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The map label for this gene is ugpB [H]

Identifier: 237814096

GI number: 237814096

Start: 3732992

End: 3734317

Strand: Reverse

Name: ugpB [H]

Synonym: GBP346_A3882

Alternate gene names: 237814096

Gene position: 3734317-3732992 (Counterclockwise)

Preceding gene: 237814097

Following gene: 237814095

Centisome position: 91.11

GC content: 65.99

Gene sequence:

>1326_bases
ATGAAATACAAGATGCTGGTTCGTTCGCTCGCGTTCGGGGGCGTGCTTTGGTTCGGCGCGCAGCAGGCGGCGTGCGCCGC
CACCGAGATCCAGTTCTGGCATGCGATGGAGGCGGCGCTCGGCGAGCGCGTGAACGAGATCGCCGCGCAGTTCAATGCGT
CGCAAAGCGACTACAAGATCGTGCCGGTCTTCAAGGGCACCTACGATCAGGCGCTCGCGGCGGGTATCGCCGCGTACCGC
AGCGGCAACGCGCCGGCGATCCTGCAGGTGTACGAAGTGGGCACGGCGACGATGATGCAGGCGAAGAAGGCGGTGCTGCC
CGTATCCGACGTGTTCCGCCAGGCGGGCGTGCCGCTCGACGAGAAGGCGTTCGTGCCGACGATCGCGAGCTACTACAGCG
ATGCGAGGACGGGCCGCCTCGTATCGATGCCGTTCAACAGCTCGACGCCCGTGCTGTACTACAACAAGGACGCGTTCAGG
AAGGCGGGGCTCGATCCGAACCAGCCGCCGAAGACGTGGGCCGACGTGAAGGCCGACGCGGAAAAGCTGAAGAAGGCGGG
CTACGCGTGCGGCTACACGACGGGCTGGCAGGGCTGGATCCAGCTCGAGAACTACAGCGCGTGGCATGGCCTGCCGTTCG
CGACGCGCAACAACGGCTTCGACGGCGCCGATGCGACGCTCGAGTTCAACAAGCCGCAGCAGATCGCGCACATCCAGTTC
CTGCAGGACATGGCGAAGGACGGCACGTTTACGTACGTCGGCCGCAAGGACGAGGCGAGCGCGAAGTTCTACAGCGGCGA
TTGCGCGATCATGACGACGTCGTCGGGCGCGCTCGCGACGATCCACAAGTACGCGAAGTTCGATTTCGGCACCGGAATGA
TGCCGTACGATGCGGGCGTGAAGGGTGCGCCGCAGAACGCGATCATCGGCGGCGCGAGCCTGTGGGTGCTCGCGGGCAAG
GATCCGGCCACGTACAAGGGCGTCGCGAAGTTCCTCGCCTATCTGAGCTCGCCCGCCGTCGCCGCGAAGTGGCACGAGGA
CACGGGCTATCTGCCGGTGACGACGGCCGCATACGATCTCGCGCGCGAGCAGGGCTTCTATGCGAAGCACCCGGGCGCGG
ACACGGCGATCAAGCAGATGATGAACAAACCGCCGCTGCCGTACACGAAGGGGCTGCGGCTCGGCAACATGCCGCAGATC
CGCACGATCGTCGACGAGGAGCTCGAGCAGGTGTGGGCGCAGAAGAAGACGCCGAAGGCGGCGCTCGATTCCGCCGCCGC
GCGCGGCGACGAACTGCTGCGCCGCTTCGAGAAATCGGGCGGCTGA

Upstream 100 bases:

>100_bases
CATGGACGAAAACTAAACTGTCCGGCTCGCCGCATCCGGCACGGATGCCGTGACGGTGCGGCGCGCGTTGCCCGGACCGA
GGAGAAAAGGAGAGAGGTCG

Downstream 100 bases:

>100_bases
GCCCGCGCCGCCGGCGCGCGGCTCGGCCGGCGCGGCCTTTTCGCGCATGCGGTTGCGCGAGCAAACGGGCTGCGCGGCCC
GCCGCGCCCGGCGGCATTCG

Product: glycerol-3-phosphate transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKYKMLVRSLAFGGVLWFGAQQAACAATEIQFWHAMEAALGERVNEIAAQFNASQSDYKIVPVFKGTYDQALAAGIAAYR
SGNAPAILQVYEVGTATMMQAKKAVLPVSDVFRQAGVPLDEKAFVPTIASYYSDARTGRLVSMPFNSSTPVLYYNKDAFR
KAGLDPNQPPKTWADVKADAEKLKKAGYACGYTTGWQGWIQLENYSAWHGLPFATRNNGFDGADATLEFNKPQQIAHIQF
LQDMAKDGTFTYVGRKDEASAKFYSGDCAIMTTSSGALATIHKYAKFDFGTGMMPYDAGVKGAPQNAIIGGASLWVLAGK
DPATYKGVAKFLAYLSSPAVAAKWHEDTGYLPVTTAAYDLAREQGFYAKHPGADTAIKQMMNKPPLPYTKGLRLGNMPQI
RTIVDEELEQVWAQKKTPKAALDSAAARGDELLRRFEKSGG

Sequences:

>Translated_441_residues
MKYKMLVRSLAFGGVLWFGAQQAACAATEIQFWHAMEAALGERVNEIAAQFNASQSDYKIVPVFKGTYDQALAAGIAAYR
SGNAPAILQVYEVGTATMMQAKKAVLPVSDVFRQAGVPLDEKAFVPTIASYYSDARTGRLVSMPFNSSTPVLYYNKDAFR
KAGLDPNQPPKTWADVKADAEKLKKAGYACGYTTGWQGWIQLENYSAWHGLPFATRNNGFDGADATLEFNKPQQIAHIQF
LQDMAKDGTFTYVGRKDEASAKFYSGDCAIMTTSSGALATIHKYAKFDFGTGMMPYDAGVKGAPQNAIIGGASLWVLAGK
DPATYKGVAKFLAYLSSPAVAAKWHEDTGYLPVTTAAYDLAREQGFYAKHPGADTAIKQMMNKPPLPYTKGLRLGNMPQI
RTIVDEELEQVWAQKKTPKAALDSAAARGDELLRRFEKSGG
>Mature_441_residues
MKYKMLVRSLAFGGVLWFGAQQAACAATEIQFWHAMEAALGERVNEIAAQFNASQSDYKIVPVFKGTYDQALAAGIAAYR
SGNAPAILQVYEVGTATMMQAKKAVLPVSDVFRQAGVPLDEKAFVPTIASYYSDARTGRLVSMPFNSSTPVLYYNKDAFR
KAGLDPNQPPKTWADVKADAEKLKKAGYACGYTTGWQGWIQLENYSAWHGLPFATRNNGFDGADATLEFNKPQQIAHIQF
LQDMAKDGTFTYVGRKDEASAKFYSGDCAIMTTSSGALATIHKYAKFDFGTGMMPYDAGVKGAPQNAIIGGASLWVLAGK
DPATYKGVAKFLAYLSSPAVAAKWHEDTGYLPVTTAAYDLAREQGFYAKHPGADTAIKQMMNKPPLPYTKGLRLGNMPQI
RTIVDEELEQVWAQKKTPKAALDSAAARGDELLRRFEKSGG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=416, Percent_Identity=69.4711538461538, Blast_Score=629, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47988; Mature: 47988

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKMLVRSLAFGGVLWFGAQQAACAATEIQFWHAMEAALGERVNEIAAQFNASQSDYKI
CCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VPVFKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVLPVSDVFRQAGVPLD
EEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHCCCCCC
EKAFVPTIASYYSDARTGRLVSMPFNSSTPVLYYNKDAFRKAGLDPNQPPKTWADVKADA
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHH
EKLKKAGYACGYTTGWQGWIQLENYSAWHGLPFATRNNGFDGADATLEFNKPQQIAHIQF
HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
LQDMAKDGTFTYVGRKDEASAKFYSGDCAIMTTSSGALATIHKYAKFDFGTGMMPYDAGV
HHHHHCCCCEEEECCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
KGAPQNAIIGGASLWVLAGKDPATYKGVAKFLAYLSSPAVAAKWHEDTGYLPVTTAAYDL
CCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHHH
AREQGFYAKHPGADTAIKQMMNKPPLPYTKGLRLGNMPQIRTIVDEELEQVWAQKKTPKA
HHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
ALDSAAARGDELLRRFEKSGG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKMLVRSLAFGGVLWFGAQQAACAATEIQFWHAMEAALGERVNEIAAQFNASQSDYKI
CCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VPVFKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVLPVSDVFRQAGVPLD
EEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHCCCCCC
EKAFVPTIASYYSDARTGRLVSMPFNSSTPVLYYNKDAFRKAGLDPNQPPKTWADVKADA
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHH
EKLKKAGYACGYTTGWQGWIQLENYSAWHGLPFATRNNGFDGADATLEFNKPQQIAHIQF
HHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
LQDMAKDGTFTYVGRKDEASAKFYSGDCAIMTTSSGALATIHKYAKFDFGTGMMPYDAGV
HHHHHCCCCEEEECCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
KGAPQNAIIGGASLWVLAGKDPATYKGVAKFLAYLSSPAVAAKWHEDTGYLPVTTAAYDL
CCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHHH
AREQGFYAKHPGADTAIKQMMNKPPLPYTKGLRLGNMPQIRTIVDEELEQVWAQKKTPKA
HHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
ALDSAAARGDELLRRFEKSGG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA