| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cheZ [H]
Identifier: 237814239
GI number: 237814239
Start: 3866811
End: 3867521
Strand: Reverse
Name: cheZ [H]
Synonym: GBP346_A4034
Alternate gene names: 237814239
Gene position: 3867521-3866811 (Counterclockwise)
Preceding gene: 237814240
Following gene: 237814238
Centisome position: 94.36
GC content: 67.79
Gene sequence:
>711_bases ATGGCGGTTGCCGGCGCGAACGCCGGCGAACGCCTTGCCGACGCCGCCGATCTGGCGAGCGACCGTATTCTCGCGCGCAT CGGCCAGCTGACGCGCACGCTGCGCGATTCGATGCGCGAGCTGGGGCTCGACAAGCACGTCGAAAAGGCGGCGGAGGTCG TGCCGGACGCCCGCGACCGGCTGCGCTACGTTGTCGCGATGACCGAGCAGGCGGCCGAGCGCGTGCTGACCGCGATCGAG GTCGCGAAGCCCGTGCAGGAGCGCCTGCAGCAGGAGGCCGCCGCGCTCGACGCGCGCTGGGCGAAATGGTACGAGACGCC GATCGAGCGCGCGGAAGTGCGCGGCCTGATGGACGACACGCGCGCGTTCCTGCGCGCACTGCCGGACGCGACGGGCGCCA CCAACGCGCAGCTGCTCGAGATCATGCTCGCGCAGGACTTCCAGGATCTGACGGGCCAGGTGATCAAGAAGATCATGGAC ATGGTCTATCTGATCGAGCAGCAGCTGTTGAACGTGCTGGTCGAGAATATCGCGCCCGAGCGCCGCGAACAGTTCGCCGC GACGGCCGCCGCGCTCGCCGCCGAGCAGGCGGGCGGCGCAATGACGCCGGAATCGCTGCTCAATGGGCCGCAGATCAATC CGGAAGGAAAGACGGACGTTGTGCAGGATCAGGCGCAAGTCGACGATCTGTTAGCGAGTCTGGGTTTTTGA
Upstream 100 bases:
>100_bases GTCGTGAAACCGTTTACGGCGGCGACGCTCGACGAGAAGCTCAACAAGATTCTGGAAAAGATGGCGAAAGCGGGGAGCTG ACGTGAACGAGCCGATTGAT
Downstream 100 bases:
>100_bases GTCGAATTGTTTTGAAATGATTAAAATTATCGAGATCAGTGCCGATAGGTTTTTGACATAAGCTGCAGGCATACTACGCT CCTGATCGGCAGGCTCTTGA
Product: chemotaxis regulator CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAVAGANAGERLADAADLASDRILARIGQLTRTLRDSMRELGLDKHVEKAAEVVPDARDRLRYVVAMTEQAAERVLTAIE VAKPVQERLQQEAAALDARWAKWYETPIERAEVRGLMDDTRAFLRALPDATGATNAQLLEIMLAQDFQDLTGQVIKKIMD MVYLIEQQLLNVLVENIAPERREQFAATAAALAAEQAGGAMTPESLLNGPQINPEGKTDVVQDQAQVDDLLASLGF
Sequences:
>Translated_236_residues MAVAGANAGERLADAADLASDRILARIGQLTRTLRDSMRELGLDKHVEKAAEVVPDARDRLRYVVAMTEQAAERVLTAIE VAKPVQERLQQEAAALDARWAKWYETPIERAEVRGLMDDTRAFLRALPDATGATNAQLLEIMLAQDFQDLTGQVIKKIMD MVYLIEQQLLNVLVENIAPERREQFAATAAALAAEQAGGAMTPESLLNGPQINPEGKTDVVQDQAQVDDLLASLGF >Mature_235_residues AVAGANAGERLADAADLASDRILARIGQLTRTLRDSMRELGLDKHVEKAAEVVPDARDRLRYVVAMTEQAAERVLTAIEV AKPVQERLQQEAAALDARWAKWYETPIERAEVRGLMDDTRAFLRALPDATGATNAQLLEIMLAQDFQDLTGQVIKKIMDM VYLIEQQLLNVLVENIAPERREQFAATAAALAAEQAGGAMTPESLLNGPQINPEGKTDVVQDQAQVDDLLASLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=214, Percent_Identity=54.6728971962617, Blast_Score=206, Evalue=9e-55,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 25804; Mature: 25672
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAGANAGERLADAADLASDRILARIGQLTRTLRDSMRELGLDKHVEKAAEVVPDARDR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LRYVVAMTEQAAERVLTAIEVAKPVQERLQQEAAALDARWAKWYETPIERAEVRGLMDDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAFLRALPDATGATNAQLLEIMLAQDFQDLTGQVIKKIMDMVYLIEQQLLNVLVENIAPE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH RREQFAATAAALAAEQAGGAMTPESLLNGPQINPEGKTDVVQDQAQVDDLLASLGF HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVAGANAGERLADAADLASDRILARIGQLTRTLRDSMRELGLDKHVEKAAEVVPDARDR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LRYVVAMTEQAAERVLTAIEVAKPVQERLQQEAAALDARWAKWYETPIERAEVRGLMDDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAFLRALPDATGATNAQLLEIMLAQDFQDLTGQVIKKIMDMVYLIEQQLLNVLVENIAPE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH RREQFAATAAALAAEQAGGAMTPESLLNGPQINPEGKTDVVQDQAQVDDLLASLGF HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]