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The map label for this gene is 238023543

Identifier: 238023543

GI number: 238023543

Start: 48667

End: 48828

Strand: Direct

Name: 238023543

Synonym: bglu_2g00440

Alternate gene names: NA

Gene position: 48667-48828 (Clockwise)

Preceding gene: 238023542

Following gene: 238023545

Centisome position: 1.72

GC content: 58.64

Gene sequence:

>162_bases
ATGCTCTACTACGCCGCCGTATTCTTCGTGATCGCAATCGTTGCCGCATTCTTCGGGTTCGGCGGCATCGCCGCCGGTGC
CGCATCGATTGCCAAGATCCTGTTCTTCATCTTCCTGATCGTGTTCCTCGTCACCCTCGTGATGGGCGTGGTACGCCGGT
GA

Upstream 100 bases:

>100_bases
GACTTCGCCCACACGAAGGTCCGGGGCAAGCCGCGCCATAAGCACGACGCTTGATGCGCGGCAGGTCCGCGATTCGAATG
ACTTGAACAGGGAGGTAACC

Downstream 100 bases:

>100_bases
AGCAGGCCGCCGCCGCGCGCCCGCTGGGGCGGCGCGCGGCGGCGGCGCTGCAACGCGCGGCGCGGCCGGCTAGATGCCGA
GCCGCGCCGTTTTTCGTTGC

Product: RNA polymerase factor sigma-54

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MLYYAAVFFVIAIVAAFFGFGGIAAGAASIAKILFFIFLIVFLVTLVMGVVRR

Sequences:

>Translated_53_residues
MLYYAAVFFVIAIVAAFFGFGGIAAGAASIAKILFFIFLIVFLVTLVMGVVRR
>Mature_53_residues
MLYYAAVFFVIAIVAAFFGFGGIAAGAASIAKILFFIFLIVFLVTLVMGVVRR

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009760 [H]

Pfam domain/function: PF07043 DUF1328 [H]

EC number: NA

Molecular weight: Translated: 5707; Mature: 5707

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYYAAVFFVIAIVAAFFGFGGIAAGAASIAKILFFIFLIVFLVTLVMGVVRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLYYAAVFFVIAIVAAFFGFGGIAAGAASIAKILFFIFLIVFLVTLVMGVVRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA