| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is hisC_2 [H]
Identifier: 237814065
GI number: 237814065
Start: 3701394
End: 3702464
Strand: Reverse
Name: hisC_2 [H]
Synonym: GBP346_A3850
Alternate gene names: 237814065
Gene position: 3702464-3701394 (Counterclockwise)
Preceding gene: 237814066
Following gene: 237814064
Centisome position: 90.34
GC content: 69.37
Gene sequence:
>1071_bases ATGACTACGCCAGAAGACATCATCCGCCGCGACGTGCTCGCGATGACGGGCTACCCGGTGCCGGACGCAACGGGCTTCGT GAAGCTCGACGCGATGGAGAACCCGTATTCGCTGCCCGCGCCGCTCGCGGCCGAGCTCGGCGAGCGGCTCGCGCACGTCG CGCTGAACCGCTATCCCGCGCCGCGCCCCGCCGCGCTGATCGACCGGCTGCGCGCCGTGACGGGCGTGCCCGCCGCGTGC GACGTGCTGCTCGGCAACGGCTCGGACGAGATCATCAGCATGCTCGCGATGGCGTGCGCGAAGCCGGGCGCGAAGGTGCT CGCGCCGGTGCCGGGCTTCGTGATGTACGAGCTGTCGGCGAAGTTCGCGCAGCTCGAGTTCGTCGGCGTGCCGCTTCGCG CGGACCTCACGCTCGACATCGACGCGATGCTCGCGGCGCTCGCCGAGCACCGGCCGGCGCTCGTCTATCTCGCGTATCCG AACAACCCGACGGGCACGCTGTACCCGGACGAGGACGTCGAGCGGATCATCGCGGCCGCCGCCACGAGCCTCGTCGTGAT CGACGAGGCGTACCAGCCGTTCGCGCAGCGCAGTTGGCTGCCGCGCGCGGCCCAGTTCGACAACGTCGTCGTGATGCGCA CGATGTCGAAGCTCGGCCTGGCGGGCATTCGCCTCGGCTATCTGGTCGGGCTGCCGGCATGGCTCGTGCAGTTCGACAAG GTGCGCCCGCCGTACAACGTGAACGTGCTGACGCAGGCGGCGGCGGAATTCCTGCTCGAGCGCGTCGACGTGCTCGACGC GCAGGCCGCGCAACTGCGCGACGCGCGCACGGCGCTCGCGCACGCGATCGGCGCGCTGCCGGGCGCCACCGTGTTCCCGA GCGCGGGCAATTTCCTGCTCGTACGGGTGCCGGACGCGGCCGCCGTGTTCGATGTGCTTTTGACCGAGCGGGTATTGATC AAAAACGTGAGTAAAATGCATCCATTGCTCGCCAATTGCGTGCGCGTGACGGTTGGGTCTCCCGAAGAAAACGCGCGCCT GCTGGCCGCACTGAAGCTGGCGCTGCCCTGA
Upstream 100 bases:
>100_bases ACCCGAGACCGCCCGGCGAGGCGTCTCGCGCGGCGCGACCGGTGCGCCGCGCGGGACGCCTTGGCCGGGGCCACGCCGGC GCCCGCGCGCCGTTGCCACC
Downstream 100 bases:
>100_bases CGGGCCACCCCGGGGCGCCGCCTTTCTCGTCCCCATTTGCCTTAGTCATTTCAAGGAAACACCATGCGCGTGGCGCAAGT CGTTCGCAACACCAGCGAAA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTTPEDIIRRDVLAMTGYPVPDATGFVKLDAMENPYSLPAPLAAELGERLAHVALNRYPAPRPAALIDRLRAVTGVPAAC DVLLGNGSDEIISMLAMACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLRADLTLDIDAMLAALAEHRPALVYLAYP NNPTGTLYPDEDVERIIAAAATSLVVIDEAYQPFAQRSWLPRAAQFDNVVVMRTMSKLGLAGIRLGYLVGLPAWLVQFDK VRPPYNVNVLTQAAAEFLLERVDVLDAQAAQLRDARTALAHAIGALPGATVFPSAGNFLLVRVPDAAAVFDVLLTERVLI KNVSKMHPLLANCVRVTVGSPEENARLLAALKLALP
Sequences:
>Translated_356_residues MTTPEDIIRRDVLAMTGYPVPDATGFVKLDAMENPYSLPAPLAAELGERLAHVALNRYPAPRPAALIDRLRAVTGVPAAC DVLLGNGSDEIISMLAMACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLRADLTLDIDAMLAALAEHRPALVYLAYP NNPTGTLYPDEDVERIIAAAATSLVVIDEAYQPFAQRSWLPRAAQFDNVVVMRTMSKLGLAGIRLGYLVGLPAWLVQFDK VRPPYNVNVLTQAAAEFLLERVDVLDAQAAQLRDARTALAHAIGALPGATVFPSAGNFLLVRVPDAAAVFDVLLTERVLI KNVSKMHPLLANCVRVTVGSPEENARLLAALKLALP >Mature_355_residues TTPEDIIRRDVLAMTGYPVPDATGFVKLDAMENPYSLPAPLAAELGERLAHVALNRYPAPRPAALIDRLRAVTGVPAACD VLLGNGSDEIISMLAMACAKPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLRADLTLDIDAMLAALAEHRPALVYLAYPN NPTGTLYPDEDVERIIAAAATSLVVIDEAYQPFAQRSWLPRAAQFDNVVVMRTMSKLGLAGIRLGYLVGLPAWLVQFDKV RPPYNVNVLTQAAAEFLLERVDVLDAQAAQLRDARTALAHAIGALPGATVFPSAGNFLLVRVPDAAAVFDVLLTERVLIK NVSKMHPLLANCVRVTVGSPEENARLLAALKLALP
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=363, Percent_Identity=31.129476584022, Blast_Score=130, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322075, Length=365, Percent_Identity=29.041095890411, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 38172; Mature: 38041
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPEDIIRRDVLAMTGYPVPDATGFVKLDAMENPYSLPAPLAAELGERLAHVALNRYPA CCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PRPAALIDRLRAVTGVPAACDVLLGNGSDEIISMLAMACAKPGAKVLAPVPGFVMYELSA CCHHHHHHHHHHHHCCCHHHHEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEHHHH KFAQLEFVGVPLRADLTLDIDAMLAALAEHRPALVYLAYPNNPTGTLYPDEDVERIIAAA HHEEEEEEECCEECCCEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH ATSLVVIDEAYQPFAQRSWLPRAAQFDNVVVMRTMSKLGLAGIRLGYLVGLPAWLVQFDK HHHEEEECHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC VRPPYNVNVLTQAAAEFLLERVDVLDAQAAQLRDARTALAHAIGALPGATVFPSAGNFLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE VRVPDAAAVFDVLLTERVLIKNVSKMHPLLANCVRVTVGSPEENARLLAALKLALP EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TTPEDIIRRDVLAMTGYPVPDATGFVKLDAMENPYSLPAPLAAELGERLAHVALNRYPA CCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PRPAALIDRLRAVTGVPAACDVLLGNGSDEIISMLAMACAKPGAKVLAPVPGFVMYELSA CCHHHHHHHHHHHHCCCHHHHEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEHHHH KFAQLEFVGVPLRADLTLDIDAMLAALAEHRPALVYLAYPNNPTGTLYPDEDVERIIAAA HHEEEEEEECCEECCCEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH ATSLVVIDEAYQPFAQRSWLPRAAQFDNVVVMRTMSKLGLAGIRLGYLVGLPAWLVQFDK HHHEEEECHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC VRPPYNVNVLTQAAAEFLLERVDVLDAQAAQLRDARTALAHAIGALPGATVFPSAGNFLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE VRVPDAAAVFDVLLTERVLIKNVSKMHPLLANCVRVTVGSPEENARLLAALKLALP EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA