| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814402
Identifier: 237814402
GI number: 237814402
Start: 4025293
End: 4025703
Strand: Reverse
Name: 237814402
Synonym: GBP346_A4200
Alternate gene names: NA
Gene position: 4025703-4025293 (Counterclockwise)
Preceding gene: 237814412
Following gene: 237814397
Centisome position: 98.22
GC content: 71.53
Gene sequence:
>411_bases ATGAACGCGCTATCGATCCGGATCCTTTCCCTCGCCCTCTTCGCGGTACTCTGCGCGACGGCCACCTATTGGGTCGTCAC GCTCTCCGCGCATCAGGCTCCGCTACCCGCCGCCGCCGCCCGCACGCCGGTGCGCACGGAGGACGCCGCAGCGCTGTTCG GCGGCCAGCTCACCCGCAGTCCGGTGCAGGACATCCACCTGTTCGGCATCCTCGCGCTGCAGCGCGGCGCGGCGGCCATC GTCGGCATCGGCGGCGACGCGCCGCACGCGGTATCGCTCGGCAGCGAGATCGCGCAGGGCGCGAAGCTCGCCGAAGTGCG CGACCGCTCGATCATCGTCGAGCGCAACGGCGCGCGCTCCGAGATCTTCCTGCCCGCCAACACGCCGTCGCCGGCGATCT ACGTCCGCTGA
Upstream 100 bases:
>100_bases CGCGGCGCGAGCCGCGCGGCGTGAAGCCGCATTGTAAGGCGCGACTTGCTCCGGGCTTCCACTCAACGCAAATTTCACAT TCATCCGTACAATAGCGCGC
Downstream 100 bases:
>100_bases AGCCGAGCGCGCCGCTTCGCTTCGGCCGGCCCGCCGCCGCCGGCCGCGCCGGCCTTCCGTCACTGCACCATGTTGTTCAG CTCGATGATCGGCAGCATCA
Product: general secretion pathway protein C
Products: NA
Alternate protein names: General Secretion Pathway Protein C; General Secretion Pathway Related Transmembrane Protein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNALSIRILSLALFAVLCATATYWVVTLSAHQAPLPAAAARTPVRTEDAAALFGGQLTRSPVQDIHLFGILALQRGAAAI VGIGGDAPHAVSLGSEIAQGAKLAEVRDRSIIVERNGARSEIFLPANTPSPAIYVR
Sequences:
>Translated_136_residues MNALSIRILSLALFAVLCATATYWVVTLSAHQAPLPAAAARTPVRTEDAAALFGGQLTRSPVQDIHLFGILALQRGAAAI VGIGGDAPHAVSLGSEIAQGAKLAEVRDRSIIVERNGARSEIFLPANTPSPAIYVR >Mature_136_residues MNALSIRILSLALFAVLCATATYWVVTLSAHQAPLPAAAARTPVRTEDAAALFGGQLTRSPVQDIHLFGILALQRGAAAI VGIGGDAPHAVSLGSEIAQGAKLAEVRDRSIIVERNGARSEIFLPANTPSPAIYVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14165; Mature: 14165
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALSIRILSLALFAVLCATATYWVVTLSAHQAPLPAAAARTPVRTEDAAALFGGQLTRS CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHCCCCCCCCCHHHHHCCCCCCC PVQDIHLFGILALQRGAAAIVGIGGDAPHAVSLGSEIAQGAKLAEVRDRSIIVERNGARS CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHCCCCEEEEECCCCCC EIFLPANTPSPAIYVR EEEEECCCCCCEEEEC >Mature Secondary Structure MNALSIRILSLALFAVLCATATYWVVTLSAHQAPLPAAAARTPVRTEDAAALFGGQLTRS CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHCCCCCCCCCHHHHHCCCCCCC PVQDIHLFGILALQRGAAAIVGIGGDAPHAVSLGSEIAQGAKLAEVRDRSIIVERNGARS CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHCCCCEEEEECCCCCC EIFLPANTPSPAIYVR EEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA