Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237814470

Identifier: 237814470

GI number: 237814470

Start: 4088273

End: 4088641

Strand: Direct

Name: 237814470

Synonym: GBP346_A4268

Alternate gene names: NA

Gene position: 4088273-4088641 (Clockwise)

Preceding gene: 237814469

Following gene: 237814471

Centisome position: 99.75

GC content: 68.83

Gene sequence:

>369_bases
ATGTCGTGGAGTAAGGTCGCCTGCGCGCTGTTCGCCCTGTCGTTCCTCGGATGCGCGGGCGCGTCCGGCACGGCGGGCTC
GATCGACGCCGGCACGCAAGTGTGCCCGGTGCGGGCGCAAAGCCCGCTGCAATACGTCGACGTGTTCGACGGCGCGCCGA
GCGATCTCGCGACGCTGATTCCCGACGACGCCGGCGAGCGCGCAGGGCATTGGGGGCTCGGCTACGTGTACGACGCGGGG
CGCTACGTGACGATCCGCTGCAAGTACGCGGACGGCCGGACCAAGGACGTCAGGCTCGCCGAGCGCGTGAAGCGCTGCGA
TTATCGGATCGACGGCAAGAAGACGCTGCAGGTGACGTGCGCGAAGTGA

Upstream 100 bases:

>100_bases
GTGTACGACCAGTTCGTGACGCCGCCGACGCCGCAGCCGGTTCAGCAACGGCGCCTGCGCTGGGGCGCGCATGGTCGGTC
GAACAATGGGGATAACTTCT

Downstream 100 bases:

>100_bases
GCGTCGCGTGAGGCGGGCGGCATGCCGGGGGCGTTTTCGCGCGCGATGCGCGCGGCGCTCGGTGGGCAAGCCGCGTGGCG
GCTGGTTTTCCGAGTGGCGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERAGHWGLGYVYDAG
RYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTCAK

Sequences:

>Translated_122_residues
MSWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERAGHWGLGYVYDAG
RYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTCAK
>Mature_121_residues
SWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERAGHWGLGYVYDAGR
YVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTCAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13085; Mature: 12954

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLI
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHEEC
PDDAGERAGHWGLGYVYDAGRYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTC
CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHCCEEECCCEEEEEEE
AK
CC
>Mature Secondary Structure 
SWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHEEC
PDDAGERAGHWGLGYVYDAGRYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTC
CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHCCEEECCCEEEEEEE
AK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA