| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is mlaE [H]
Identifier: 237814076
GI number: 237814076
Start: 3710898
End: 3711665
Strand: Reverse
Name: mlaE [H]
Synonym: GBP346_A3861
Alternate gene names: 237814076
Gene position: 3711665-3710898 (Counterclockwise)
Preceding gene: 237814077
Following gene: 237814075
Centisome position: 90.56
GC content: 65.23
Gene sequence:
>768_bases ATGATCAGCGCGATCGGGCGTTTCGTGATCGGCGGACTCGAACGCACGGGCTATGCGACCCGGATGTTCGTGCGCGTCGT GCTCGAATTCTTTTCGCTGTTGCGGCGGCCGCGGCTCGTCACGAAGCAGATCCATTTTCTCGGCAATTATTCGTTCGTGA TCATCGCCGTGTCGGGCCTGTTCGTCGGCTTCGTGCTCGGCCTGCAGGGCTACTACACGCTGAACCGCTACGGCTCCGAG CAGGCGTTGGGCCTGCTCGTCGCGCTGTCGCTCGTGCGCGAGCTCGGCCCCGTCGTGTCGGCGCTGCTGTTCGCCGGCCG CGCGGGCACGTCGCTCACGGCCGAGATCGGCCTGATGAAGGCGGGCGAGCAACTGACCGCGCTCGAGATGATGGCCGTCG ATCCGCTGAAGAACGTGATCGCGCCGCGGATGTGGGCGGGCGTCATCGCGATGCCGCTGCTCGCGGCGATCTTCAGCGCG GTCGGCGTGCTCGGCGGCTATGTCGTCGGCGTGCTGCTGATCGGCGTCGATCCCGGCGCGTTCTGGTCGCAGATGCAAGG CGGCGTCGAAGTGTGGGCCGACGTCGGCAACGGCGTGATCAAGAGCGTCGTGTTCGGCTTCGCCGTCACGTTTATCGCGC TGTTTCAGGGTTACGAAGCGAAGCCGACACCCGAGGGCGTGTCGCACGCGACGACCAAGACTGTCGTGTATGCGTCGCTC GCCGTACTCGGCCTCGATTTTCTGCTGACCGCGTTGATGTTCAGCTAA
Upstream 100 bases:
>100_bases GCGTGCGCCAGTTCATCGACGGCGCGCCGGACGGCCCGTTCAAATTTCACTACATGAGCCAGCCGCTCGCGGCGGACTTC GGACTGGGCGGAGGGCGCAG
Downstream 100 bases:
>100_bases GCCTTTTCTGGGATGACGATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTCTTCGTAGTGTTGGGCTTTCTCGCGTT GCTGTTCCTCGCGCTGAAGG
Product: ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSA VGVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTKTVVYASL AVLGLDFLLTALMFS
Sequences:
>Translated_255_residues MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSA VGVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTKTVVYASL AVLGLDFLLTALMFS >Mature_255_residues MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSA VGVLGGYVVGVLLIGVDPGAFWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTKTVVYASL AVLGLDFLLTALMFS
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=241, Percent_Identity=59.3360995850622, Blast_Score=271, Evalue=3e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27133; Mature: 27133
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRPRLVTKQIHFLGNYSFVIIAVSGL CCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLLIGVDPGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH FWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTKTVVYASL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC >Mature Secondary Structure MISAIGRFVIGGLERTGYATRMFVRVVLEFFSLLRRPRLVTKQIHFLGNYSFVIIAVSGL CCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVSALLFAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTALEMMAVDPLKNVIAPRMWAGVIAMPLLAAIFSAVGVLGGYVVGVLLIGVDPGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH FWSQMQGGVEVWADVGNGVIKSVVFGFAVTFIALFQGYEAKPTPEGVSHATTKTVVYASL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]