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The map label for this gene is nahR [H]

Identifier: 238023558

GI number: 238023558

Start: 62438

End: 63373

Strand: Reverse

Name: nahR [H]

Synonym: bglu_2g00600

Alternate gene names: 238023558

Gene position: 63373-62438 (Counterclockwise)

Preceding gene: 238023565

Following gene: 238023557

Centisome position: 2.24

GC content: 70.94

Gene sequence:

>936_bases
ATGCCCGAACTCGATTTCGAACTCGATCTGAACCTGATCCCCTACCTGGTGGCGCTCGACGAGGCGCGCAACGTGACCCG
CGCCGGCGATCTGCTGGGCGTGAGCCAGCCGCGCGTGAGCGCGGCGCTGGCGCGGCTGCGCGAGCACTTCGGCGATCCGC
TGTTCGTGCGCACCTCGCGCGGCATGGAGCCGACGCCGCGCGCGCTGGCGCTGGTGCCGGCCGCGCGCGACGCGCTCGCG
CAGATCCGGCGCGGCCTGGCCACGCCGCATGTGTTCGATCCGGCCGCCGCCACCGGCACCTTCTCGCTCGCGCTGTCCGA
TGTCGGCGAGATCGTGTTCCTGCCGAGGCTGCTGCAGGAGCTCGCGCGCCTGGCGCCGCACGCGAACCTGCGCTCGGTGT
CGCTGCCGCACACGGAAGTCGAACGCGGGCTGGAGGCCGGCGCGGTGGATCTCGCGGTGGGCTATTTCCCCGATCTCGGC
GGCAGCAACTTCTTCCAGCAGCGGCTGTTCTCGCACCGCTTCATCTGCCTGGCGCGGCGCGGGCATCCGCTCGCGGGCGC
GCCGCTCACGCTCGAGCAGTACCTCGCCTGCGGCCACGCGGTGGTGCGCGCCGAAGGGCGCAGCCAGGAGATACTCGAGC
AGCATCTGGCCAAGGCACGGCTGCACCGGCGCGCGGTGCTCGAGACCAGCCACTTCATGAGCCTGCCGTTCATCCTCGGC
CGCACCGACCTGATCGCCACCGTCCCGCATGCGATCGGCTATGCCTATGCCGCCGAGCACGCGTCGATCACGCTGCTCGA
GCCGCCGCTCGCGCTGCCGCGTTTCGATCTTCGCCAGCACTGGCATCGCAAGTTTCACAACGACCCGCGCACCAGCTGGC
TGCGCGGCGTGGTGGCGGGCCTCTTCAACGACGCGCTCGACGAATGGCCGAAATGA

Upstream 100 bases:

>100_bases
GGATGAATACGTTGTGGAGCGATTGTCGGTGCGACACCGACTATGCGGCAATGCCATTTTGGAGATATGGTTCATATCGA
TTTCCGATAATGCTCGCGCC

Downstream 100 bases:

>100_bases
AGCGGCGCGCGAGCGCGGCGCCGCCGAGCCGGCACACCCTGACGCGCCGCAAGCCGGTAGCCGGCGGCGGGGTCGCCAAA
AGCATGAAACAATGTCTGGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPELDFELDLNLIPYLVALDEARNVTRAGDLLGVSQPRVSAALARLREHFGDPLFVRTSRGMEPTPRALALVPAARDALA
QIRRGLATPHVFDPAAATGTFSLALSDVGEIVFLPRLLQELARLAPHANLRSVSLPHTEVERGLEAGAVDLAVGYFPDLG
GSNFFQQRLFSHRFICLARRGHPLAGAPLTLEQYLACGHAVVRAEGRSQEILEQHLAKARLHRRAVLETSHFMSLPFILG
RTDLIATVPHAIGYAYAAEHASITLLEPPLALPRFDLRQHWHRKFHNDPRTSWLRGVVAGLFNDALDEWPK

Sequences:

>Translated_311_residues
MPELDFELDLNLIPYLVALDEARNVTRAGDLLGVSQPRVSAALARLREHFGDPLFVRTSRGMEPTPRALALVPAARDALA
QIRRGLATPHVFDPAAATGTFSLALSDVGEIVFLPRLLQELARLAPHANLRSVSLPHTEVERGLEAGAVDLAVGYFPDLG
GSNFFQQRLFSHRFICLARRGHPLAGAPLTLEQYLACGHAVVRAEGRSQEILEQHLAKARLHRRAVLETSHFMSLPFILG
RTDLIATVPHAIGYAYAAEHASITLLEPPLALPRFDLRQHWHRKFHNDPRTSWLRGVVAGLFNDALDEWPK
>Mature_310_residues
PELDFELDLNLIPYLVALDEARNVTRAGDLLGVSQPRVSAALARLREHFGDPLFVRTSRGMEPTPRALALVPAARDALAQ
IRRGLATPHVFDPAAATGTFSLALSDVGEIVFLPRLLQELARLAPHANLRSVSLPHTEVERGLEAGAVDLAVGYFPDLGG
SNFFQQRLFSHRFICLARRGHPLAGAPLTLEQYLACGHAVVRAEGRSQEILEQHLAKARLHRRAVLETSHFMSLPFILGR
TDLIATVPHAIGYAYAAEHASITLLEPPLALPRFDLRQHWHRKFHNDPRTSWLRGVVAGLFNDALDEWPK

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=291, Percent_Identity=27.1477663230241, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790147, Length=309, Percent_Identity=23.9482200647249, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081766, Length=300, Percent_Identity=22.6666666666667, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34422; Mature: 34291

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELDFELDLNLIPYLVALDEARNVTRAGDLLGVSQPRVSAALARLREHFGDPLFVRTSR
CCCCCCEECCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECC
GMEPTPRALALVPAARDALAQIRRGLATPHVFDPAAATGTFSLALSDVGEIVFLPRLLQE
CCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARLAPHANLRSVSLPHTEVERGLEAGAVDLAVGYFPDLGGSNFFQQRLFSHRFICLARR
HHHHCCCCCCCCCCCCHHHHHCCHHCCHHHEEECCCCCCCCCHHHHHHHHHHHHEEEECC
GHPLAGAPLTLEQYLACGHAVVRAEGRSQEILEQHLAKARLHRRAVLETSHFMSLPFILG
CCCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RTDLIATVPHAIGYAYAAEHASITLLEPPLALPRFDLRQHWHRKFHNDPRTSWLRGVVAG
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LFNDALDEWPK
HHHHHHHHCCC
>Mature Secondary Structure 
PELDFELDLNLIPYLVALDEARNVTRAGDLLGVSQPRVSAALARLREHFGDPLFVRTSR
CCCCCEECCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECC
GMEPTPRALALVPAARDALAQIRRGLATPHVFDPAAATGTFSLALSDVGEIVFLPRLLQE
CCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARLAPHANLRSVSLPHTEVERGLEAGAVDLAVGYFPDLGGSNFFQQRLFSHRFICLARR
HHHHCCCCCCCCCCCCHHHHHCCHHCCHHHEEECCCCCCCCCHHHHHHHHHHHHEEEECC
GHPLAGAPLTLEQYLACGHAVVRAEGRSQEILEQHLAKARLHRRAVLETSHFMSLPFILG
CCCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RTDLIATVPHAIGYAYAAEHASITLLEPPLALPRFDLRQHWHRKFHNDPRTSWLRGVVAG
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LFNDALDEWPK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]