| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814450
Identifier: 237814450
GI number: 237814450
Start: 4068993
End: 4069385
Strand: Reverse
Name: 237814450
Synonym: GBP346_A4248
Alternate gene names: NA
Gene position: 4069385-4068993 (Counterclockwise)
Preceding gene: 237814451
Following gene: 237814449
Centisome position: 99.29
GC content: 67.94
Gene sequence:
>393_bases ATGCGTACCCCTTACCAAATCGTCGCCGATCATTACGCGGCGTCCGACCGGCGCGATCCCGCCGCGATGATGGCCGACAT CGCCCCGACGATCGAATGGACCGAGATGGCCGGCTTTCCGTGCGCGGGCACGTACCGCAGCGCGGACGAGATCGTCCGCA ACGTGTTCCGGCGCCTCGGCGAAGAGTGGGACGGCTACACGTTCGCGCTCGACGCGCTGCACGACGCGGGCGACACGGTG ATCGGCATCGGCCGCTACTCGGGCACTTACCGGCGGACCGGCAAGTCGTTCGCGTGCCGCGTCGCGCATGTGTGGCGCGT CGATGCGGGCAAGATCGTGCGCTTCGAGCAGTTCACCGACACGCTGCTCGTCGCGCAGGCGATGCAGCCGTAA
Upstream 100 bases:
>100_bases GGCGACGGCGCGATCGCGAACCGGCCGGCCGGCTCCTTCATCCGCAAACTGTCGCAGGCCGTCTATCCGGACGATGCGCA ACCGATCTGAGGACCATACG
Downstream 100 bases:
>100_bases GCGCCTTCGTCCGTTCGTTCAACCAACGCGTTTTTTTGTTTCGCACGAGATCTCCATGAACCTGGCCGCTCTTTCGACCC AGCATCAACGCCAATCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFALDALHDAGDTV IGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTDTLLVAQAMQP
Sequences:
>Translated_130_residues MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFALDALHDAGDTV IGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTDTLLVAQAMQP >Mature_130_residues MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFALDALHDAGDTV IGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTDTLLVAQAMQP
Specific function: Unknown
COG id: COG3631
COG function: function code R; Ketosteroid isomerase-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14612; Mature: 14612
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLG CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHC EEWDGYTFALDALHDAGDTVIGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTD CCCCCEEEEEECHHCCCCCEEEECCCCCCHHHCCCHHHEEEHHEEECCCCCEEEHHHHHH TLLVAQAMQP HHHHHHHCCC >Mature Secondary Structure MRTPYQIVADHYAASDRRDPAAMMADIAPTIEWTEMAGFPCAGTYRSADEIVRNVFRRLG CCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHC EEWDGYTFALDALHDAGDTVIGIGRYSGTYRRTGKSFACRVAHVWRVDAGKIVRFEQFTD CCCCCEEEEEECHHCCCCCEEEECCCCCCHHHCCCHHHEEEHHEEECCCCCEEEHHHHHH TLLVAQAMQP HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA