| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238023605
Identifier: 238023605
GI number: 238023605
Start: 115607
End: 118165
Strand: Reverse
Name: 238023605
Synonym: bglu_2g01090
Alternate gene names: NA
Gene position: 118165-115607 (Counterclockwise)
Preceding gene: 238023606
Following gene: 238023604
Centisome position: 4.18
GC content: 59.52
Gene sequence:
>2559_bases ATGCCAGATGAAATCGTAGCGATTGCAGCCACGTGCTTTACCAACGTTCACTTGAGAATGGACGGCGGCGGGGTCACCCA TGCCGTCGATGTCGGCGCGGGCACCGTCAACTGCCAGTATGGCGTCGGTCCATACGAAAAATTCTGCCTGCATCGTCAGT CCAACGGAACGGTCACGATCGAGTCGATGCAATTCCCCGGCGTCTTCCTGCGCCTCGATGGTAACGGCGTCACGCAGCCC GCAGGCTCCGGTGCGGGGATCGTCAACTGCCAATTCGGTGCTGGACCGTGGGAGCAGTTCTATTTCCACCAGCAATCTGA CGGAACGGTGACCATCGAATCGGCTGCATTTCCAGGCGTCTTTCTCCGACTCGACGGAAGTGGCGTGACGCAACCTATCG ATGCCGGCGCCGGCACCGTCAATTGCCAGTTCGGTGCAGGGCCTTATGAACACTATCGCCTGCTCCCCCAAGGGCAGCGG GTCATGGGCGATATCGAACACATCGTTGTGCTGATGCTGGAAAACCGCTCGTTCGACGGGATGCTGGGCTGGCTCTACGA GCACGACGCCCCGGCTGTCAACATCCCTCCGGCGACGGCAGACGACACGTTTCGCGGCCTGCAGGGCGTCGATCTGTCAA CCTTCACCAATCGGGCAGATTATGGCCTGTCTTCACCGCCCTCGCGCGGCGCGGCCGGATTCACGGTGCCGAGCATCACG CCCGGCGAAGAGTTCAAGAACGTCAACATGCAGTTCTTTGGAACCGAGACGCCAACCGCCGGCGCCAAGGCAACCATGAC GGGTGTCTTGCAGGATTTCGTCAATACGATGCAGCATCATCATTACGGCCAGAGCGACATTGAAGCGAATGCCGGCATGG TTATGCAAAGCTATACGCCGGGCCAGCTCCCGGTCATGAACCAGTTGGCACGGCACTACGCCGTCTGCGACGATTGGTTT GCCTCGGTGCCGTCGCAGACCAATCCCAACCGCGCATTCTTGATGACAGGCAGTTCGCACGGGCTCGTCAATAACGGTCA ACTGGAAATCGATCCCCAAGCCAAAGAGCTGGAGAAAGTGCTGGGCATGGGCATCGGCGACGATCGTTTCCCGGAGGACA CGATCTTCAACGCTCTCGCCTCCGCGAATACGGATTGGGCGGTGTTCTGGCAAAGCAGCTATCTGCCGCACAAGATTTCT GCTCTGCTCAATAACCTGCCGCGGCTGGCGTTGCTGACCAGACTGATGAACCCAGTCCTTTCCACCGCGCTCCAGGTTCT GCTGGCGGCACTCAAGCCGTATACGCAATACATCAATTCGATGGCTTCCGGCGAGCTGACGTCCAACTACACGTGGCGCC TGTTCCCGGCCATTCATAAAATTTCCGGCGCCGATCGCCACTTTAAGTCAGTGGATCAATTCCACGCGCTGGCGCGCTCC GGCAATTTGCCGAAATTCAGTTACATCGAGCCATCGTGGACGATAGCCGAAACCTCCACGGACGGCGGGCTGAAGAACCT GCTGACGCAAATGGGCAACGACTATCACCCGCCGGGCAACATGATTGTCGCCGAGAATTTCGTGAAAGACGTGTACAGCA GCCTCATCGCGAATCAGGCGGCTTGGAACAAGACACTGCTGGTGATCACTTTCGACGAGTTTGTTGGCTCTTTCGACCAT GTAGCTCCCCCGGCGGCCGTGCCGCCCTGGGGCGCGGCCAAACCCGACTTCACGACCAACGGCTTCGGTTTCGACCGCTT CGGCGCACGCGTCCCGACTCTGCTCGTGTCCCCGCTGGTGCAGAAGGGCACCGTATTCCGCTCCCCCACATCAACGCCGT ACGATCATACGTCCATCCTGGCAACCACCCTGAAATGGCTCGGGCAGGCAGACCAGGCCGCGTCTTTCGGCGAGCGGACC CGCCACGCTCCTACCTTCGACAACGTCGTCACGTTGAAGCAGCCCCGCACCGATGCTGCCGATATCGGCTTTCTCAAGGT AGCGCGCAAGATCGGCGATCCGGTCCAGTACGGCGACCCTATCCTACTGAAGAACCAGCACGGAAACTATGTGACGCTTT CCCAAAGCGCTACCAAGGTTTCCTCCGGCCTACCCGACGGCGATCTGATGCATTTCGCGATCGATCTCAATCTCGCCGCG CACTTTCCGACGCTGGGCAGCGGCAACAAGGCCGTGCTGACATTGCGCACCCCCCAAGCCGATCCTCCCGCCCAGATCGA CGACGGGTCGAGCTTGTTCATCGTCACGCTGGAAGCCGAGGTCGGTGGTGCGAATTTCCTCGGCGCCTGGTCGGATTCGC ACGACTGCTACTACTACAACATGTATGTTCAGGGATCTTACATGGCTAACGAAACATGGATCGTCAAGCAAGCTGACAGA CATGGCCAGGGGCTGAAATACGGCGACAGGGTGTATTTCGAAAACGCCCATTTCGGGGGCCAGCGGCTATCGCAGGACTC GCGGCCGTTCCAGGGTACCTGGATTTCTACCACGTCGGGCCACGGCGACTACTGGACGATCGAACCTGCGGTGAGCTGA
Upstream 100 bases:
>100_bases CTCCGTGGCGCTCCGGCTTCATGCACTTCGTATTAGGCCGATTCGCTACCAATCGATTTTCGCAGGCACTGCCTTACACC AGGAACCAGGAAAAATCACC
Downstream 100 bases:
>100_bases CCGCAGGCAGTGATATGGCGGGAGCGGTGCGTGGCGCGCATGATTCGGCGTCTCACGAAGCGAAGTGTTACAACCACCGC TCCCTCAAGCTCGGCATTGA
Product: phosphoesterase family protein
Products: NA
Alternate protein names: Phosphoesterase Family Protein; Phosphoesterase; Phosphoesterase Protein; Phospholipase
Number of amino acids: Translated: 852; Mature: 851
Protein sequence:
>852_residues MPDEIVAIAATCFTNVHLRMDGGGVTHAVDVGAGTVNCQYGVGPYEKFCLHRQSNGTVTIESMQFPGVFLRLDGNGVTQP AGSGAGIVNCQFGAGPWEQFYFHQQSDGTVTIESAAFPGVFLRLDGSGVTQPIDAGAGTVNCQFGAGPYEHYRLLPQGQR VMGDIEHIVVLMLENRSFDGMLGWLYEHDAPAVNIPPATADDTFRGLQGVDLSTFTNRADYGLSSPPSRGAAGFTVPSIT PGEEFKNVNMQFFGTETPTAGAKATMTGVLQDFVNTMQHHHYGQSDIEANAGMVMQSYTPGQLPVMNQLARHYAVCDDWF ASVPSQTNPNRAFLMTGSSHGLVNNGQLEIDPQAKELEKVLGMGIGDDRFPEDTIFNALASANTDWAVFWQSSYLPHKIS ALLNNLPRLALLTRLMNPVLSTALQVLLAALKPYTQYINSMASGELTSNYTWRLFPAIHKISGADRHFKSVDQFHALARS GNLPKFSYIEPSWTIAETSTDGGLKNLLTQMGNDYHPPGNMIVAENFVKDVYSSLIANQAAWNKTLLVITFDEFVGSFDH VAPPAAVPPWGAAKPDFTTNGFGFDRFGARVPTLLVSPLVQKGTVFRSPTSTPYDHTSILATTLKWLGQADQAASFGERT RHAPTFDNVVTLKQPRTDAADIGFLKVARKIGDPVQYGDPILLKNQHGNYVTLSQSATKVSSGLPDGDLMHFAIDLNLAA HFPTLGSGNKAVLTLRTPQADPPAQIDDGSSLFIVTLEAEVGGANFLGAWSDSHDCYYYNMYVQGSYMANETWIVKQADR HGQGLKYGDRVYFENAHFGGQRLSQDSRPFQGTWISTTSGHGDYWTIEPAVS
Sequences:
>Translated_852_residues MPDEIVAIAATCFTNVHLRMDGGGVTHAVDVGAGTVNCQYGVGPYEKFCLHRQSNGTVTIESMQFPGVFLRLDGNGVTQP AGSGAGIVNCQFGAGPWEQFYFHQQSDGTVTIESAAFPGVFLRLDGSGVTQPIDAGAGTVNCQFGAGPYEHYRLLPQGQR VMGDIEHIVVLMLENRSFDGMLGWLYEHDAPAVNIPPATADDTFRGLQGVDLSTFTNRADYGLSSPPSRGAAGFTVPSIT PGEEFKNVNMQFFGTETPTAGAKATMTGVLQDFVNTMQHHHYGQSDIEANAGMVMQSYTPGQLPVMNQLARHYAVCDDWF ASVPSQTNPNRAFLMTGSSHGLVNNGQLEIDPQAKELEKVLGMGIGDDRFPEDTIFNALASANTDWAVFWQSSYLPHKIS ALLNNLPRLALLTRLMNPVLSTALQVLLAALKPYTQYINSMASGELTSNYTWRLFPAIHKISGADRHFKSVDQFHALARS GNLPKFSYIEPSWTIAETSTDGGLKNLLTQMGNDYHPPGNMIVAENFVKDVYSSLIANQAAWNKTLLVITFDEFVGSFDH VAPPAAVPPWGAAKPDFTTNGFGFDRFGARVPTLLVSPLVQKGTVFRSPTSTPYDHTSILATTLKWLGQADQAASFGERT RHAPTFDNVVTLKQPRTDAADIGFLKVARKIGDPVQYGDPILLKNQHGNYVTLSQSATKVSSGLPDGDLMHFAIDLNLAA HFPTLGSGNKAVLTLRTPQADPPAQIDDGSSLFIVTLEAEVGGANFLGAWSDSHDCYYYNMYVQGSYMANETWIVKQADR HGQGLKYGDRVYFENAHFGGQRLSQDSRPFQGTWISTTSGHGDYWTIEPAVS >Mature_851_residues PDEIVAIAATCFTNVHLRMDGGGVTHAVDVGAGTVNCQYGVGPYEKFCLHRQSNGTVTIESMQFPGVFLRLDGNGVTQPA GSGAGIVNCQFGAGPWEQFYFHQQSDGTVTIESAAFPGVFLRLDGSGVTQPIDAGAGTVNCQFGAGPYEHYRLLPQGQRV MGDIEHIVVLMLENRSFDGMLGWLYEHDAPAVNIPPATADDTFRGLQGVDLSTFTNRADYGLSSPPSRGAAGFTVPSITP GEEFKNVNMQFFGTETPTAGAKATMTGVLQDFVNTMQHHHYGQSDIEANAGMVMQSYTPGQLPVMNQLARHYAVCDDWFA SVPSQTNPNRAFLMTGSSHGLVNNGQLEIDPQAKELEKVLGMGIGDDRFPEDTIFNALASANTDWAVFWQSSYLPHKISA LLNNLPRLALLTRLMNPVLSTALQVLLAALKPYTQYINSMASGELTSNYTWRLFPAIHKISGADRHFKSVDQFHALARSG NLPKFSYIEPSWTIAETSTDGGLKNLLTQMGNDYHPPGNMIVAENFVKDVYSSLIANQAAWNKTLLVITFDEFVGSFDHV APPAAVPPWGAAKPDFTTNGFGFDRFGARVPTLLVSPLVQKGTVFRSPTSTPYDHTSILATTLKWLGQADQAASFGERTR HAPTFDNVVTLKQPRTDAADIGFLKVARKIGDPVQYGDPILLKNQHGNYVTLSQSATKVSSGLPDGDLMHFAIDLNLAAH FPTLGSGNKAVLTLRTPQADPPAQIDDGSSLFIVTLEAEVGGANFLGAWSDSHDCYYYNMYVQGSYMANETWIVKQADRH GQGLKYGDRVYFENAHFGGQRLSQDSRPFQGTWISTTSGHGDYWTIEPAVS
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92587; Mature: 92456
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDEIVAIAATCFTNVHLRMDGGGVTHAVDVGAGTVNCQYGVGPYEKFCLHRQSNGTVTI CCCHHEEEEEEHEEEEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHEEECCCCCEEE ESMQFPGVFLRLDGNGVTQPAGSGAGIVNCQFGAGPWEQFYFHQQSDGTVTIESAAFPGV EEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHEEEECCCCEEEEECCCCCEE FLRLDGSGVTQPIDAGAGTVNCQFGAGPYEHYRLLPQGQRVMGDIEHIVVLMLENRSFDG EEEECCCCCCCCCCCCCCEEEEEECCCCHHHEEECCCCCHHHHHHCEEEEEEECCCCCCC MLGWLYEHDAPAVNIPPATADDTFRGLQGVDLSTFTNRADYGLSSPPSRGAAGFTVPSIT CEEEEEECCCCEEECCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGEEFKNVNMQFFGTETPTAGAKATMTGVLQDFVNTMQHHHYGQSDIEANAGMVMQSYTP CCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC GQLPVMNQLARHYAVCDDWFASVPSQTNPNRAFLMTGSSHGLVNNGQLEIDPQAKELEKV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEECCEEEECCCHHHHHHH LGMGIGDDRFPEDTIFNALASANTDWAVFWQSSYLPHKISALLNNLPRLALLTRLMNPVL HCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHH STALQVLLAALKPYTQYINSMASGELTSNYTWRLFPAIHKISGADRHFKSVDQFHALARS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHC GNLPKFSYIEPSWTIAETSTDGGLKNLLTQMGNDYHPPGNMIVAENFVKDVYSSLIANQA CCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCC AWNKTLLVITFDEFVGSFDHVAPPAAVPPWGAAKPDFTTNGFGFDRFGARVPTLLVSPLV CCCCEEEEEEEHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH QKGTVFRSPTSTPYDHTSILATTLKWLGQADQAASFGERTRHAPTFDNVVTLKQPRTDAA HCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCH DIGFLKVARKIGDPVQYGDPILLKNQHGNYVTLSQSATKVSSGLPDGDLMHFAIDLNLAA HHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCHHHHHCCCCCCCEEEEEEEEEEEE HFPTLGSGNKAVLTLRTPQADPPAQIDDGSSLFIVTLEAEVGGANFLGAWSDSHDCYYYN CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCEEEEE MYVQGSYMANETWIVKQADRHGQGLKYGDRVYFENAHFGGQRLSQDSRPFQGTWISTTSG EEEEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCEEEEECCC HGDYWTIEPAVS CCCEEEECCCCC >Mature Secondary Structure PDEIVAIAATCFTNVHLRMDGGGVTHAVDVGAGTVNCQYGVGPYEKFCLHRQSNGTVTI CCHHEEEEEEHEEEEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHEEECCCCCEEE ESMQFPGVFLRLDGNGVTQPAGSGAGIVNCQFGAGPWEQFYFHQQSDGTVTIESAAFPGV EEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHEEEECCCCEEEEECCCCCEE FLRLDGSGVTQPIDAGAGTVNCQFGAGPYEHYRLLPQGQRVMGDIEHIVVLMLENRSFDG EEEECCCCCCCCCCCCCCEEEEEECCCCHHHEEECCCCCHHHHHHCEEEEEEECCCCCCC MLGWLYEHDAPAVNIPPATADDTFRGLQGVDLSTFTNRADYGLSSPPSRGAAGFTVPSIT CEEEEEECCCCEEECCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC PGEEFKNVNMQFFGTETPTAGAKATMTGVLQDFVNTMQHHHYGQSDIEANAGMVMQSYTP CCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC GQLPVMNQLARHYAVCDDWFASVPSQTNPNRAFLMTGSSHGLVNNGQLEIDPQAKELEKV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEECCEEEECCCHHHHHHH LGMGIGDDRFPEDTIFNALASANTDWAVFWQSSYLPHKISALLNNLPRLALLTRLMNPVL HCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHH STALQVLLAALKPYTQYINSMASGELTSNYTWRLFPAIHKISGADRHFKSVDQFHALARS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHC GNLPKFSYIEPSWTIAETSTDGGLKNLLTQMGNDYHPPGNMIVAENFVKDVYSSLIANQA CCCCEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCC AWNKTLLVITFDEFVGSFDHVAPPAAVPPWGAAKPDFTTNGFGFDRFGARVPTLLVSPLV CCCCEEEEEEEHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH QKGTVFRSPTSTPYDHTSILATTLKWLGQADQAASFGERTRHAPTFDNVVTLKQPRTDAA HCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCH DIGFLKVARKIGDPVQYGDPILLKNQHGNYVTLSQSATKVSSGLPDGDLMHFAIDLNLAA HHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCHHHHHCCCCCCCEEEEEEEEEEEE HFPTLGSGNKAVLTLRTPQADPPAQIDDGSSLFIVTLEAEVGGANFLGAWSDSHDCYYYN CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCEEEEE MYVQGSYMANETWIVKQADRHGQGLKYGDRVYFENAHFGGQRLSQDSRPFQGTWISTTSG EEEEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCEEEEECCC HGDYWTIEPAVS CCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA