Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814450

Identifier: 237814450

GI number: 237814450

Start: 4068993

End: 4069385

Strand: Reverse

Name: 237814450

Synonym: GBP346_A4248

Alternate gene names: NA

Gene position: 4069385-4068993 (Counterclockwise)

Preceding gene: 237814451

Following gene: 237814449

Centisome position: 99.29

GC content: 67.94

Gene sequence:

>393_bases
ATGCGTACCCCTTACCAAATCGTCGCCGATCATTACGCGGCGTCCGACCGGCGCGATCCCGCCGCGATGATGGCCGACAT
CGCCCCGACGATCGAATGGACCGAGATGGCCGGCTTTCCGTGCGCGGGCACGTACCGCAGCGCGGACGAGATCGTCCGCA
ACGTGTTCCGGCGCCTCGGCGAAGAGTGGGACGGCTACACGTTCGCGCTCGACGCGCTGCACGACGCGGGCGACACGGTG
ATCGGCATCGGCCGCTACTCGGGCACTTACCGGCGGACCGGCAAGTCGTTCGCGTGCCGCGTCGCGCATGTGTGGCGCGT
CGATGCGGGCAAGATCGTGCGCTTCGAGCAGTTCACCGACACGCTGCTCGTCGCGCAGGCGATGCAGCCGTAA

Upstream 100 bases:

>100_bases
GGCGACGGCGCGATCGCGAACCGGCCGGCCGGCTCCTTCATCCGCAAACTGTCGCAGGCCGTCTATCCGGACGATGCGCA
ACCGATCTGAGGACCATACG

Downstream 100 bases:

>100_bases
GCGCCTTCGTCCGTTCGTTCAACCAACGCGTTTTTTTGTTTCGCACGAGATCTCCATGAACCTGGCCGCTCTTTCGACCC
AGCATCAACGCCAATCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFALDALHDAGDTV
IGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTDTLLVAQAMQP

Sequences:

>Translated_130_residues
MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFALDALHDAGDTV
IGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTDTLLVAQAMQP
>Mature_130_residues
MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFALDALHDAGDTV
IGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTDTLLVAQAMQP

Specific function: Unknown

COG id: COG3631

COG function: function code R; Ketosteroid isomerase-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14612; Mature: 14612

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLG
CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHC
EEWDGYTFALDALHDAGDTVIGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTD
CCCCCEEEEEECHHCCCCCEEEECCCCCCHHHCCCHHHEEEHHEEECCCCCEEEHHHHHH
TLLVAQAMQP
HHHHHHHCCC
>Mature Secondary Structure
MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLG
CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHC
EEWDGYTFALDALHDAGDTVIGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTD
CCCCCEEEEEECHHCCCCCEEEECCCCCCHHHCCCHHHEEEHHEEECCCCCEEEHHHHHH
TLLVAQAMQP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA