| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is eutR [H]
Identifier: 238023581
GI number: 238023581
Start: 86887
End: 87831
Strand: Reverse
Name: eutR [H]
Synonym: bglu_2g00840
Alternate gene names: 238023581
Gene position: 87831-86887 (Counterclockwise)
Preceding gene: 238023582
Following gene: 238023580
Centisome position: 3.11
GC content: 67.62
Gene sequence:
>945_bases ATGAACCTGCACGCCGAAACCCTGTGCTTCTCGGATGTGTTCCTCCATTCCCAAGCGATCGCGAACTGGGCGCAGCACTA CGACCAGATCAGCCCCGGTGCCGCGACGACCACGCTGCGCCAGGTCGCCGGGCAGCGTTTTCACGTCTTTCGCGAACGCA TCAACCAGCGCGTGATGCAGCACGGTCTGGCGCCGCGCGACCGGCTCTGCTTCGCACTGCCGATCGCCAAAGCGAGCGCG CCCGTGGTCCAGGGGCGCGCCGTCGAGCGCCCGAGCCTGCTGACCCTGCGCGGCGGCGAGGAGTTCGTCGCCCATCTGCC GTGCGACACCGAGGTGCTGGCCTTCACCATCGACCGCACGCTCACGGCCGATCGTGAACTGGACGAACTCGCCAACCTGC CGGCGCGCATCCTGAAGCAGCCGGTATTGCCGATCTCGCCGGCACGCTACGGCAACGCGCTCGCCGGCCTCGAGCGCGTG CTTTGCCAAGCGCTCGAGGCCGGCTCGCTCACCGCACGCGATGCGTTCGACGAACGCGTGCTCGCGCACGGGGTGGTCGA CATCCTGCTCGATCTCGTGCAGTCCGACGATCCCGGCCCCGGAGCGCTGCCGTCGGCCTCGACGCAAAGCTACATCGTTC GCCGCAGCCAGGAAATCGCGCTGGAACGCGACGACGTACCCACGGTGATCGATCTCTGCCGCCACCTGCGCATCAGCCGC CGCACCCTTCAATACAGCTTCCAGAACGTGGTCGGCACGACGCCGACCGCCTACCTGCGCTCGATCCGGCTGAACGCCGT GCGGCGCTTCCTCATGACGACGCCCGAGACGTTGCGCATCGGCGATGCGGCGGCGCAGTTCGGCTTTTGCCACTTCGGGC GCTTCTCCGCGTACTACCACCAGCATTTCCACGAACTGCCCTCGCACACGCCACGCCTGAGCTGA
Upstream 100 bases:
>100_bases ATGATCCGGCGCGCATGGCGCGAGCGCGCCGCCCGCGCACGGGCGGCATGCGCCGGCTTCGGCCGGCACTGAATTCGAGA CGGGATGCACCAGCCACACC
Downstream 100 bases:
>100_bases GCCCGCGAGCGGCGCACGGCGGCGTCGGGTCGGGGTAATCCCCTGCCGCCGCGGTGCGTGCGGATTGCCGATAACGGACA ACGCGCCTGATTTCGGCAAC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Ethanolamine operon regulatory protein [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNLHAETLCFSDVFLHSQAIANWAQHYDQISPGAATTTLRQVAGQRFHVFRERINQRVMQHGLAPRDRLCFALPIAKASA PVVQGRAVERPSLLTLRGGEEFVAHLPCDTEVLAFTIDRTLTADRELDELANLPARILKQPVLPISPARYGNALAGLERV LCQALEAGSLTARDAFDERVLAHGVVDILLDLVQSDDPGPGALPSASTQSYIVRRSQEIALERDDVPTVIDLCRHLRISR RTLQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTTPETLRIGDAAAQFGFCHFGRFSAYYHQHFHELPSHTPRLS
Sequences:
>Translated_314_residues MNLHAETLCFSDVFLHSQAIANWAQHYDQISPGAATTTLRQVAGQRFHVFRERINQRVMQHGLAPRDRLCFALPIAKASA PVVQGRAVERPSLLTLRGGEEFVAHLPCDTEVLAFTIDRTLTADRELDELANLPARILKQPVLPISPARYGNALAGLERV LCQALEAGSLTARDAFDERVLAHGVVDILLDLVQSDDPGPGALPSASTQSYIVRRSQEIALERDDVPTVIDLCRHLRISR RTLQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTTPETLRIGDAAAQFGFCHFGRFSAYYHQHFHELPSHTPRLS >Mature_314_residues MNLHAETLCFSDVFLHSQAIANWAQHYDQISPGAATTTLRQVAGQRFHVFRERINQRVMQHGLAPRDRLCFALPIAKASA PVVQGRAVERPSLLTLRGGEEFVAHLPCDTEVLAFTIDRTLTADRELDELANLPARILKQPVLPISPARYGNALAGLERV LCQALEAGSLTARDAFDERVLAHGVVDILLDLVQSDDPGPGALPSASTQSYIVRRSQEIALERDDVPTVIDLCRHLRISR RTLQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTTPETLRIGDAAAQFGFCHFGRFSAYYHQHFHELPSHTPRLS
Specific function: Activates the transcription of the eut operon. Also positively regulates its own transcription. Probably binds ethanolamine and vitamin B12 as effectors [H]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788778, Length=308, Percent_Identity=30.5194805194805, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 [H]
Pfam domain/function: PF00165 HTH_AraC [H]
EC number: NA
Molecular weight: Translated: 35022; Mature: 35022
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHAETLCFSDVFLHSQAIANWAQHYDQISPGAATTTLRQVAGQRFHVFRERINQRVMQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGLAPRDRLCFALPIAKASAPVVQGRAVERPSLLTLRGGEEFVAHLPCDTEVLAFTIDRT HCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCEEEEECCHHHEEECCCCCCEEEEEHHHH LTADRELDELANLPARILKQPVLPISPARYGNALAGLERVLCQALEAGSLTARDAFDERV HCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LAHGVVDILLDLVQSDDPGPGALPSASTQSYIVRRSQEIALERDDVPTVIDLCRHLRISR HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RTLQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTTPETLRIGDAAAQFGFCHFGRFSAYYH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHH QHFHELPSHTPRLS HHHHHCCCCCCCCC >Mature Secondary Structure MNLHAETLCFSDVFLHSQAIANWAQHYDQISPGAATTTLRQVAGQRFHVFRERINQRVMQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HGLAPRDRLCFALPIAKASAPVVQGRAVERPSLLTLRGGEEFVAHLPCDTEVLAFTIDRT HCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCCEEEEECCHHHEEECCCCCCEEEEEHHHH LTADRELDELANLPARILKQPVLPISPARYGNALAGLERVLCQALEAGSLTARDAFDERV HCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LAHGVVDILLDLVQSDDPGPGALPSASTQSYIVRRSQEIALERDDVPTVIDLCRHLRISR HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RTLQYSFQNVVGTTPTAYLRSIRLNAVRRFLMTTPETLRIGDAAAQFGFCHFGRFSAYYH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHH QHFHELPSHTPRLS HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8300522; 9205837; 9278503 [H]