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The map label for this gene is yedY [H]

Identifier: 237814110

GI number: 237814110

Start: 3747365

End: 3748360

Strand: Reverse

Name: yedY [H]

Synonym: GBP346_A3896

Alternate gene names: 237814110

Gene position: 3748360-3747365 (Counterclockwise)

Preceding gene: 237814111

Following gene: 237814109

Centisome position: 91.46

GC content: 65.26

Gene sequence:

>996_bases
ATGTTGATCAAGAAAACGCTGCGCGCGGCGCTTGCCGGCGACGACATCCCGCGCAGCGAAATCACGCCGCGAGCGGTGTT
CGAGCATCGCCGCCGCATCCTGCAGGCGGCGGGCGCCGCCGCGGCGGGCGGACTCGTCGGCGCGCACGGGCTCGCGCTCG
CCGCGTACGCATCGCCGGATGCGGCGGCGCGCAAGCTTGCGGCGCCGGCCAATCCGAAGTTCGTCATCCCGGAGAAGGTG
ACGTCGTTCAAGGACATCACGACCTATAACAACTTCTACGAATTCGGCACCGACAAGAGCGATCCCGCGCGCCGTGCCGG
CACGCTGCGGCCGCATCCGTGGCGCGTGTCGGTCGAAGGAGAAGTCAGGAACCCGAAGGTGTACGACATCGACGCGCTGC
TGAAGCTCGCGCCGCTCGAGGAGCGCGTGTACCGGCTGCGCTGCGTCGAAGGCTGGTCGATGGTGATTCCGTGGATCGGC
TTTCCGCTGGCGGAGCTCATCAAGCGCGTCGAGCCGACCGCCAACGCGAAGTACGTGCAGTTCGTCACGCTCGCGGACCC
GTCGCAGATGCCGGGGCTGTCCGCGCCGATCCTCGATTGGCCGTATTCGGAAGGCCTGCGGATGGACGAGGCGATGAATC
CGCTGACGCTGCTCACGATGGGCGTCTACGGGCAGGTGCTGCCCAATCAGAACGGTGCGCCCGTGCGGGTGATCGTGCCG
TGGAAGTACGGCTTCAAGAGCGCGAAATCGATCGTGAAGATCCGCTTCGTCGACCGGCAGCCGCCGACGAGCTGGAACAC
GTATGCGCCGAACGAATACGGCTTCTATTCGAACGTCAACCCGAACGTCGACCATCCGCGCTGGAGCCAGGCGACCGAGC
GGCGCATCGGCGAGGACGGCTTCTTCACGCCGAAGCGCAAGACGCTGATGTTCAACGGCTATGGCGATTGGGTCGCGTCG
ATGTATCGCGGGATGGATCTGAAGAAATACTTCTGA

Upstream 100 bases:

>100_bases
CGCTACGCTGCCGAAACGGCCGGCGCGCAACCGGGTCCAACGGTTGTCGGGACGCGAGCGTCCTGGACGGCCGTCCCGAC
CGGCAGAACGGAGCATCGAC

Downstream 100 bases:

>100_bases
GTACGACAGATGGAGAACGATATGCAATCCTCGACATTTGCCGGCTCGGCAAGCCCGGGCGCCGGCGCGCACGGCCGCGC
ACCGCGCCGGGATGCCGGCC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLIKKTLRAALAGDDIPRSEITPRAVFEHRRRILQAAGAAAAGGLVGAHGLALAAYASPDAAARKLAAPANPKFVIPEKV
TSFKDITTYNNFYEFGTDKSDPARRAGTLRPHPWRVSVEGEVRNPKVYDIDALLKLAPLEERVYRLRCVEGWSMVIPWIG
FPLAELIKRVEPTANAKYVQFVTLADPSQMPGLSAPILDWPYSEGLRMDEAMNPLTLLTMGVYGQVLPNQNGAPVRVIVP
WKYGFKSAKSIVKIRFVDRQPPTSWNTYAPNEYGFYSNVNPNVDHPRWSQATERRIGEDGFFTPKRKTLMFNGYGDWVAS
MYRGMDLKKYF

Sequences:

>Translated_331_residues
MLIKKTLRAALAGDDIPRSEITPRAVFEHRRRILQAAGAAAAGGLVGAHGLALAAYASPDAAARKLAAPANPKFVIPEKV
TSFKDITTYNNFYEFGTDKSDPARRAGTLRPHPWRVSVEGEVRNPKVYDIDALLKLAPLEERVYRLRCVEGWSMVIPWIG
FPLAELIKRVEPTANAKYVQFVTLADPSQMPGLSAPILDWPYSEGLRMDEAMNPLTLLTMGVYGQVLPNQNGAPVRVIVP
WKYGFKSAKSIVKIRFVDRQPPTSWNTYAPNEYGFYSNVNPNVDHPRWSQATERRIGEDGFFTPKRKTLMFNGYGDWVAS
MYRGMDLKKYF
>Mature_331_residues
MLIKKTLRAALAGDDIPRSEITPRAVFEHRRRILQAAGAAAAGGLVGAHGLALAAYASPDAAARKLAAPANPKFVIPEKV
TSFKDITTYNNFYEFGTDKSDPARRAGTLRPHPWRVSVEGEVRNPKVYDIDALLKLAPLEERVYRLRCVEGWSMVIPWIG
FPLAELIKRVEPTANAKYVQFVTLADPSQMPGLSAPILDWPYSEGLRMDEAMNPLTLLTMGVYGQVLPNQNGAPVRVIVP
WKYGFKSAKSIVKIRFVDRQPPTSWNTYAPNEYGFYSNVNPNVDHPRWSQATERRIGEDGFFTPKRKTLMFNGYGDWVAS
MYRGMDLKKYF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=330, Percent_Identity=52.1212121212121, Blast_Score=333, Evalue=1e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 37123; Mature: 37123

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKKTLRAALAGDDIPRSEITPRAVFEHRRRILQAAGAAAAGGLVGAHGLALAAYASPD
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHCHHEEEEECCCC
AAARKLAAPANPKFVIPEKVTSFKDITTYNNFYEFGTDKSDPARRAGTLRPHPWRVSVEG
HHHHHHCCCCCCCEECCHHHHCHHHHHHCCCHHCCCCCCCCHHHHCCCCCCCCEEEEECC
EVRNPKVYDIDALLKLAPLEERVYRLRCVEGWSMVIPWIGFPLAELIKRVEPTANAKYVQ
CCCCCEEEEHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHCCCCCCCEEEE
FVTLADPSQMPGLSAPILDWPYSEGLRMDEAMNPLTLLTMGVYGQVLPNQNGAPVRVIVP
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHEEHHHHHHHCCCCCCCCCEEEEEC
WKYGFKSAKSIVKIRFVDRQPPTSWNTYAPNEYGFYSNVNPNVDHPRWSQATERRIGEDG
CCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
FFTPKRKTLMFNGYGDWVASMYRGMDLKKYF
CCCCCCCEEEECCCHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MLIKKTLRAALAGDDIPRSEITPRAVFEHRRRILQAAGAAAAGGLVGAHGLALAAYASPD
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHCHHEEEEECCCC
AAARKLAAPANPKFVIPEKVTSFKDITTYNNFYEFGTDKSDPARRAGTLRPHPWRVSVEG
HHHHHHCCCCCCCEECCHHHHCHHHHHHCCCHHCCCCCCCCHHHHCCCCCCCCEEEEECC
EVRNPKVYDIDALLKLAPLEERVYRLRCVEGWSMVIPWIGFPLAELIKRVEPTANAKYVQ
CCCCCEEEEHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHCCCCCCCEEEE
FVTLADPSQMPGLSAPILDWPYSEGLRMDEAMNPLTLLTMGVYGQVLPNQNGAPVRVIVP
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHEEHHHHHHHCCCCCCCCCEEEEEC
WKYGFKSAKSIVKIRFVDRQPPTSWNTYAPNEYGFYSNVNPNVDHPRWSQATERRIGEDG
CCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
FFTPKRKTLMFNGYGDWVASMYRGMDLKKYF
CCCCCCCEEEECCCHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA