Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237814238

Identifier: 237814238

GI number: 237814238

Start: 3866110

End: 3866613

Strand: Reverse

Name: 237814238

Synonym: GBP346_A4033

Alternate gene names: NA

Gene position: 3866613-3866110 (Counterclockwise)

Preceding gene: 237814239

Following gene: 237814237

Centisome position: 94.34

GC content: 73.02

Gene sequence:

>504_bases
GTGAGATCGAGTCGATTTCGCCGGCTCGCCGCGACCGCGGCCGGCTTCATGTGCGCGTGGCTCGCCGCGCCGGCCCACGC
AGGCCTCGGCGGCGCGCCGATGACCCCGCCCGCCGGGGATACCGCCGCGACGGTGCGCTCGATACAGCGAAGCATCCGTG
CGGCGGGCGGCGCGTCGACGGCCGCCGTCGGCTATACGGTGCGCGAAACGACGCTCGGCTCGGGCACGGTCGTGCGCGAA
TACGTGTCGACGGCGGGTACCGTGTTCGCGCTGTCGTGGCAAGGCCCCGTCGCGCCGAATCTGTCCGATCTGCTCGGCGC
CTATTTTCCGCAATACGAGGCGGGCGTGAAGGCGTCGCGCGCCGCGCACGGGCCGCGCGCGCCCGCCGCGATCGACACGG
GCGGGCTCGTCGTCCACACGGGCGGCCACATGGGCTCGTATTCCGGTCAGGCATGGCTGCCGCAGGCGCTGCCGGCCGGC
TTCTCCACCAACGACATCCAGTGA

Upstream 100 bases:

>100_bases
TGAAAGCTTTCTTTTCGCTTTCGATTGTCGATAATGCGTGGCGCGTGTCCGTCGGACTCCCGCTGCCTGAATGCAGAGCC
TGAATTCGAGGAGGAATGGA

Downstream 100 bases:

>100_bases
TCGCGCCGGGAGGGGACAGATCTTGCGCTTCCAACACACTCTGACTCGCTGGCTCGGCGCGCTGAGTCTCGCCGCAGCCA
CGGCCGCGCTCGTCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGASTAAVGYTVRETTLGSGTVVRE
YVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASRAAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAG
FSTNDIQ

Sequences:

>Translated_167_residues
MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGASTAAVGYTVRETTLGSGTVVRE
YVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASRAAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAG
FSTNDIQ
>Mature_167_residues
MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGASTAAVGYTVRETTLGSGTVVRE
YVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASRAAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAG
FSTNDIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16929; Mature: 16929

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGAST
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AAVGYTVRETTLGSGTVVREYVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASR
HHEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCHHCCCCHHH
AAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAGFSTNDIQ
HCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGAST
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AAVGYTVRETTLGSGTVVREYVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASR
HHEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCHHCCCCHHH
AAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAGFSTNDIQ
HCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA