| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237814182
Identifier: 237814182
GI number: 237814182
Start: 3818352
End: 3818597
Strand: Reverse
Name: 237814182
Synonym: GBP346_A3976
Alternate gene names: NA
Gene position: 3818597-3818352 (Counterclockwise)
Preceding gene: 237814185
Following gene: 237814181
Centisome position: 93.17
GC content: 71.54
Gene sequence:
>246_bases ATGGTCGCCGGCATCGAGCCGCTTCGCTGCGCGCGTAGCCCGCTATTTTACCCGATTTGCGCGCTTTTCGAGACGCCCGG CGGTGCGGCGGGCGCGCTTTTCCGCGTCCGTCCGGCCGTCTCGCGCCGGGCGAGCGCTGCGCGCGACGCGCAATTTCCGG CGGCGCGCGGCGGCGAAAGGCAGTACCCCGAAACGAAAGGCTGCCGCGGCGCAGCAACTGGCGCGCCTGCGCGAGGTGTA CACTAG
Upstream 100 bases:
>100_bases TGGGGGCGTTCCTTGATGATGAGCGAGGGGCGGGCGCGGGCCCGGCGGCGCAGCTCGCGTGATTCCCGCCGTGAGAGCCG GGTGGCGGGCCGATAGGGCG
Downstream 100 bases:
>100_bases GCGACCCACTAAGATTTGCTCGGTGCTTTGTACTCCCCGCTTGCCACCCGCCAAGGTTCGATGCCGCGCCGATCCGGCGC GCGACGGACGCCGCAGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MVAGIEPLRCARSPLFYPICALFETPGGAAGALFRVRPAVSRRASAARDAQFPAARGGERQYPETKGCRGAATGAPARGV H
Sequences:
>Translated_81_residues MVAGIEPLRCARSPLFYPICALFETPGGAAGALFRVRPAVSRRASAARDAQFPAARGGERQYPETKGCRGAATGAPARGV H >Mature_81_residues MVAGIEPLRCARSPLFYPICALFETPGGAAGALFRVRPAVSRRASAARDAQFPAARGGERQYPETKGCRGAATGAPARGV H
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8441; Mature: 8441
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAGIEPLRCARSPLFYPICALFETPGGAAGALFRVRPAVSRRASAARDAQFPAARGGER CCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCC QYPETKGCRGAATGAPARGVH CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVAGIEPLRCARSPLFYPICALFETPGGAAGALFRVRPAVSRRASAARDAQFPAARGGER CCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCC QYPETKGCRGAATGAPARGVH CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA