| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023655
Identifier: 238023655
GI number: 238023655
Start: 195998
End: 197317
Strand: Direct
Name: 238023655
Synonym: bglu_2g01690
Alternate gene names: NA
Gene position: 195998-197317 (Clockwise)
Preceding gene: 238023654
Following gene: 238023656
Centisome position: 6.93
GC content: 61.36
Gene sequence:
>1320_bases ATGAACCGTGCATATCGCTCGATCTGGAACGAAGCCCTCGGCGCTTGGGTTGCTGCATCGGAACTCTGTTCCACTCAGGG TAAAGCGAATAAGTCGTCCATTCCGAAGGTCGGCCGGGTCAGCGCGAGAATCCCGCTCGTCTTCGCTCTGGGATTCGTCC TAGGCGAATCGGCAATGGCGAACAACCTAGCGGTCGGAGACGACGCGAAGAACATGATTGGTTATGCCGTCTCGCGGACC AAGAATGGCTACGAAACTTTAGCTGGCGGCGATGACACGAACGCCAACACCGCCGTTGGCACGTCGGCGACCGCCAACGG CGGCCGTAGTACCGCTATCGGGGATACTGCAACGGCGACTGGCTTTCACAGCGTCGCCATCGGCGCAGACTCGAAGGCGA CCGGTAACGGCAGTGTCGCGGTGGGTAATGACAGTACGGATGACGCACAGTCGAATGTCTTCAGCGTAGGGAACCGCGAG ACTCAACGCCGAATTATCAACATCGCACCCGGCGATGTGTCGTCGACCAGTACCGACGCGATCAACGGCAGTCAGCTTTA TTCGCTGTCCACGTCGACCTCGACTGGCCTGTCGTCGGCTATCAGTTCCATTGGTTCGCTGTCGACCTCGATCTCGACAA GCATCGGTTCGCTATCCACGGGCCTGAGCACGACGAATAACTACATTGCGTCGCTCTCAAGCGGCGTGACGAACATCGAC AACACGCTGAACGAGTTGTCAACGGCGATAAACAACAACACCACGCGCTCGCTCAGTTCCGGCGGCTACGCGGCGGACAT GTCGAGTCCGGCCGCCCAGGCGCCGTCGGTCACGGCCGGCTCGAACTCGGTCGCGCTCGGCCAGGGCTCGAACGACGACG GGCGCTCGAACGTGGTATCGGTGGGCAGTGCATCGCAACAGCGCCAGCTCACCAACGTGGCGCCGGGCACGCAAGGCACG GACGCGGTCAACCTCAACCAGCTGAGTGCGCTGTCGACTTCTATGTCACAATCGTTCGCCGGCCAGCAGAACCAGATCAA TACGCTGGGTACGCAGATCACGCAGACCCAGCAGGCTCTGCGGCAAACGGATACGATGGCGCGCCAGGGCATTGCCGCCG CCACCGCGCTGACCATGCTGCCGCAGGTCGAACCGGGCAAGACGATCAATGTCGCGGTCGGCGTGGCGCGCTTCGCCGGT CAGTCGGGCATGGCGTTCGGCGCAAGCGCGCACGTGACAACCAACGGCATTCTGAAACTGGGCATCGGCGTCTCGGGCCA GAACAAGACGTATGGTGTCGGATATGGATACAGCTGGTGA
Upstream 100 bases:
>100_bases GCGTCGAGCATAAGATCAAGTCTGTCGGCAGCTATCAATTCCGTCTGGCTTCCATCGACTTCGACGGACATCGTTCCGAT GTCGTCTGGAGGTGCAGGGC
Downstream 100 bases:
>100_bases TCGATACTTCTCACGCCACGCCGAGCCACGGCGCTGACCGGCGCCTGACCGTCGGCATTTCGCTGTTCGCGAGGAACGGC CAGGCGATCTGGGAGAACGG
Product: membrane-anchored cell surface protein
Products: NA
Alternate protein names: Membrane-Anchored Cell Surface Protein; Hemagluttinin Domain-Containing Protein; Hemagglutinin Family Protein; Haemagluttinin Family Protein; Adhesin; YadA Domain Protein; Haemagglutinin-Related Autotransporter Protein; Outer Membrane Protein; Haemagluttinin Domain Protein; Haemagglutinin; Autotransporter Adhesin; Haemagglutinin Family Protein; Surface Protein; YadA-Like C-Terminal Region Protein; Surface-Exposed Protein; Hep_Hag Family; Hemagglutinin Domain-Containing Protein; YadA C-Terminal Domain Protein; Hep_Hag Family Protein; Autotransporter; Hemagluttinin Motif-Containing Protein; Surface-Exposed Adhesin Protein; Membrane-Anchored Cell Surface Protein Haemagluttinin; Hemagglutinin; Haemagglutinin And Invasin Like Cell Surface Protein; Intracellular Motility Protein A; Hemagglutinin-Related Protein; YadA-Like C-Terminal Domain-Containing; Hemagluttinin Family Protein; Inner Membrane Protein; Peptide Transport System Permease SapB; Haemagglutinin/Invasin; YadA/Haemagluttinin Like Protein; Hemaglutinin/Autotransporter Like Protein; Exported Adhesin; Hemagluttinin Like Protein; Haemagglutinin Adhesin; Hemagluttinin Domain Protein; Outer Membrane Protein Autotransporter And Adhesin; Outer Membrane Protein Haemagluttinin-Like
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MNRAYRSIWNEALGAWVAASELCSTQGKANKSSIPKVGRVSARIPLVFALGFVLGESAMANNLAVGDDAKNMIGYAVSRT KNGYETLAGGDDTNANTAVGTSATANGGRSTAIGDTATATGFHSVAIGADSKATGNGSVAVGNDSTDDAQSNVFSVGNRE TQRRIINIAPGDVSSTSTDAINGSQLYSLSTSTSTGLSSAISSIGSLSTSISTSIGSLSTGLSTTNNYIASLSSGVTNID NTLNELSTAINNNTTRSLSSGGYAADMSSPAAQAPSVTAGSNSVALGQGSNDDGRSNVVSVGSASQQRQLTNVAPGTQGT DAVNLNQLSALSTSMSQSFAGQQNQINTLGTQITQTQQALRQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAG QSGMAFGASAHVTTNGILKLGIGVSGQNKTYGVGYGYSW
Sequences:
>Translated_439_residues MNRAYRSIWNEALGAWVAASELCSTQGKANKSSIPKVGRVSARIPLVFALGFVLGESAMANNLAVGDDAKNMIGYAVSRT KNGYETLAGGDDTNANTAVGTSATANGGRSTAIGDTATATGFHSVAIGADSKATGNGSVAVGNDSTDDAQSNVFSVGNRE TQRRIINIAPGDVSSTSTDAINGSQLYSLSTSTSTGLSSAISSIGSLSTSISTSIGSLSTGLSTTNNYIASLSSGVTNID NTLNELSTAINNNTTRSLSSGGYAADMSSPAAQAPSVTAGSNSVALGQGSNDDGRSNVVSVGSASQQRQLTNVAPGTQGT DAVNLNQLSALSTSMSQSFAGQQNQINTLGTQITQTQQALRQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAG QSGMAFGASAHVTTNGILKLGIGVSGQNKTYGVGYGYSW >Mature_439_residues MNRAYRSIWNEALGAWVAASELCSTQGKANKSSIPKVGRVSARIPLVFALGFVLGESAMANNLAVGDDAKNMIGYAVSRT KNGYETLAGGDDTNANTAVGTSATANGGRSTAIGDTATATGFHSVAIGADSKATGNGSVAVGNDSTDDAQSNVFSVGNRE TQRRIINIAPGDVSSTSTDAINGSQLYSLSTSTSTGLSSAISSIGSLSTSISTSIGSLSTGLSTTNNYIASLSSGVTNID NTLNELSTAINNNTTRSLSSGGYAADMSSPAAQAPSVTAGSNSVALGQGSNDDGRSNVVSVGSASQQRQLTNVAPGTQGT DAVNLNQLSALSTSMSQSFAGQQNQINTLGTQITQTQQALRQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAG QSGMAFGASAHVTTNGILKLGIGVSGQNKTYGVGYGYSW
Specific function: Unknown
COG id: COG5295
COG function: function code UW; Autotransporter adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44220; Mature: 44220
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRAYRSIWNEALGAWVAASELCSTQGKANKSSIPKVGRVSARIPLVFALGFVLGESAMA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH NNLAVGDDAKNMIGYAVSRTKNGYETLAGGDDTNANTAVGTSATANGGRSTAIGDTATAT CCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFHSVAIGADSKATGNGSVAVGNDSTDDAQSNVFSVGNRETQRRIINIAPGDVSSTSTDA CCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHEECCCCCCCCEEEEECCCCCCCCCCCC INGSQLYSLSTSTSTGLSSAISSIGSLSTSISTSIGSLSTGLSTTNNYIASLSSGVTNID CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH NTLNELSTAINNNTTRSLSSGGYAADMSSPAAQAPSVTAGSNSVALGQGSNDDGRSNVVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCEEE VGSASQQRQLTNVAPGTQGTDAVNLNQLSALSTSMSQSFAGQQNQINTLGTQITQTQQAL CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAGQSGMAFGASAHVTTNGILKL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCCCCCEECCCCEEECCCEEEE GIGVSGQNKTYGVGYGYSW EECCCCCCCEEEECCCCCC >Mature Secondary Structure MNRAYRSIWNEALGAWVAASELCSTQGKANKSSIPKVGRVSARIPLVFALGFVLGESAMA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH NNLAVGDDAKNMIGYAVSRTKNGYETLAGGDDTNANTAVGTSATANGGRSTAIGDTATAT CCCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFHSVAIGADSKATGNGSVAVGNDSTDDAQSNVFSVGNRETQRRIINIAPGDVSSTSTDA CCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHEECCCCCCCCEEEEECCCCCCCCCCCC INGSQLYSLSTSTSTGLSSAISSIGSLSTSISTSIGSLSTGLSTTNNYIASLSSGVTNID CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHH NTLNELSTAINNNTTRSLSSGGYAADMSSPAAQAPSVTAGSNSVALGQGSNDDGRSNVVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCEEE VGSASQQRQLTNVAPGTQGTDAVNLNQLSALSTSMSQSFAGQQNQINTLGTQITQTQQAL CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH RQTDTMARQGIAAATALTMLPQVEPGKTINVAVGVARFAGQSGMAFGASAHVTTNGILKL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCCCCCEECCCCEEECCCEEEE GIGVSGQNKTYGVGYGYSW EECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA