| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is hisH [H]
Identifier: 237814062
GI number: 237814062
Start: 3699429
End: 3700070
Strand: Reverse
Name: hisH [H]
Synonym: GBP346_A3847
Alternate gene names: 237814062
Gene position: 3700070-3699429 (Counterclockwise)
Preceding gene: 237814063
Following gene: 237814061
Centisome position: 90.28
GC content: 66.67
Gene sequence:
>642_bases ATGAAAACTTCGATTGCAATTGTGGATTACGGAATGGGCAACCTGCGCTCGGTCGCGCAGGCGCTCATGAAGGCGGAGCC GGCGGCCGACGTGAAGATCGTCGACCGGCCCGAGGCGATTCGCGCGGCCGACCGCGTGGTGCTGCCGGGCCAGGGCGCGA TGCCCGACTGCATGCGGTACCTCGGCGAATCCGGCTTGCAGGAGGCGGTGGTCGAGGCGTCGCGCACGAAGCCGCTGCTC GGCGTGTGCGTCGGCGAGCAGATGCTGTTCGACTGGAGCGCGGAAGGCGACACGAAGGGGCTCGGCCTGCTGCCGGGCAA GGTGGTGCGCTTCGCGCTCGAGGGCCGGCTGCAGGACGACGGCTCGCGCTTCAAGGTGCCGCAGATGGGCTGGAACCGGG TGCGCCAGACCCAGGCGCATCCGTTGTGGGACGGCGTGCCGGATGACGCCTATTTCTACTTCGTGCACAGTTATTACGTG GTGCCGGACAACCCGGCGCACACGGCGGGCGAGACCCTGTACGGCGACGTTTTCACGTCCGCGGTCGCGCGCGACAATCT CTTCGCGACCCAATTTCACCCCGAAAAGAGCGCCGAAGTGGGGCTGCGGCTGTACCGGAATTTTGTCCACTGGAACCCCT GA
Upstream 100 bases:
>100_bases CCGGCATCAACATCGTCACGCGTCTGATGGGATTGATGCTGTCGGCGCTGGCGGTGGAATTCATCGTCGACGGACTGAAG GCATTATTGCCTGCACTGAC
Downstream 100 bases:
>100_bases ACGTGGCGCGGGAACCACACTCGGCGTGCGCAAAACGCCCGCCGCACGGGCTTCGCGAGCGGATACGCAGAAAGAGTTGT ACTAAACTAGCGAGACGGCA
Product: imidazole glycerol phosphate synthase subunit HisH
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKTSIAIVDYGMGNLRSVAQALMKAEPAADVKIVDRPEAIRAADRVVLPGQGAMPDCMRYLGESGLQEAVVEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFALEGRLQDDGSRFKVPQMGWNRVRQTQAHPLWDGVPDDAYFYFVHSYYV VPDNPAHTAGETLYGDVFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWNP
Sequences:
>Translated_213_residues MKTSIAIVDYGMGNLRSVAQALMKAEPAADVKIVDRPEAIRAADRVVLPGQGAMPDCMRYLGESGLQEAVVEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFALEGRLQDDGSRFKVPQMGWNRVRQTQAHPLWDGVPDDAYFYFVHSYYV VPDNPAHTAGETLYGDVFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWNP >Mature_213_residues MKTSIAIVDYGMGNLRSVAQALMKAEPAADVKIVDRPEAIRAADRVVLPGQGAMPDCMRYLGESGLQEAVVEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFALEGRLQDDGSRFKVPQMGWNRVRQTQAHPLWDGVPDDAYFYFVHSYYV VPDNPAHTAGETLYGDVFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWNP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=208, Percent_Identity=36.0576923076923, Blast_Score=121, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6319725, Length=218, Percent_Identity=31.651376146789, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 23573; Mature: 23573
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSIAIVDYGMGNLRSVAQALMKAEPAADVKIVDRPEAIRAADRVVLPGQGAMPDCMRY CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCEEEECCCCCCHHHHHH LGESGLQEAVVEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFALEGRLQDD HCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC GSRFKVPQMGWNRVRQTQAHPLWDGVPDDAYFYFVHSYYVVPDNPAHTAGETLYGDVFTS CCEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHH AVARDNLFATQFHPEKSAEVGLRLYRNFVHWNP HHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTSIAIVDYGMGNLRSVAQALMKAEPAADVKIVDRPEAIRAADRVVLPGQGAMPDCMRY CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCEEEECCCCCCHHHHHH LGESGLQEAVVEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFALEGRLQDD HCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC GSRFKVPQMGWNRVRQTQAHPLWDGVPDDAYFYFVHSYYVVPDNPAHTAGETLYGDVFTS CCEEECCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHH AVARDNLFATQFHPEKSAEVGLRLYRNFVHWNP HHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]