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The map label for this gene is yraN [C]

Identifier: 237814210

GI number: 237814210

Start: 3838935

End: 3839417

Strand: Reverse

Name: yraN [C]

Synonym: GBP346_A4005

Alternate gene names: 237814210

Gene position: 3839417-3838935 (Counterclockwise)

Preceding gene: 237814212

Following gene: 237814209

Centisome position: 93.68

GC content: 72.46

Gene sequence:

>483_bases
ATGACACGAAAGGCGCCCGCACGCGGCGCAAACGGAAGAAGCTCCGCATTGTGCCACGCGCGCGAGGCGAGCCTGGGAAC
GGGCGAACCCGAAGCCGCGCCGCGCGACAATTTTCCGAGGGAGGCCGGGTCCAAACGCGGGATCGGCGCCGCGTTCGAGA
CGCGTGCGCAGCGCTTTCTCGAGCGCGCGGGACTCGCGCTCGTCGCGCGCAACGTGACCGTGCGCGGCGGCGAGATCGAC
CTCGTGATGCGCGAGCGCGACGGCACGCTCGTGTTCGTCGAAGTGCGCGCACGCGCGAACAGCCGCTACGGCGGAGCGGC
GGCGAGCATCGGCGCGCGCAAGCGCATGCGGCTTCTTCTCGCGGCGCACGCGTTCTGGGCGCGCACGGGCGGCGCGAACG
CGTGCCGCTTCGACGTCGTCGCGTTCGAAGGCGGCCGGCTCGTGTGGCTGCGCGACGCGTTCCGTGCCGACGACGCGGGT
TAG

Upstream 100 bases:

>100_bases
GCGCAGTGTGATGTCGGCGGCGTTGCCGATCGGCGTCGCGACGATGTAGAGGGCGCCTGCCGGATAGTGCTGCGCCTGCG
CGAGATCGAGGAGGGAAGTC

Downstream 100 bases:

>100_bases
CCTGTGTCGAGATGTAAGGAGATGCGGCGACGCTCGGGCGGCGGGGGCGGAGTGCGGTAAACTCGCCGCACTCACGATGC
CGCGCGACGCAGACCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTRKAPARGANGRSSALCHAREASLGTGEPEAAPRDNFPREAGSKRGIGAAFETRAQRFLERAGLALVARNVTVRGGEID
LVMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACRFDVVAFEGGRLVWLRDAFRADDAG

Sequences:

>Translated_160_residues
MTRKAPARGANGRSSALCHAREASLGTGEPEAAPRDNFPREAGSKRGIGAAFETRAQRFLERAGLALVARNVTVRGGEID
LVMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACRFDVVAFEGGRLVWLRDAFRADDAG
>Mature_159_residues
TRKAPARGANGRSSALCHAREASLGTGEPEAAPRDNFPREAGSKRGIGAAFETRAQRFLERAGLALVARNVTVRGGEIDL
VMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACRFDVVAFEGGRLVWLRDAFRADDAG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=119, Percent_Identity=49.5798319327731, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 17184; Mature: 17053

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKAPARGANGRSSALCHAREASLGTGEPEAAPRDNFPREAGSKRGIGAAFETRAQRFL
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLL
HHCCEEEEEECEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
AAHAFWARTGGANACRFDVVAFEGGRLVWLRDAFRADDAG
HHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
TRKAPARGANGRSSALCHAREASLGTGEPEAAPRDNFPREAGSKRGIGAAFETRAQRFL
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLL
HHCCEEEEEECEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
AAHAFWARTGGANACRFDVVAFEGGRLVWLRDAFRADDAG
HHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA