| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814410
Identifier: 237814410
GI number: 237814410
Start: 4030754
End: 4031260
Strand: Direct
Name: 237814410
Synonym: GBP346_A4208
Alternate gene names: NA
Gene position: 4030754-4031260 (Clockwise)
Preceding gene: 237814409
Following gene: 237814411
Centisome position: 98.35
GC content: 70.41
Gene sequence:
>507_bases ATGAAAACGACGGAGTTCAACGAAGCACTGAGCCAGTTCTGGGAAGCCCGCACCGCACGCGAAAAGTTGCTGCTCGGCTG GGGCGGCGCGGTGCTCGCGCTCGCGATCGCGTATTCGGTGTTATGGTCGCCCGCGCAGGAGGGCCGCGCGCGGATCCAGC GCGAGCTGCCGACGATGCGCCACGAGCTCGCCGAAATGACCGCGCAGGCGAACGAGGCGCGCTCGCTCGCGGGCGCCGCG CAGGGCGTCGCGCCGACGGGCGTCGCGTTGAAGGATGCGCTCGCCGCGTCGCTGTCCGATCACGGGCTCGCGGCGGCGGC GCCGCAGGTGGTCGGCGGCGGCGTGCAGATCCAGTTGAAGAACGCGTCGTTCCCCGCGTGGACGCAGTGGCTCGACGACG TGCGCCGCCAGTTCAAGGCGCAAGTCGTCGAAGCGCACGTGAGCGCGCTGAAGGAGGACGGCCAGGTCGATCTGACGGCG GTGCTGCAGCCGGCGTCGGTCAAGTGA
Upstream 100 bases:
>100_bases AGACCAAGGTCGACCCCGACTTCGCGCAGCGCCTCGCGCGCAACGGCCTCACGGGCGAGATCGACAGCAGCACGGGCAAA TGGACCATTCGGAGCCGATC
Downstream 100 bases:
>100_bases GCGATGTCGATGCGCGATACGGCCGACGGAGCATGCGAATGCCGATGACCTGGCCGATGCGCGTTCGGCGCGTCGCGCCG TGGATTCTCATCGGCGGTGT
Product: general secretory pathway protein M
Products: NA
Alternate protein names: General Secretion Pathway Protein M; General Secretory Pathway Protein M
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKTTEFNEALSQFWEARTAREKLLLGWGGAVLALAIAYSVLWSPAQEGRARIQRELPTMRHELAEMTAQANEARSLAGAA QGVAPTGVALKDALAASLSDHGLAAAAPQVVGGGVQIQLKNASFPAWTQWLDDVRRQFKAQVVEAHVSALKEDGQVDLTA VLQPASVK
Sequences:
>Translated_168_residues MKTTEFNEALSQFWEARTAREKLLLGWGGAVLALAIAYSVLWSPAQEGRARIQRELPTMRHELAEMTAQANEARSLAGAA QGVAPTGVALKDALAASLSDHGLAAAAPQVVGGGVQIQLKNASFPAWTQWLDDVRRQFKAQVVEAHVSALKEDGQVDLTA VLQPASVK >Mature_168_residues MKTTEFNEALSQFWEARTAREKLLLGWGGAVLALAIAYSVLWSPAQEGRARIQRELPTMRHELAEMTAQANEARSLAGAA QGVAPTGVALKDALAASLSDHGLAAAAPQVVGGGVQIQLKNASFPAWTQWLDDVRRQFKAQVVEAHVSALKEDGQVDLTA VLQPASVK
Specific function: Unknown
COG id: COG3149
COG function: function code U; Type II secretory pathway, component PulM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17940; Mature: 17940
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTEFNEALSQFWEARTAREKLLLGWGGAVLALAIAYSVLWSPAQEGRARIQRELPTMR CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HELAEMTAQANEARSLAGAAQGVAPTGVALKDALAASLSDHGLAAAAPQVVGGGVQIQLK HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCHHHHCCCEEEEEE NASFPAWTQWLDDVRRQFKAQVVEAHVSALKEDGQVDLTAVLQPASVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEECCCCCCC >Mature Secondary Structure MKTTEFNEALSQFWEARTAREKLLLGWGGAVLALAIAYSVLWSPAQEGRARIQRELPTMR CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH HELAEMTAQANEARSLAGAAQGVAPTGVALKDALAASLSDHGLAAAAPQVVGGGVQIQLK HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCHHHHCCCEEEEEE NASFPAWTQWLDDVRRQFKAQVVEAHVSALKEDGQVDLTAVLQPASVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA