| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814035
Identifier: 237814035
GI number: 237814035
Start: 3681619
End: 3681945
Strand: Reverse
Name: 237814035
Synonym: GBP346_A3819
Alternate gene names: NA
Gene position: 3681945-3681619 (Counterclockwise)
Preceding gene: 237814039
Following gene: 237814034
Centisome position: 89.83
GC content: 70.34
Gene sequence:
>327_bases GTGCGCGTGCGCCCGCAAACCGACCAAGTGATCGTGCAGAGCGCGCAAGTCGTGCCGTATGCGATCCGCGCGACGCTGCG CTTCTTCTCCGGCCCGGATCGCGGCGTGGCGCTCGCGGAAGCCCGCAAGCACACCGCGAAGTTCGCGGCGGACATGCGGC GCATCGGCATGGAAATCACGGTCGACGGCCTGCACGCGGCGATGCGCGTCGCCGGCGTGCAAAAGGTGCTGCTCGACTCG CCCGCCGGCGGCGTGCCCGTGACGCACGAGCAGGCGCCGTACTGCACCGGAATCGAGCTGATCGACGGCGGGGTGGCGGA TGACTAG
Upstream 100 bases:
>100_bases CTGGAGCGCGACGACGCGATCTGTGCCGAGGGGCTCGAGAAAGCGTCGGCCCTCAACCTCACCGTGGTCGTAGTAGTAAC GCTTGGTTCCGTCTGCGTTC
Downstream 100 bases:
>100_bases ACGGGCAACCTCGCTGCTGCCGCCGAACGCGACCGCGCTCGAGCGCCGGCTCGCGGACACGAACGCGCGCATCAGCGACA TCCCGGTCGACATCGGCGCG
Product: gp37, bacteriophage baseplate assembly protein J
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Baseplate Assembly-Like Protein; Phage Baseplate Assembly Protein J; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MRVRPQTDQVIVQSAQVVPYAIRATLRFFSGPDRGVALAEARKHTAKFAADMRRIGMEITVDGLHAAMRVAGVQKVLLDS PAGGVPVTHEQAPYCTGIELIDGGVADD
Sequences:
>Translated_108_residues MRVRPQTDQVIVQSAQVVPYAIRATLRFFSGPDRGVALAEARKHTAKFAADMRRIGMEITVDGLHAAMRVAGVQKVLLDS PAGGVPVTHEQAPYCTGIELIDGGVADD >Mature_108_residues MRVRPQTDQVIVQSAQVVPYAIRATLRFFSGPDRGVALAEARKHTAKFAADMRRIGMEITVDGLHAAMRVAGVQKVLLDS PAGGVPVTHEQAPYCTGIELIDGGVADD
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11555; Mature: 11555
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRPQTDQVIVQSAQVVPYAIRATLRFFSGPDRGVALAEARKHTAKFAADMRRIGMEIT CCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEE VDGLHAAMRVAGVQKVLLDSPAGGVPVTHEQAPYCTGIELIDGGVADD EHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MRVRPQTDQVIVQSAQVVPYAIRATLRFFSGPDRGVALAEARKHTAKFAADMRRIGMEIT CCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCEEE VDGLHAAMRVAGVQKVLLDSPAGGVPVTHEQAPYCTGIELIDGGVADD EHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA