| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814398
Identifier: 237814398
GI number: 237814398
Start: 4020022
End: 4020174
Strand: Direct
Name: 237814398
Synonym: GBP346_A4196
Alternate gene names: NA
Gene position: 4020022-4020174 (Clockwise)
Preceding gene: 237814395
Following gene: 237814399
Centisome position: 98.08
GC content: 44.44
Gene sequence:
>153_bases TTGCCAAGCACGTTTATACCGCATTATCGTGCCGATGCTTGCCGAAACTTCGCATGTGAAAACTTACGTGCGGCATACGC TGTCGATTTTTTTATGGCGGAAGTGAGACAGTTCTCGGTTCAATGTGATATTTCGGACATGAAAAACTGCTAA
Upstream 100 bases:
>100_bases ACGCGCTTTTCGCGCGACGGCGCTCCGGCCGCCCGTATCATACCTGCAACCGAACGGTTCGCCACGCGGGAGGCCATTCG GTTGGTTCGGACTACGGCGT
Downstream 100 bases:
>100_bases TGTCTGTTTTTTTGATCCTGACCTTACGTAATACCATCGGAAACGGCCGCCGCCGGCATCGATCCATTACTCCATGACAA GAACTCGCTTTGCTTTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MPSTFIPHYRADACRNFACENLRAAYAVDFFMAEVRQFSVQCDISDMKNC
Sequences:
>Translated_50_residues MPSTFIPHYRADACRNFACENLRAAYAVDFFMAEVRQFSVQCDISDMKNC >Mature_49_residues PSTFIPHYRADACRNFACENLRAAYAVDFFMAEVRQFSVQCDISDMKNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5785; Mature: 5653
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 14.0 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTFIPHYRADACRNFACENLRAAYAVDFFMAEVRQFSVQCDISDMKNC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC >Mature Secondary Structure PSTFIPHYRADACRNFACENLRAAYAVDFFMAEVRQFSVQCDISDMKNC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA