| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814295
Identifier: 237814295
GI number: 237814295
Start: 3917926
End: 3918633
Strand: Direct
Name: 237814295
Synonym: GBP346_A4091
Alternate gene names: NA
Gene position: 3917926-3918633 (Clockwise)
Preceding gene: 237814294
Following gene: 237814297
Centisome position: 95.59
GC content: 75.99
Gene sequence:
>708_bases ATGGGATACCACTTCGCCACCGCCGCGCTCGGCCCGTTGCTGCTCGCGCAGGGCCGCCACGTCAGGCGGGTGACGCCGCG CCTCGCCGAAGCCGACGGCCCGCGCGGCGGCGCCGACGGCGCCGGGCCGCCGTTGCGGCTGCTCGTGCTCGGCGATTCGG CCGCCGCCGGCGTCGGCGTTGCGAGCCAGTCCGACGCGCTCGCCGGGCAACTCGTGCGCGCGCTCGCGCCGTTCCATCGT GTCGAGTGGCGGTTACTCGCGCGCACCGGCGCGACGACGCAGGATCTGCTCGACTGGCTCGATGCCGAGCCCGACGCACG CTTCGACGCGGTCGTCACCTCGCTCGGCGTCAACGACGTGACGGACGGCGTGCCGCCCGCGCGCTGGCTCGACGCGCAGG CAGCGCTCGTCGAACGGCTGACGGCACGCTTCGGCGCGGCGCACGTGGTCCTGACCGCGGTGCCGCCGATGCATCGGTTC CCGGCGCTGCCGCAGCCGCTCAGGTGGTATCTCGGGCTGCGCGCGGCGCGCCTGAATGCCGCGCTGTCGCGCTGTCGCGC TGGGCCGCCGGGCGGCCCGCCTGCGAGTTCCTGCGGGTCGACATGCCGCTCACGCGTGACGCGATGGCCTCGGACGGCTT TCATCCGGGCACGCAGGCCTGCGCGGCATGGGCCGGACAGGCCGCCGCGGCGATCAGGCGGCGGGTAG
Upstream 100 bases:
>100_bases CAACCGCGCTCGCGCAGACGGCGACGCCCGATTGACCCGCGCGCGCCGCTATCATGAGCGCACACTTTCGATCTCGACGC CCGTCACCATGGAACGCCAT
Downstream 100 bases:
>100_bases CGGCGGCCACGCGCTTGCAGGCGGCGGTCGGCTAACGCGCGACGACAAACACGCTGCCGCCCGCGGTGCGCGCACCGGCG ATCCGTCGGCAATCGCCGCG
Product: lipolytic enzyme, G-D-S-L
Products: NA
Alternate protein names: GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; GDSL-Like Lipase/Acylhydrolase; Lysophospholipase; GDSL Family Lipase; Lipolytic Protein G-D-S-L Family; G-D-S-L Lipolytic Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MGYHFATAALGPLLLAQGRHVRRVTPRLAEADGPRGGADGAGPPLRLLVLGDSAAAGVGVASQSDALAGQLVRALAPFHR VEWRLLARTGATTQDLLDWLDAEPDARFDAVVTSLGVNDVTDGVPPARWLDAQAALVERLTARFGAAHVVLTAVPPMHRF PALPQPLRWYLGLRAARLNAALSRCRAGPPGGPPASSCGSTCRSRVTRWPRTAFIRARRPARHGPDRPPRRSGGG
Sequences:
>Translated_235_residues MGYHFATAALGPLLLAQGRHVRRVTPRLAEADGPRGGADGAGPPLRLLVLGDSAAAGVGVASQSDALAGQLVRALAPFHR VEWRLLARTGATTQDLLDWLDAEPDARFDAVVTSLGVNDVTDGVPPARWLDAQAALVERLTARFGAAHVVLTAVPPMHRF PALPQPLRWYLGLRAARLNAALSRCRAGPPGGPPASSCGSTCRSRVTRWPRTAFIRARRPARHGPDRPPRRSGGG >Mature_234_residues GYHFATAALGPLLLAQGRHVRRVTPRLAEADGPRGGADGAGPPLRLLVLGDSAAAGVGVASQSDALAGQLVRALAPFHRV EWRLLARTGATTQDLLDWLDAEPDARFDAVVTSLGVNDVTDGVPPARWLDAQAALVERLTARFGAAHVVLTAVPPMHRFP ALPQPLRWYLGLRAARLNAALSRCRAGPPGGPPASSCGSTCRSRVTRWPRTAFIRARRPARHGPDRPPRRSGGG
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24888; Mature: 24757
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYHFATAALGPLLLAQGRHVRRVTPRLAEADGPRGGADGAGPPLRLLVLGDSAAAGVGV CCCCHHHHHHHHHHHHCCCHHHHHCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC ASQSDALAGQLVRALAPFHRVEWRLLARTGATTQDLLDWLDAEPDARFDAVVTSLGVNDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCHH TDGVPPARWLDAQAALVERLTARFGAAHVVLTAVPPMHRFPALPQPLRWYLGLRAARLNA CCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHH ALSRCRAGPPGGPPASSCGSTCRSRVTRWPRTAFIRARRPARHGPDRPPRRSGGG HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GYHFATAALGPLLLAQGRHVRRVTPRLAEADGPRGGADGAGPPLRLLVLGDSAAAGVGV CCCHHHHHHHHHHHHCCCHHHHHCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCC ASQSDALAGQLVRALAPFHRVEWRLLARTGATTQDLLDWLDAEPDARFDAVVTSLGVNDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCHH TDGVPPARWLDAQAALVERLTARFGAAHVVLTAVPPMHRFPALPQPLRWYLGLRAARLNA CCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHH ALSRCRAGPPGGPPASSCGSTCRSRVTRWPRTAFIRARRPARHGPDRPPRRSGGG HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA