Click here to switch to the map view.

The map label for this gene is 237814441

Identifier: 237814441

GI number: 237814441

Start: 4059622

End: 4060722

Strand: Direct

Name: 237814441

Synonym: GBP346_A4239

Alternate gene names: NA

Gene position: 4059622-4060722 (Clockwise)

Preceding gene: 237814440

Following gene: 237814442

Centisome position: 99.05

GC content: 66.58

Gene sequence:

>1101_bases
ATGAAGAAGTTTGCGGTAGCGGCGGCGGGCCTTGCCGTCGCGACGGGCGCGCACGCGTCCGACGGCAGCGTCACGCTGTT
CGGCCTGATCGATGCCGGCGTGTCGTACGTGTCGAACGAAGGCGGCAAGCGCAACGTGTATTTCGACGACGGCATCGCGG
TGCCGAATCTATGGGGGCTTCGGGGCACCGAGGATCTCGGCGGCGGCGCGAAGGCGATCTTCGAGCTGACGTCGCAATAC
GCGCTCGGCAACGGCGCCGCGCTGCCGACGCCGGGCTCGATGTTCTCGCGCACCGCGCTCGTCGGCCTCTGGAGCGAGCG
GCTCGGCAGCGTGACGCTCGGCCAGCAATACGACTTCATGACCGATTCGCTGACGTTCGGCTCGTTCGACGGTGCGTTCC
GCTACGGCGGCCTGTACAACTTCCGCCAGGGGCCGTTCTCGAAGCTCGGGATTCCCGACAATCCCACCGGCTCGTTCGAC
TTCGACCGGTTGGCGGGTTCGAGCCGCGTGCCGAACTCGGTCAAGTACACGAGCGCGAACCTGAACGGGCTCGTGTTCGG
CCTGATGTACGGTTTCGGCAATCAGGCGGGCGGCGGGCTCGCGGCGAACAGCACCGTCAGCGCCGGCCTCAAGTACGAGA
CGGGCAGTTTCGCGCTCGGCGCCGCCTATGTCGAAGTCAAGTATCCGCAGATGAACAACGGGCACGACGGGCTGCGCAAC
TGGGGGCTCGGCGCGCGTTATGCGCTGTCCGCGTTCGATCTGAACCTGCTGTACACGAACACGCGCAACACGCTGACGGG
CGCCGCGATCGACGTGATCCAGGCCGGCGTGCGCTACGTCGGCGCGCCGTGGACGATCGGCGCGAACTACGAGTACATGA
AGGGCAACGCGCAGCTCGATCGCAACTACGCGCATCAAGTCACGGCGGCCGCGCAGTATGCGCTGTCCAAGCGCACGTCC
GCGTACGTCGAGACCGTGTACCAGTACGCGGGCGGCAGCGCGGGCGCGCATGCGTGGATCAACGGCGTGATGGGGCCCGA
TGCGCAGTCGAGCTCGCGTTCGCAGTTTCTCGCGCGAATCGGCATGCTTACCCGTTTCTGA

Upstream 100 bases:

>100_bases
GAAAGATGCGCGCCGCACGCTGCTCCACACTCCGAGCCGGAGATCGACGGCGGCGCCCCGAGCGCCGCCGCGCATAACGA
CAACCCCAACGGAGACGACG

Downstream 100 bases:

>100_bases
CTGTCTCTCGGCCCCGCCGGCCGCCGCGGGCCGTTCGCCTTCGAGGCAGCGGGCGCGCGGCACGCGCGCCGGGCCGGCCG
GAGTTCGCCGGGTGCGCCGG

Product: outer membrane porin OpcP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKKFAVAAAGLAVATGAHASDGSVTLFGLIDAGVSYVSNEGGKRNVYFDDGIAVPNLWGLRGTEDLGGGAKAIFELTSQY
ALGNGAALPTPGSMFSRTALVGLWSERLGSVTLGQQYDFMTDSLTFGSFDGAFRYGGLYNFRQGPFSKLGIPDNPTGSFD
FDRLAGSSRVPNSVKYTSANLNGLVFGLMYGFGNQAGGGLAANSTVSAGLKYETGSFALGAAYVEVKYPQMNNGHDGLRN
WGLGARYALSAFDLNLLYTNTRNTLTGAAIDVIQAGVRYVGAPWTIGANYEYMKGNAQLDRNYAHQVTAAAQYALSKRTS
AYVETVYQYAGGSAGAHAWINGVMGPDAQSSSRSQFLARIGMLTRF

Sequences:

>Translated_366_residues
MKKFAVAAAGLAVATGAHASDGSVTLFGLIDAGVSYVSNEGGKRNVYFDDGIAVPNLWGLRGTEDLGGGAKAIFELTSQY
ALGNGAALPTPGSMFSRTALVGLWSERLGSVTLGQQYDFMTDSLTFGSFDGAFRYGGLYNFRQGPFSKLGIPDNPTGSFD
FDRLAGSSRVPNSVKYTSANLNGLVFGLMYGFGNQAGGGLAANSTVSAGLKYETGSFALGAAYVEVKYPQMNNGHDGLRN
WGLGARYALSAFDLNLLYTNTRNTLTGAAIDVIQAGVRYVGAPWTIGANYEYMKGNAQLDRNYAHQVTAAAQYALSKRTS
AYVETVYQYAGGSAGAHAWINGVMGPDAQSSSRSQFLARIGMLTRF
>Mature_366_residues
MKKFAVAAAGLAVATGAHASDGSVTLFGLIDAGVSYVSNEGGKRNVYFDDGIAVPNLWGLRGTEDLGGGAKAIFELTSQY
ALGNGAALPTPGSMFSRTALVGLWSERLGSVTLGQQYDFMTDSLTFGSFDGAFRYGGLYNFRQGPFSKLGIPDNPTGSFD
FDRLAGSSRVPNSVKYTSANLNGLVFGLMYGFGNQAGGGLAANSTVSAGLKYETGSFALGAAYVEVKYPQMNNGHDGLRN
WGLGARYALSAFDLNLLYTNTRNTLTGAAIDVIQAGVRYVGAPWTIGANYEYMKGNAQLDRNYAHQVTAAAQYALSKRTS
AYVETVYQYAGGSAGAHAWINGVMGPDAQSSSRSQFLARIGMLTRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38632; Mature: 38632

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFAVAAAGLAVATGAHASDGSVTLFGLIDAGVSYVSNEGGKRNVYFDDGIAVPNLWGL
CCCHHHHHHCHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
RGTEDLGGGAKAIFELTSQYALGNGAALPTPGSMFSRTALVGLWSERLGSVTLGQQYDFM
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCC
TDSLTFGSFDGAFRYGGLYNFRQGPFSKLGIPDNPTGSFDFDRLAGSSRVPNSVKYTSAN
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCC
LNGLVFGLMYGFGNQAGGGLAANSTVSAGLKYETGSFALGAAYVEVKYPQMNNGHDGLRN
CCCEEEEEHHCCCCCCCCCEECCCHHHCCEEECCCCEEEEEEEEEEECCCCCCCCCHHHH
WGLGARYALSAFDLNLLYTNTRNTLTGAAIDVIQAGVRYVGAPWTIGANYEYMKGNAQLD
CCCCHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCC
RNYAHQVTAAAQYALSKRTSAYVETVYQYAGGSAGAHAWINGVMGPDAQSSSRSQFLARI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHH
GMLTRF
HHHHCC
>Mature Secondary Structure
MKKFAVAAAGLAVATGAHASDGSVTLFGLIDAGVSYVSNEGGKRNVYFDDGIAVPNLWGL
CCCHHHHHHCHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
RGTEDLGGGAKAIFELTSQYALGNGAALPTPGSMFSRTALVGLWSERLGSVTLGQQYDFM
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCC
TDSLTFGSFDGAFRYGGLYNFRQGPFSKLGIPDNPTGSFDFDRLAGSSRVPNSVKYTSAN
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCC
LNGLVFGLMYGFGNQAGGGLAANSTVSAGLKYETGSFALGAAYVEVKYPQMNNGHDGLRN
CCCEEEEEHHCCCCCCCCCEECCCHHHCCEEECCCCEEEEEEEEEEECCCCCCCCCHHHH
WGLGARYALSAFDLNLLYTNTRNTLTGAAIDVIQAGVRYVGAPWTIGANYEYMKGNAQLD
CCCCHHEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCC
RNYAHQVTAAAQYALSKRTSAYVETVYQYAGGSAGAHAWINGVMGPDAQSSSRSQFLARI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHH
GMLTRF
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]