| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814103
Identifier: 237814103
GI number: 237814103
Start: 3740751
End: 3741698
Strand: Reverse
Name: 237814103
Synonym: GBP346_A3889
Alternate gene names: NA
Gene position: 3741698-3740751 (Counterclockwise)
Preceding gene: 237814105
Following gene: 237814102
Centisome position: 91.29
GC content: 75.74
Gene sequence:
>948_bases ATGCAACGACGTTCGTGGTGGTCGGTCGGCCGGCGTTTCGCGGCGGGGATCGACGTGAACCGGCGCACGGTGCGGATTGC GGTGCTGAGCCGACGGGCCCGGGGCGGCGCGGTCCGGCTCGAGGCGCTCGACGCGGAGCCCTTGCCGGCCGGCGCGTTCG ACGAGCCGGCCGACGCCGACTGGGCGGCCGTGGCGGCCGCGATGGCGGCGGCGCTCGGACGCGTGCCGCCGATGCGGCCG GCGGGGTGGGTGCGGCGGACGATGGCGGGCGTGATGGCGTTGCCGGCCGGCGCGTTCTCGAGCGCGACGCTTGCGTGGCC GCGGGCGGACGCGGCGGCAGCCGTCGAGCCGGCGGTGCGCGCGGCGGCCGAGCGGCTCACCGGACTCGCGCGCGACGCGC TCGCGGTCGACTGGTGCGTGAACGACGCGGGCGCGGCGTCGGAGCTGGTATTCGCGACCGCGGCGCACGTGCATCTCGAC GTGCGGATCGAGGCGGCTGCGTCGGCGGGTGTCGAGCTTGTCGCGATCGACGGCGAGCCGCCCGCCGCCTTGCGGGCGAT ACGCCATGTCGCCGCGCGCGAAGTCGACTCGGGCGAGCCGTATCTCGGCGTCTGGATCGGCGAGAGCGGCGTGCACGGCT GGCTCGTGTCGGCCGATGCGGTTGCCGCGCAGATCCGCTATCCGGCGCCCGAGCATGCGGATCTGGCCGATGCGCTGCGC GAGCTCGCGCGTGCCGGCGCGCCGCGCTGCGCGTTTGTCGCGGGCGACCCGGAATGGCTCGGTGGCGCCCGGATTTCGCT CGCCGATGTCGGCGATCTGCTCGGCTGCATCGTCTTGCCGTTCGAATGCGCGGCGTGCGGCCCGCTCGGCGCGGTCGACG ACGGGCTCGCCCATTCGCCCGGTTTCGCGGTCGCGTTCGGGCTCGCGCTGCGCGGGGTGTTCGAATGA
Upstream 100 bases:
>100_bases GCACGCGTTGGCCGTTCGGCAGACTCCCGGCGCGCCGGCCGGCTTCGCAAAATGGCTCCATATCGTGCCTCGACGGGAGG CGCGCTCATGGAGGACTGAG
Downstream 100 bases:
>100_bases TGCGCGTGGTGGCGGGCGGTGCGATGCCGCGCGACGCGCGAATGCGGCGCGCGTGGCTGGGCGGGTTCAATCTGTTGCCG TACCGTGCGCGCGACGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MQRRSWWSVGRRFAAGIDVNRRTVRIAVLSRRARGGAVRLEALDAEPLPAGAFDEPADADWAAVAAAMAAALGRVPPMRP AGWVRRTMAGVMALPAGAFSSATLAWPRADAAAAVEPAVRAAAERLTGLARDALAVDWCVNDAGAASELVFATAAHVHLD VRIEAAASAGVELVAIDGEPPAALRAIRHVAAREVDSGEPYLGVWIGESGVHGWLVSADAVAAQIRYPAPEHADLADALR ELARAGAPRCAFVAGDPEWLGGARISLADVGDLLGCIVLPFECAACGPLGAVDDGLAHSPGFAVAFGLALRGVFE
Sequences:
>Translated_315_residues MQRRSWWSVGRRFAAGIDVNRRTVRIAVLSRRARGGAVRLEALDAEPLPAGAFDEPADADWAAVAAAMAAALGRVPPMRP AGWVRRTMAGVMALPAGAFSSATLAWPRADAAAAVEPAVRAAAERLTGLARDALAVDWCVNDAGAASELVFATAAHVHLD VRIEAAASAGVELVAIDGEPPAALRAIRHVAAREVDSGEPYLGVWIGESGVHGWLVSADAVAAQIRYPAPEHADLADALR ELARAGAPRCAFVAGDPEWLGGARISLADVGDLLGCIVLPFECAACGPLGAVDDGLAHSPGFAVAFGLALRGVFE >Mature_315_residues MQRRSWWSVGRRFAAGIDVNRRTVRIAVLSRRARGGAVRLEALDAEPLPAGAFDEPADADWAAVAAAMAAALGRVPPMRP AGWVRRTMAGVMALPAGAFSSATLAWPRADAAAAVEPAVRAAAERLTGLARDALAVDWCVNDAGAASELVFATAAHVHLD VRIEAAASAGVELVAIDGEPPAALRAIRHVAAREVDSGEPYLGVWIGESGVHGWLVSADAVAAQIRYPAPEHADLADALR ELARAGAPRCAFVAGDPEWLGGARISLADVGDLLGCIVLPFECAACGPLGAVDDGLAHSPGFAVAFGLALRGVFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32520; Mature: 32520
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRSWWSVGRRFAAGIDVNRRTVRIAVLSRRARGGAVRLEALDAEPLPAGAFDEPADAD CCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCH WAAVAAAMAAALGRVPPMRPAGWVRRTMAGVMALPAGAFSSATLAWPRADAAAAVEPAVR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHH AAAERLTGLARDALAVDWCVNDAGAASELVFATAAHVHLDVRIEAAASAGVELVAIDGEP HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHEEEEEEEEEEEEEECCCCCEEEEEECCCC PAALRAIRHVAAREVDSGEPYLGVWIGESGVHGWLVSADAVAAQIRYPAPEHADLADALR HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEHHHHEEEEECCCCCCCCHHHHHH ELARAGAPRCAFVAGDPEWLGGARISLADVGDLLGCIVLPFECAACGPLGAVDDGLAHSP HHHHCCCCCEEEEECCHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GFAVAFGLALRGVFE CHHHHHHHHHHHCCC >Mature Secondary Structure MQRRSWWSVGRRFAAGIDVNRRTVRIAVLSRRARGGAVRLEALDAEPLPAGAFDEPADAD CCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCH WAAVAAAMAAALGRVPPMRPAGWVRRTMAGVMALPAGAFSSATLAWPRADAAAAVEPAVR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHH AAAERLTGLARDALAVDWCVNDAGAASELVFATAAHVHLDVRIEAAASAGVELVAIDGEP HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHEEEEEEEEEEEEEECCCCCEEEEEECCCC PAALRAIRHVAAREVDSGEPYLGVWIGESGVHGWLVSADAVAAQIRYPAPEHADLADALR HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEHHHHEEEEECCCCCCCCHHHHHH ELARAGAPRCAFVAGDPEWLGGARISLADVGDLLGCIVLPFECAACGPLGAVDDGLAHSP HHHHCCCCCEEEEECCHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GFAVAFGLALRGVFE CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA