCGCCGCTACACGTCGCTGACCGACGACCAGTACCGCATGCTGCTGA GCTACGTCCAGAACCATGCCCGGGACACGGCACCGCCTGCCGCGGCGAAGCCATGA
Upstream 100 bases:
>100_bases CTGCCCTGCTTGACCCGAGTCAACCCGGTCCGCTTCCCACGGGTGTTTCATAACTGCCGACATAGCAAAAAGATCCGCAA TACACCCAGGGGGAACCGAG
Downstream 100 bases:
>100_bases GCCCCGCCGCCAACGGGCAGGCGGCCCGCGTTGACGAGCGCGAAGCGGCGGCAGCCGTGGCCGGCTGGTTCGGCCGCCTG CTGCTGGCGCCGCTCGACGC
Product: diheme cytochrome c-type
Products: H2O; trimethylamine; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MPSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRELFLAGDCATCHASPGRHNPL LLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAMREGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPP VPGKAPVHQLAFPYNLRRGVGIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAEVVQNTRQLPTRDLWAMATYL KTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQADVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLH VLERDGDVLRVELDGWQPAGVTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHARDTAPPAAAKP
Sequences:
>Translated_551_residues MPSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRELFLAGDCATCHASPGRHNPL LLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAMREGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPP VPGKAPVHQLAFPYNLRRGVGIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAEVVQNTRQLPTRDLWAMATYL KTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQADVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLH VLERDGDVLRVELDGWQPAGVTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHARDTAPPAAAKP >Mature_550_residues PSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRELFLAGDCATCHASPGRHNPLL LGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAMREGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPPV PGKAPVHQLAFPYNLRRGVGIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMMG AIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAEVVQNTRQLPTRDLWAMATYLK TIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQADVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLHV LERDGDVLRVELDGWQPAGVTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVAN LWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHARDTAPPAAAKP
Specific function: Particularly expressed when cells generate energy via aerobic respiration [H]
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787230, Length=183, Percent_Identity=38.7978142076503, Blast_Score=125, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 59016; Mature: 58885
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00141 ASP_PROTEASE ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCE LFLAGDCATCHASPGRHNPLLLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAM EEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH REGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPPVPGKAPVHQLAFPYNLRRGV HHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHCCC GIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAE HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VVQNTRQLPTRDLWAMATYLKTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQA HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC DVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLHVLERDGDVLRVELDGWQPAG CCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEECCCCCCC VTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHH NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHA HHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RDTAPPAAAKP CCCCCCCCCCC >Mature Secondary Structure PSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRE CCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCE LFLAGDCATCHASPGRHNPLLLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAM EEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH REGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPPVPGKAPVHQLAFPYNLRRGV HHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHCCC GIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAE HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VVQNTRQLPTRDLWAMATYLKTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQA HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC DVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLHVLERDGDVLRVELDGWQPAG CCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEECCCCCCC VTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHH NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHA HHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RDTAPPAAAKP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: trimethylamine-N-oxide; NADH [C]
Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7543472 [H]