Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814448

Identifier: 237814448

GI number: 237814448

Start: 4065956

End: 4067215

Strand: Reverse

Name: 237814448

Synonym: GBP346_A4246

Alternate gene names: NA

Gene position: 4067215-4065956 (Counterclockwise)

Preceding gene: 237814449

Following gene: 237814447

Centisome position: 99.23

GC content: 67.94

Gene sequence:

>1260_bases
ATGAAGCCGCTTTCCCTCAACATGAAGCGCGCGCTTGCCGGCGCGTGCATCGGCGCCGCGGGATTTCTCGCGCAACAGGC
GGCGCTCGCGCAGAGCTGCGGGCTCGCGAACGGCAAGCCCGCGACGGGCGCGCCGATTCCGATCGGCGCGGTCGTCGGCA
AGACCGGCCCCGACGACTTCAGCTCGTCGGCACGCGCGGCCGCCGCGTATTTCAAGTGCGTGAACGCGAACGGCGGCATC
AACGGCCGGCCTGTCCAGTATCTCGTCGAAGACGATCAATGGAATCCGGAAACGGCGTCGCAGGTCGCCTCGAAGCTCGT
ACGCGACCGCAAGGTGCTCGCGCTCGCGGGCAACGCGAGCTTCGTCGAATGCGGCGCGAACGCGAAGTTCTACGAACAGG
AGAACGTGATCGCGATCGCCGGCGTCGGCGTGCCGCGCGAATGCTATTTCGCGCGCAACTACGCGCCGCTCAACATGGGG
CCGCGCCTGTCGATGACGGAGGCGGCGTTGTACGCGAAGCAGCAGTACAAGGCGACGCGGATGGTGTGCATCGCGCCGAA
CATCCCGAGCCTCGGCGCGTGGTCGTGCGAAGGGCCGGCGCTCTGGGGCAAGCGCAACGGCGTGAGCGTCGACACGATCG
TGATGGACCCCGACTCCGCCGATCCGACGTCGGTCGTGCTGCAGGCGGCGTCGAAGAATCCGCAGGCGATCCTGCTCGGG
CTGCCGAAAGGGCTGATGGTGCCGATCCTGTCGGCCGCCGAGCAGCAGAACCTCGGCCGGCGGATTCACTTCGTCTCGGC
GGCGTCCGGCTACGACCTCGGCGTGCCGAAGGCGATCGGCCCGTACTGGAAGGGCAATTTCGACGTGAACCTCGAGTTCC
AGCCGCTCGACGCGCAAACGCCGGACAACCGGAACTGGCTCGGGGTGATGGACAAGTACGGCGACAGGAAGGACCCGCGC
GACACGTTCTCGCAGGCGGGCTATCTGGCCGCGCGGCTCGTGACCGACACGCTGCTGAAACTGCCCGCGAACCAGCTCGA
TCGCGCGCACGTGACGGCCGCGCTGCGCGAGGTGAAGGACTTCCGCAGCGACATCCTGTGCGGCCCGTTCTACGTCGGCG
CGGGCGAGCGGCACAACGCGAACAACGCGGGCCGGATGGCGCAATCGACGGGCACGGGCTGGAAGACGGTGTCGACGTGC
CAGGCGGTCGACGATCCGCAACTCGCCGACATCCGCGCGGCCGAAAAGAAGATGCACTGA

Upstream 100 bases:

>100_bases
CGGCAACGCACGCCGAAGCAGCACCGAAGCATCCATGCAGCACCCGGGGGCGCGGCCCGCACGCGCGGCGCCGCGCCCCA
CGACAACATCAGGAGACACG

Downstream 100 bases:

>100_bases
CGCCATGAACGCGATCGACTTCGTTCCTTACCTGATCTCCGGGCTCGGCGTCGGCGCGGTGTACGCGCTGTCGGGCGTCG
GCCTCGTCGTGCTGTATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKPLSLNMKRALAGACIGAAGFLAQQAALAQSCGLANGKPATGAPIPIGAVVGKTGPDDFSSSARAAAAYFKCVNANGGI
NGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNASFVECGANAKFYEQENVIAIAGVGVPRECYFARNYAPLNMG
PRLSMTEAALYAKQQYKATRMVCIAPNIPSLGAWSCEGPALWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG
LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAQTPDNRNWLGVMDKYGDRKDPR
DTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKDFRSDILCGPFYVGAGERHNANNAGRMAQSTGTGWKTVSTC
QAVDDPQLADIRAAEKKMH

Sequences:

>Translated_419_residues
MKPLSLNMKRALAGACIGAAGFLAQQAALAQSCGLANGKPATGAPIPIGAVVGKTGPDDFSSSARAAAAYFKCVNANGGI
NGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNASFVECGANAKFYEQENVIAIAGVGVPRECYFARNYAPLNMG
PRLSMTEAALYAKQQYKATRMVCIAPNIPSLGAWSCEGPALWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG
LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAQTPDNRNWLGVMDKYGDRKDPR
DTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKDFRSDILCGPFYVGAGERHNANNAGRMAQSTGTGWKTVSTC
QAVDDPQLADIRAAEKKMH
>Mature_419_residues
MKPLSLNMKRALAGACIGAAGFLAQQAALAQSCGLANGKPATGAPIPIGAVVGKTGPDDFSSSARAAAAYFKCVNANGGI
NGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNASFVECGANAKFYEQENVIAIAGVGVPRECYFARNYAPLNMG
PRLSMTEAALYAKQQYKATRMVCIAPNIPSLGAWSCEGPALWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG
LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAQTPDNRNWLGVMDKYGDRKDPR
DTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKDFRSDILCGPFYVGAGERHNANNAGRMAQSTGTGWKTVSTC
QAVDDPQLADIRAAEKKMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44641; Mature: 44641

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLSLNMKRALAGACIGAAGFLAQQAALAQSCGLANGKPATGAPIPIGAVVGKTGPDDF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCC
SSSARAAAAYFKCVNANGGINGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNAS
CHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCC
FVECGANAKFYEQENVIAIAGVGVPRECYFARNYAPLNMGPRLSMTEAALYAKQQYKATR
EEEECCCCEEEECCCEEEEEECCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEE
MVCIAPNIPSLGAWSCEGPALWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG
EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEE
LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAQT
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
PDNRNWLGVMDKYGDRKDPRDTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKD
CCCCCEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FRSDILCGPFYVGAGERHNANNAGRMAQSTGTGWKTVSTCQAVDDPQLADIRAAEKKMH
HHHHCEECCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKPLSLNMKRALAGACIGAAGFLAQQAALAQSCGLANGKPATGAPIPIGAVVGKTGPDDF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCC
SSSARAAAAYFKCVNANGGINGRPVQYLVEDDQWNPETASQVASKLVRDRKVLALAGNAS
CHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCC
FVECGANAKFYEQENVIAIAGVGVPRECYFARNYAPLNMGPRLSMTEAALYAKQQYKATR
EEEECCCCEEEECCCEEEEEECCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEE
MVCIAPNIPSLGAWSCEGPALWGKRNGVSVDTIVMDPDSADPTSVVLQAASKNPQAILLG
EEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEE
LPKGLMVPILSAAEQQNLGRRIHFVSAASGYDLGVPKAIGPYWKGNFDVNLEFQPLDAQT
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
PDNRNWLGVMDKYGDRKDPRDTFSQAGYLAARLVTDTLLKLPANQLDRAHVTAALREVKD
CCCCCEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FRSDILCGPFYVGAGERHNANNAGRMAQSTGTGWKTVSTCQAVDDPQLADIRAAEKKMH
HHHHCEECCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA