| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814411
Identifier: 237814411
GI number: 237814411
Start: 4031299
End: 4032090
Strand: Direct
Name: 237814411
Synonym: GBP346_A4209
Alternate gene names: NA
Gene position: 4031299-4032090 (Clockwise)
Preceding gene: 237814410
Following gene: 237814414
Centisome position: 98.36
GC content: 70.83
Gene sequence:
>792_bases ATGCCGATGACCTGGCCGATGCGCGTTCGGCGCGTCGCGCCGTGGATTCTCATCGGCGGTGTCGCGATTCTCGTCACGCT CGTCGCGCTGCTGCCCGCGTCCTGGGTGACGCCGCAGTTTGGGCGCGCGACGGGCGGCCACGTCAATCTCGTCGATCCCG ACGGCTCGCTCTGGCGCGGCTCGGCGACGCTGCTGCTCGCGCCCGGCGCGGACCGCAGCGCGTCGACGCTGTTGCCCGGC CGCGTCGAATGGCGCACGCAGTTCTGGCCGCTGTTCGCCGGACGCGTGCGGATGCGACTGCGCCAGACGGACGCGATGCC CGACGGCGTCACGCTCGATGCGACGCTGCGCGGCGCGGTGCTGTCGGCGGGCTCGATGGCGGTGCCGGCGTCGCTGCTCG CGGGGCTCGGCACGCCGTTCAACACGCTCGACCTGCAAGGCGACGTGCGGCTCGACTGGACCGACTGGCGGCTCTTCGGC AAGGACGCGTTCGGACAGCTCACGGTGACGATCACCGACATGAGCTCGCGCGTGTCGCGCGTGAAACCGCTCGGCTCGTA CCGTGCGGTGCTCGAGGCGCGCGGCGCGAATTCGACGCTCGATCTGTCGACGTCGAAAGGGCCGCTGATGATGTCGGGGC AAGGGAATTTCGGCGCGACGGGCGCGTCGTTTCGCGGCACCGCGAGCGCTGAGCCCGAACAGCGCGACAATCTCGCGGGC TTGCTGAACCTGCTCGGCCATCCGATCGGCAACGGCGCGGTATCGCTGATTTACGGCGACGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CGCTGAAGGAGGACGGCCAGGTCGATCTGACGGCGGTGCTGCAGCCGGCGTCGGTCAAGTGAGCGATGTCGATGCGCGAT ACGGCCGACGGAGCATGCGA
Downstream 100 bases:
>100_bases GGGCGAACGCGCGCCGGGCGCGGCGATCGACCGGCTCACGGTTTAGGCCTCACGCCTCACGCCTCACGCCCCACGCCCCA CGCCCCACGCCCCACGCCCC
Product: general secretory pathway protein N
Products: NA
Alternate protein names: General Secretory Pathway Protein N; Type II Secretion System Protein N; General Secretion Pathway Protein N
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPMTWPMRVRRVAPWILIGGVAILVTLVALLPASWVTPQFGRATGGHVNLVDPDGSLWRGSATLLLAPGADRSASTLLPG RVEWRTQFWPLFAGRVRMRLRQTDAMPDGVTLDATLRGAVLSAGSMAVPASLLAGLGTPFNTLDLQGDVRLDWTDWRLFG KDAFGQLTVTITDMSSRVSRVKPLGSYRAVLEARGANSTLDLSTSKGPLMMSGQGNFGATGASFRGTASAEPEQRDNLAG LLNLLGHPIGNGAVSLIYGDAAR
Sequences:
>Translated_263_residues MPMTWPMRVRRVAPWILIGGVAILVTLVALLPASWVTPQFGRATGGHVNLVDPDGSLWRGSATLLLAPGADRSASTLLPG RVEWRTQFWPLFAGRVRMRLRQTDAMPDGVTLDATLRGAVLSAGSMAVPASLLAGLGTPFNTLDLQGDVRLDWTDWRLFG KDAFGQLTVTITDMSSRVSRVKPLGSYRAVLEARGANSTLDLSTSKGPLMMSGQGNFGATGASFRGTASAEPEQRDNLAG LLNLLGHPIGNGAVSLIYGDAAR >Mature_262_residues PMTWPMRVRRVAPWILIGGVAILVTLVALLPASWVTPQFGRATGGHVNLVDPDGSLWRGSATLLLAPGADRSASTLLPGR VEWRTQFWPLFAGRVRMRLRQTDAMPDGVTLDATLRGAVLSAGSMAVPASLLAGLGTPFNTLDLQGDVRLDWTDWRLFGK DAFGQLTVTITDMSSRVSRVKPLGSYRAVLEARGANSTLDLSTSKGPLMMSGQGNFGATGASFRGTASAEPEQRDNLAGL LNLLGHPIGNGAVSLIYGDAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27923; Mature: 27791
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTWPMRVRRVAPWILIGGVAILVTLVALLPASWVTPQFGRATGGHVNLVDPDGSLWRG CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEC SATLLLAPGADRSASTLLPGRVEWRTQFWPLFAGRVRMRLRQTDAMPDGVTLDATLRGAV CEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHH LSAGSMAVPASLLAGLGTPFNTLDLQGDVRLDWTDWRLFGKDAFGQLTVTITDMSSRVSR CCCCCCHHHHHHHHHCCCCCCEEECCCCEEEEEHHEEEECCCCCCEEEEEEECCHHHHHH VKPLGSYRAVLEARGANSTLDLSTSKGPLMMSGQGNFGATGASFRGTASAEPEQRDNLAG HCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH LLNLLGHPIGNGAVSLIYGDAAR HHHHHCCCCCCCEEEEEECCCCC >Mature Secondary Structure PMTWPMRVRRVAPWILIGGVAILVTLVALLPASWVTPQFGRATGGHVNLVDPDGSLWRG CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEC SATLLLAPGADRSASTLLPGRVEWRTQFWPLFAGRVRMRLRQTDAMPDGVTLDATLRGAV CEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHH LSAGSMAVPASLLAGLGTPFNTLDLQGDVRLDWTDWRLFGKDAFGQLTVTITDMSSRVSR CCCCCCHHHHHHHHHCCCCCCEEECCCCEEEEEHHEEEECCCCCCEEEEEEECCHHHHHH VKPLGSYRAVLEARGANSTLDLSTSKGPLMMSGQGNFGATGASFRGTASAEPEQRDNLAG HCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH LLNLLGHPIGNGAVSLIYGDAAR HHHHHCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA