| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023569
Identifier: 238023569
GI number: 238023569
Start: 73172
End: 74209
Strand: Direct
Name: 238023569
Synonym: bglu_2g00710
Alternate gene names: NA
Gene position: 73172-74209 (Clockwise)
Preceding gene: 238023568
Following gene: 238023570
Centisome position: 2.59
GC content: 70.42
Gene sequence:
>1038_bases ATGACCGCAACCGTACTGGTCGCCACCGCGGGGCAGGGCATCCTGCGCTCGAACGACGAGGGCAAGACCTGGCATCGTCT CGGGCTAGCCGAAGCGATCGAGTTCGACGGCATCGTGCGCGCGCTCGCGGTGGACCCCGCGACGCCGTCGCGCGTCTATG CCGGCGCGGATTCGGGGCTGTGCATCAGCGAGGATGGCGGCGCGCACTGGTTTCGCCCCGATAACTGCCTGAACGGGCAG ACGGTCTGGTCCATCGCGATCGACCCCGCGAACCCGGCGGTCATGTATGCCGGCACCGGCGCGCCGTCGCGCGCCGCGCT CTACAAGTCGAGCGACGCCGGCCTGACGTGGGCGAGAACGGCGCCCGAGCTTGCGGAGTTCTGCTCGGGCGTCAATCGTC CGCGGCTGCTGACGATCTGCGTGGACCCGGACGACAGCAACCAGGTGTGGTACGGCGTGGAGGAGGGGGGGGCATGGCGC AGCGGCGATGCCGGTGCGAGCTGGACGCGCGTGGATGGCCCCGGCACCGCGATCCGCAACAGCGACATTCATGCGATCGC CGTGCTGCCCGCCGCGCAGGGCCGGCCCAAGACCGCGGTGCTGCTGACGGTCAACGCGGTCTACGTGAGCGAGGACGAGG GCCGGACCTGGGACGGCAAGCTGTCGCGCGACCGCTTCGATGGGCTGTACTACACACGGACCGTGGTGCAACTGCCGCAG CCGGGAGGCGACCTGCTGATGGCGATCGGCGACGGCACGCCGGGGACCCGCAGCCGCATCTATCGCTCGACGGATCGCGG CCATGCGTGGCACGAGACCGAGCTGCGCACGCCGCCGAACTCCACGTTCTGGGCGTTCGGCGTGCATGCGGCCCGGCCGG CGCTCGTCTATGCGGGCACCAAGTACGGGCACCTGTTCCGTTCCAGCGACGCGGGCCGAAGCTGGACCAAGGAATGGCGC GATTTCAGCGAGATCACGGCGGTGGCGTGGACCCCGTTCGAGGCGCCGCTCGCCGCCCACGCGCAGTCGACACACTGA
Upstream 100 bases:
>100_bases GTTTCTCGCATCGCCGAAGTCCGGCGCAATCACCGGCGAGTCGATCGGCTGCGACGGCGGACTCACGCGCGGAATTTTTC TCTGACACAAGGAGCACTTC
Downstream 100 bases:
>100_bases GCGGAGCGAGCGATGACACCCTCCGATGTCCGGCAACGCGCCGAGCGCGCCAACGCGAGCGGCTTGCCGCTGCCGACCCC GCGCGTGCAGCGCACCCACC
Product: BNR repeat-containing glycosyl hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTATVLVATAGQGILRSNDEGKTWHRLGLAEAIEFDGIVRALAVDPATPSRVYAGADSGLCISEDGGAHWFRPDNCLNGQ TVWSIAIDPANPAVMYAGTGAPSRAALYKSSDAGLTWARTAPELAEFCSGVNRPRLLTICVDPDDSNQVWYGVEEGGAWR SGDAGASWTRVDGPGTAIRNSDIHAIAVLPAAQGRPKTAVLLTVNAVYVSEDEGRTWDGKLSRDRFDGLYYTRTVVQLPQ PGGDLLMAIGDGTPGTRSRIYRSTDRGHAWHETELRTPPNSTFWAFGVHAARPALVYAGTKYGHLFRSSDAGRSWTKEWR DFSEITAVAWTPFEAPLAAHAQSTH
Sequences:
>Translated_345_residues MTATVLVATAGQGILRSNDEGKTWHRLGLAEAIEFDGIVRALAVDPATPSRVYAGADSGLCISEDGGAHWFRPDNCLNGQ TVWSIAIDPANPAVMYAGTGAPSRAALYKSSDAGLTWARTAPELAEFCSGVNRPRLLTICVDPDDSNQVWYGVEEGGAWR SGDAGASWTRVDGPGTAIRNSDIHAIAVLPAAQGRPKTAVLLTVNAVYVSEDEGRTWDGKLSRDRFDGLYYTRTVVQLPQ PGGDLLMAIGDGTPGTRSRIYRSTDRGHAWHETELRTPPNSTFWAFGVHAARPALVYAGTKYGHLFRSSDAGRSWTKEWR DFSEITAVAWTPFEAPLAAHAQSTH >Mature_344_residues TATVLVATAGQGILRSNDEGKTWHRLGLAEAIEFDGIVRALAVDPATPSRVYAGADSGLCISEDGGAHWFRPDNCLNGQT VWSIAIDPANPAVMYAGTGAPSRAALYKSSDAGLTWARTAPELAEFCSGVNRPRLLTICVDPDDSNQVWYGVEEGGAWRS GDAGASWTRVDGPGTAIRNSDIHAIAVLPAAQGRPKTAVLLTVNAVYVSEDEGRTWDGKLSRDRFDGLYYTRTVVQLPQP GGDLLMAIGDGTPGTRSRIYRSTDRGHAWHETELRTPPNSTFWAFGVHAARPALVYAGTKYGHLFRSSDAGRSWTKEWRD FSEITAVAWTPFEAPLAAHAQSTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37184; Mature: 37052
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATVLVATAGQGILRSNDEGKTWHRLGLAEAIEFDGIVRALAVDPATPSRVYAGADSGL CCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCE CISEDGGAHWFRPDNCLNGQTVWSIAIDPANPAVMYAGTGAPSRAALYKSSDAGLTWART EEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEECC APELAEFCSGVNRPRLLTICVDPDDSNQVWYGVEEGGAWRSGDAGASWTRVDGPGTAIRN CHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEC SDIHAIAVLPAAQGRPKTAVLLTVNAVYVSEDEGRTWDGKLSRDRFDGLYYTRTVVQLPQ CCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHCCEEEEEEEEECCC PGGDLLMAIGDGTPGTRSRIYRSTDRGHAWHETELRTPPNSTFWAFGVHAARPALVYAGT CCCCEEEEECCCCCCHHHHEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEEECC KYGHLFRSSDAGRSWTKEWRDFSEITAVAWTPFEAPLAAHAQSTH CCCEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCHHCCCCCCC >Mature Secondary Structure TATVLVATAGQGILRSNDEGKTWHRLGLAEAIEFDGIVRALAVDPATPSRVYAGADSGL CEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCE CISEDGGAHWFRPDNCLNGQTVWSIAIDPANPAVMYAGTGAPSRAALYKSSDAGLTWART EEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEECC APELAEFCSGVNRPRLLTICVDPDDSNQVWYGVEEGGAWRSGDAGASWTRVDGPGTAIRN CHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEC SDIHAIAVLPAAQGRPKTAVLLTVNAVYVSEDEGRTWDGKLSRDRFDGLYYTRTVVQLPQ CCEEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHCCEEEEEEEEECCC PGGDLLMAIGDGTPGTRSRIYRSTDRGHAWHETELRTPPNSTFWAFGVHAARPALVYAGT CCCCEEEEECCCCCCHHHHEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEEECC KYGHLFRSSDAGRSWTKEWRDFSEITAVAWTPFEAPLAAHAQSTH CCCEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA