| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814470
Identifier: 237814470
GI number: 237814470
Start: 4088273
End: 4088641
Strand: Direct
Name: 237814470
Synonym: GBP346_A4268
Alternate gene names: NA
Gene position: 4088273-4088641 (Clockwise)
Preceding gene: 237814469
Following gene: 237814471
Centisome position: 99.75
GC content: 68.83
Gene sequence:
>369_bases ATGTCGTGGAGTAAGGTCGCCTGCGCGCTGTTCGCCCTGTCGTTCCTCGGATGCGCGGGCGCGTCCGGCACGGCGGGCTC GATCGACGCCGGCACGCAAGTGTGCCCGGTGCGGGCGCAAAGCCCGCTGCAATACGTCGACGTGTTCGACGGCGCGCCGA GCGATCTCGCGACGCTGATTCCCGACGACGCCGGCGAGCGCGCAGGGCATTGGGGGCTCGGCTACGTGTACGACGCGGGG CGCTACGTGACGATCCGCTGCAAGTACGCGGACGGCCGGACCAAGGACGTCAGGCTCGCCGAGCGCGTGAAGCGCTGCGA TTATCGGATCGACGGCAAGAAGACGCTGCAGGTGACGTGCGCGAAGTGA
Upstream 100 bases:
>100_bases GTGTACGACCAGTTCGTGACGCCGCCGACGCCGCAGCCGGTTCAGCAACGGCGCCTGCGCTGGGGCGCGCATGGTCGGTC GAACAATGGGGATAACTTCT
Downstream 100 bases:
>100_bases GCGTCGCGTGAGGCGGGCGGCATGCCGGGGGCGTTTTCGCGCGCGATGCGCGCGGCGCTCGGTGGGCAAGCCGCGTGGCG GCTGGTTTTCCGAGTGGCGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERAGHWGLGYVYDAG RYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTCAK
Sequences:
>Translated_122_residues MSWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERAGHWGLGYVYDAG RYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTCAK >Mature_121_residues SWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLIPDDAGERAGHWGLGYVYDAGR YVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTCAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13085; Mature: 12954
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLI CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHEEC PDDAGERAGHWGLGYVYDAGRYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTC CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHCCEEECCCEEEEEEE AK CC >Mature Secondary Structure SWSKVACALFALSFLGCAGASGTAGSIDAGTQVCPVRAQSPLQYVDVFDGAPSDLATLI CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCHHEEC PDDAGERAGHWGLGYVYDAGRYVTIRCKYADGRTKDVRLAERVKRCDYRIDGKKTLQVTC CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHCCEEECCCEEEEEEE AK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA