| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814201
Identifier: 237814201
GI number: 237814201
Start: 3832795
End: 3833292
Strand: Direct
Name: 237814201
Synonym: GBP346_A3995
Alternate gene names: NA
Gene position: 3832795-3833292 (Clockwise)
Preceding gene: 237814200
Following gene: 237814204
Centisome position: 93.52
GC content: 67.87
Gene sequence:
>498_bases TTGTTAGGCTCGCGGCACGATCGGATTTTTCCTCAATCGTTTCGGCGCGCCGCCGCGCATCGGACCGACGCGAAACGCAT GGAATCCGGATGCGTTTTTTGCCGAACGACTCACCTTGGATCGCCCATGAAATCGACTCAGATTCTCGCCAGCTGCGCGC TCGTCGGCGCCGTGGCGGCGCTCGCCGGTTGCGCAGGCTCGCCCGCGAACGGCCCGCAGGCCGAATCGCCCAGCGGCCGG ATCATCTATGTCGCATCGCCGCGCAGCCCGCACGATGTCGAAAGCTGCCTGACGAGCCGCGTGTCGCAGGCGCGCGTCGC GCAGCGCAACCCGACGACGGTCCTGATCGGCCCGTACTCGGCCGATTCGGACTGGACCGTCACGCTCGCGCCTACCGCGT CGTCCGGCACGACCATCGGCGTCTATCGCCCGCGCAGCGGCGACGGGGATCCGGAGGAATCCGAGCTGCGCTTCCATATC GCGCGCTGCGCGGTCTGA
Upstream 100 bases:
>100_bases CATCGCGAACGGGTGTAGCGAACCGATCGCGGCAAAACGCCCGCGAACGGCACGACGCACGCGACTGAAAACAATTTTTA ACACAAACGATTCGCGTGCC
Downstream 100 bases:
>100_bases CACGCCTCGCACGCGGCGCGCCGACGTGCGCGTTCGCATTGAGATCGCGCGGCCGATTGGCGCTGCGCGATCGATGCTCT TTCCATACTCTTCCTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLGSRHDRIFPQSFRRAAAHRTDAKRMESGCVFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGR IIYVASPRSPHDVESCLTSRVSQARVAQRNPTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHI ARCAV
Sequences:
>Translated_165_residues MLGSRHDRIFPQSFRRAAAHRTDAKRMESGCVFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGR IIYVASPRSPHDVESCLTSRVSQARVAQRNPTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHI ARCAV >Mature_165_residues MLGSRHDRIFPQSFRRAAAHRTDAKRMESGCVFCRTTHLGSPMKSTQILASCALVGAVAALAGCAGSPANGPQAESPSGR IIYVASPRSPHDVESCLTSRVSQARVAQRNPTTVLIGPYSADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHI ARCAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17441; Mature: 17441
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSRHDRIFPQSFRRAAAHRTDAKRMESGCVFCRTTHLGSPMKSTQILASCALVGAVAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LAGCAGSPANGPQAESPSGRIIYVASPRSPHDVESCLTSRVSQARVAQRNPTTVLIGPYS HHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC ADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHIARCAV CCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHEEEEECCC >Mature Secondary Structure MLGSRHDRIFPQSFRRAAAHRTDAKRMESGCVFCRTTHLGSPMKSTQILASCALVGAVAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH LAGCAGSPANGPQAESPSGRIIYVASPRSPHDVESCLTSRVSQARVAQRNPTTVLIGPYS HHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC ADSDWTVTLAPTASSGTTIGVYRPRSGDGDPEESELRFHIARCAV CCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA