| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814238
Identifier: 237814238
GI number: 237814238
Start: 3866110
End: 3866613
Strand: Reverse
Name: 237814238
Synonym: GBP346_A4033
Alternate gene names: NA
Gene position: 3866613-3866110 (Counterclockwise)
Preceding gene: 237814239
Following gene: 237814237
Centisome position: 94.34
GC content: 73.02
Gene sequence:
>504_bases GTGAGATCGAGTCGATTTCGCCGGCTCGCCGCGACCGCGGCCGGCTTCATGTGCGCGTGGCTCGCCGCGCCGGCCCACGC AGGCCTCGGCGGCGCGCCGATGACCCCGCCCGCCGGGGATACCGCCGCGACGGTGCGCTCGATACAGCGAAGCATCCGTG CGGCGGGCGGCGCGTCGACGGCCGCCGTCGGCTATACGGTGCGCGAAACGACGCTCGGCTCGGGCACGGTCGTGCGCGAA TACGTGTCGACGGCGGGTACCGTGTTCGCGCTGTCGTGGCAAGGCCCCGTCGCGCCGAATCTGTCCGATCTGCTCGGCGC CTATTTTCCGCAATACGAGGCGGGCGTGAAGGCGTCGCGCGCCGCGCACGGGCCGCGCGCGCCCGCCGCGATCGACACGG GCGGGCTCGTCGTCCACACGGGCGGCCACATGGGCTCGTATTCCGGTCAGGCATGGCTGCCGCAGGCGCTGCCGGCCGGC TTCTCCACCAACGACATCCAGTGA
Upstream 100 bases:
>100_bases TGAAAGCTTTCTTTTCGCTTTCGATTGTCGATAATGCGTGGCGCGTGTCCGTCGGACTCCCGCTGCCTGAATGCAGAGCC TGAATTCGAGGAGGAATGGA
Downstream 100 bases:
>100_bases TCGCGCCGGGAGGGGACAGATCTTGCGCTTCCAACACACTCTGACTCGCTGGCTCGGCGCGCTGAGTCTCGCCGCAGCCA CGGCCGCGCTCGTCGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGASTAAVGYTVRETTLGSGTVVRE YVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASRAAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAG FSTNDIQ
Sequences:
>Translated_167_residues MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGASTAAVGYTVRETTLGSGTVVRE YVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASRAAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAG FSTNDIQ >Mature_167_residues MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGASTAAVGYTVRETTLGSGTVVRE YVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASRAAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAG FSTNDIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16929; Mature: 16929
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGAST CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC AAVGYTVRETTLGSGTVVREYVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASR HHEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCHHCCCCHHH AAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAGFSTNDIQ HCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure MRSSRFRRLAATAAGFMCAWLAAPAHAGLGGAPMTPPAGDTAATVRSIQRSIRAAGGAST CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC AAVGYTVRETTLGSGTVVREYVSTAGTVFALSWQGPVAPNLSDLLGAYFPQYEAGVKASR HHEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCHHCCCCHHH AAHGPRAPAAIDTGGLVVHTGGHMGSYSGQAWLPQALPAGFSTNDIQ HCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA