| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cheW [H]
Identifier: 237814245
GI number: 237814245
Start: 3873081
End: 3873608
Strand: Reverse
Name: cheW [H]
Synonym: GBP346_A4040
Alternate gene names: 237814245
Gene position: 3873608-3873081 (Counterclockwise)
Preceding gene: 237814246
Following gene: 237814244
Centisome position: 94.51
GC content: 63.64
Gene sequence:
>528_bases GTGTCCGAAGTCCAAACGAATCATCCGGCCGCGCCGAACGCGGCCAGCCGCCGCGACGCCGAACAGGGCGACGCCGCGGG CCAGGAGTTTCTCGTCTTCACGCTCGGCGACGAGGAATACGGCATCGACATTCTGAAAGTACAGGAAATCCGCGGCTACG ACAGCGTCACGCGGATCGCGAACGCGCCCGATTTCATCAAGGGCGTGATCAACCTGCGCGGCATCATCGTGCCGATCGTC GACATGCGGATCAAGTTCCACCTCGGCCGCGTCGAGTACGACCATCAGACGGTCGTGATCATCCTGAACGTCGCGCATCG CGTCGTCGGGATGGTCGTCGACGGCGTGTCCGACGTGCTCACGCTGTCGACCGAGCAGATCATGCCCGCGCCGGAATTCG GCGGCGTGCTGACGACCGAGTACCTGACGGGCCTCGGCACGGTCGACGGCCGGATGCTGATCCTGATGGACATCGAGAAG CTGATGACGAGCAAGGAGATGGCGCTGATCGAGACGCTCGGCGCATAA
Upstream 100 bases:
>100_bases CGCGGCGCTCAATCGCGAGACCCGCGCGGCGCACGGCGCGCATTCGAGCGCCGCGCTCGCCGCGTCCTAACTTACGTGAT CCATCGATCAGGGGGCTAAC
Downstream 100 bases:
>100_bases GCGGGCGCGACGCACGCAACGCAACTACGGGGAGCTGACGATGCTGCACAACTGGTCGATCCGCACGACGCTGACGGCCG TCGGATTCATGCTGGTGCTC
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSEVQTNHPAAPNAASRRDAEQGDAAGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIANAPDFIKGVINLRGIIVPIV DMRIKFHLGRVEYDHQTVVIILNVAHRVVGMVVDGVSDVLTLSTEQIMPAPEFGGVLTTEYLTGLGTVDGRMLILMDIEK LMTSKEMALIETLGA
Sequences:
>Translated_175_residues MSEVQTNHPAAPNAASRRDAEQGDAAGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIANAPDFIKGVINLRGIIVPIV DMRIKFHLGRVEYDHQTVVIILNVAHRVVGMVVDGVSDVLTLSTEQIMPAPEFGGVLTTEYLTGLGTVDGRMLILMDIEK LMTSKEMALIETLGA >Mature_174_residues SEVQTNHPAAPNAASRRDAEQGDAAGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIANAPDFIKGVINLRGIIVPIVD MRIKFHLGRVEYDHQTVVIILNVAHRVVGMVVDGVSDVLTLSTEQIMPAPEFGGVLTTEYLTGLGTVDGRMLILMDIEKL MTSKEMALIETLGA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=149, Percent_Identity=71.8120805369127, Blast_Score=219, Evalue=7e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 19110; Mature: 18979
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVQTNHPAAPNAASRRDAEQGDAAGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHC NAPDFIKGVINLRGIIVPIVDMRIKFHLGRVEYDHQTVVIILNVAHRVVGMVVDGVSDVL CCHHHHHHHHHHHHHEEEEEEEEEEEEECEEEECCCEEEEEEEHHHHHHHHHHHCHHHHH TLSTEQIMPAPEFGGVLTTEYLTGLGTVDGRMLILMDIEKLMTSKEMALIETLGA HCCHHHCCCCCCCCCEEHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEVQTNHPAAPNAASRRDAEQGDAAGQEFLVFTLGDEEYGIDILKVQEIRGYDSVTRIA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCHHHHHHC NAPDFIKGVINLRGIIVPIVDMRIKFHLGRVEYDHQTVVIILNVAHRVVGMVVDGVSDVL CCHHHHHHHHHHHHHEEEEEEEEEEEEECEEEECCCEEEEEEEHHHHHHHHHHHCHHHHH TLSTEQIMPAPEFGGVLTTEYLTGLGTVDGRMLILMDIEKLMTSKEMALIETLGA HCCHHHCCCCCCCCCEEHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]