| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is gspL
Identifier: 237814409
GI number: 237814409
Start: 4029348
End: 4030757
Strand: Direct
Name: gspL
Synonym: GBP346_A4207
Alternate gene names: NA
Gene position: 4029348-4030757 (Clockwise)
Preceding gene: 237814408
Following gene: 237814410
Centisome position: 98.31
GC content: 73.76
Gene sequence:
>1410_bases TTGCCGCCGCGCGAGCCGGCCGTGCCGTTGCAGGAATGGCAATGGCCCGAGCTGCCGTTCGCGCTCGTCGACAAGAGCGG CCACACGCAGCGCGCGGGCCGCGCGGCGCTCGCGCTGCTGCCTCAGGCGGCGACGACGGTGCTTATCGTCGCCGCGCGCG ACCTGCTGATGCTCGAGCAGGCGCTGCCTCCGCTGAAAGGGCCGAGGCTGAAGCAGGCGCTGCCGAACATCATCGAGGAT CAACTGATCCAGGATCCGCAGGGCTGCCACATCGCGGTCGATCCGGCGGCGCTCGACGGCGGGCGCCGCGTGCTCGCGGT GGTCGACCGCGCGTGGTTCAAGTTCATCGTCGACGCCTTCACCGCGGCCGGGCATCGCCATCTGCGCGCGGTGCCCGTCA CGCGCTGCCTGCCGCCCGCGACGCGCCGCGATGCGGCCGCGGCGGCCGAGACCGAGGCTGTCGCCGACGTCGCGCTCGAT CAGCCGGCGGGGCACGCCGCCGCGGCCGACGCGCCGGGCAGCGGCCACGCGGGCGCGACCGCGAACGCCCCGGCGCCGGC CGAGTCGATCGTCGCGGTCGCGCTCGGCCTCGCCGCGACGGAGCGCGCGCCGTCGCTCGCCGAGGAACCGGCGGCGCTGC TGCCGCAGGCGCCGAGCGCGCCGCGCGTCGAGCTCGCGCTCGCGCGCGGCGCGCTCGGCGAAGGCTTCGCCGCGCCGGTG TCGAGCGCGGTGGCGACGCTCGAAGCGCTCGCGAACGGCACGCCGCTCGAGCTCTACGAGCTCGGCGAGCCGGGTGCCGA GCCGCAGCTCGCTTCGGTGCGCCCGCTCGACGACAAGCGCTTGCTGCCGGGCGCCGCGATCTGGCCGTTCGACGCGCTCG TGCGCCGTGCGCTCGATTCGCGCTTCGACCTCTGCCAGTTCGAATTCGAGTTCGCGCCGTGGCGCTTCGACCGCGCGACG TTCATGCGCCTGCGCTTGCCGCTCGCGCTCGCGGCGACGACGCTCGCCATCGCGGTGATCGGCGCGAATGCGCACTGGTG GAAGCTCTCGCGCGAGCGCGACGCGCTCGCCGCGCAGATCACCGAGACGCTGCTCTCGACGTTTCCGAAGACGACGACGG TGCTCGATCCGGCCGCGCAGATGACGCGCCAGCTCGACCGGCTGCGGATCGCCGCGGGCGAGCTGTCGCCGAACGATTTC CTGTCGCTCGCGAGCGGCCTTGCGCGCTCGCTCGGCCCGCTGCCGCCGAACGGCATCGCATCGCTCGATTATCACGATCG CCGGCTCGACGTCGGCTTCAAGCCCGAGACCAAGGTCGACCCCGACTTCGCGCAGCGCCTCGCGCGCAACGGCCTCACGG GCGAGATCGACAGCAGCACGGGCAAATGGACCATTCGGAGCCGATCATGA
Upstream 100 bases:
>100_bases TCGTGATCCGACCACGCATACGACGCGCATCGTGCGCATCCGCGATCAGCTATAACAACGCCATTCGGGAGAGGAGCTCT TGAGCACGTTGATTGTCCTA
Downstream 100 bases:
>100_bases AAACGACGGAGTTCAACGAAGCACTGAGCCAGTTCTGGGAAGCCCGCACCGCACGCGAAAAGTTGCTGCTCGGCTGGGGC GGCGCGGTGCTCGCGCTCGC
Product: general secretion pathway protein L
Products: NA
Alternate protein names: General Secretion Pathway L; General Secretory Pathway Protein L; General Secretory Pathway L Transmembrane Protein; General Secretion Pathway L Protein; Type II Secretory Pathway Component PulL
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MPPREPAVPLQEWQWPELPFALVDKSGHTQRAGRAALALLPQAATTVLIVAARDLLMLEQALPPLKGPRLKQALPNIIED QLIQDPQGCHIAVDPAALDGGRRVLAVVDRAWFKFIVDAFTAAGHRHLRAVPVTRCLPPATRRDAAAAAETEAVADVALD QPAGHAAAADAPGSGHAGATANAPAPAESIVAVALGLAATERAPSLAEEPAALLPQAPSAPRVELALARGALGEGFAAPV SSAVATLEALANGTPLELYELGEPGAEPQLASVRPLDDKRLLPGAAIWPFDALVRRALDSRFDLCQFEFEFAPWRFDRAT FMRLRLPLALAATTLAIAVIGANAHWWKLSRERDALAAQITETLLSTFPKTTTVLDPAAQMTRQLDRLRIAAGELSPNDF LSLASGLARSLGPLPPNGIASLDYHDRRLDVGFKPETKVDPDFAQRLARNGLTGEIDSSTGKWTIRSRS
Sequences:
>Translated_469_residues MPPREPAVPLQEWQWPELPFALVDKSGHTQRAGRAALALLPQAATTVLIVAARDLLMLEQALPPLKGPRLKQALPNIIED QLIQDPQGCHIAVDPAALDGGRRVLAVVDRAWFKFIVDAFTAAGHRHLRAVPVTRCLPPATRRDAAAAAETEAVADVALD QPAGHAAAADAPGSGHAGATANAPAPAESIVAVALGLAATERAPSLAEEPAALLPQAPSAPRVELALARGALGEGFAAPV SSAVATLEALANGTPLELYELGEPGAEPQLASVRPLDDKRLLPGAAIWPFDALVRRALDSRFDLCQFEFEFAPWRFDRAT FMRLRLPLALAATTLAIAVIGANAHWWKLSRERDALAAQITETLLSTFPKTTTVLDPAAQMTRQLDRLRIAAGELSPNDF LSLASGLARSLGPLPPNGIASLDYHDRRLDVGFKPETKVDPDFAQRLARNGLTGEIDSSTGKWTIRSRS >Mature_468_residues PPREPAVPLQEWQWPELPFALVDKSGHTQRAGRAALALLPQAATTVLIVAARDLLMLEQALPPLKGPRLKQALPNIIEDQ LIQDPQGCHIAVDPAALDGGRRVLAVVDRAWFKFIVDAFTAAGHRHLRAVPVTRCLPPATRRDAAAAAETEAVADVALDQ PAGHAAAADAPGSGHAGATANAPAPAESIVAVALGLAATERAPSLAEEPAALLPQAPSAPRVELALARGALGEGFAAPVS SAVATLEALANGTPLELYELGEPGAEPQLASVRPLDDKRLLPGAAIWPFDALVRRALDSRFDLCQFEFEFAPWRFDRATF MRLRLPLALAATTLAIAVIGANAHWWKLSRERDALAAQITETLLSTFPKTTTVLDPAAQMTRQLDRLRIAAGELSPNDFL SLASGLARSLGPLPPNGIASLDYHDRRLDVGFKPETKVDPDFAQRLARNGLTGEIDSSTGKWTIRSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49901; Mature: 49770
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPREPAVPLQEWQWPELPFALVDKSGHTQRAGRAALALLPQAATTVLIVAARDLLMLEQ CCCCCCCCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPPLKGPRLKQALPNIIEDQLIQDPQGCHIAVDPAALDGGRRVLAVVDRAWFKFIVDAF HCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHH TAAGHRHLRAVPVTRCLPPATRRDAAAAAETEAVADVALDQPAGHAAAADAPGSGHAGAT HHCCCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC ANAPAPAESIVAVALGLAATERAPSLAEEPAALLPQAPSAPRVELALARGALGEGFAAPV CCCCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCEEEEEHHCCCCCCCHHHH SSAVATLEALANGTPLELYELGEPGAEPQLASVRPLDDKRLLPGAAIWPFDALVRRALDS HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC RFDLCQFEFEFAPWRFDRATFMRLRLPLALAATTLAIAVIGANAHWWKLSRERDALAAQI CCCEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHH TETLLSTFPKTTTVLDPAAQMTRQLDRLRIAAGELSPNDFLSLASGLARSLGPLPPNGIA HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCE SLDYHDRRLDVGFKPETKVDPDFAQRLARNGLTGEIDSSTGKWTIRSRS ECCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEECCC >Mature Secondary Structure PPREPAVPLQEWQWPELPFALVDKSGHTQRAGRAALALLPQAATTVLIVAARDLLMLEQ CCCCCCCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPPLKGPRLKQALPNIIEDQLIQDPQGCHIAVDPAALDGGRRVLAVVDRAWFKFIVDAF HCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHH TAAGHRHLRAVPVTRCLPPATRRDAAAAAETEAVADVALDQPAGHAAAADAPGSGHAGAT HHCCCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC ANAPAPAESIVAVALGLAATERAPSLAEEPAALLPQAPSAPRVELALARGALGEGFAAPV CCCCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCEEEEEHHCCCCCCCHHHH SSAVATLEALANGTPLELYELGEPGAEPQLASVRPLDDKRLLPGAAIWPFDALVRRALDS HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC RFDLCQFEFEFAPWRFDRATFMRLRLPLALAATTLAIAVIGANAHWWKLSRERDALAAQI CCCEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHHHHHHH TETLLSTFPKTTTVLDPAAQMTRQLDRLRIAAGELSPNDFLSLASGLARSLGPLPPNGIA HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCE SLDYHDRRLDVGFKPETKVDPDFAQRLARNGLTGEIDSSTGKWTIRSRS ECCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA