Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814017

Identifier: 237814017

GI number: 237814017

Start: 3663059

End: 3664048

Strand: Direct

Name: 237814017

Synonym: GBP346_A3801

Alternate gene names: NA

Gene position: 3663059-3664048 (Clockwise)

Preceding gene: 237814016

Following gene: 237814018

Centisome position: 89.37

GC content: 66.77

Gene sequence:

>990_bases
ATGACGCAAACGGTCCAGGCCCAGATCGCCTACTTCGGCAAGATCCCGTCGCGCGGCGACTTCGTGAAGAGCGCGCACAA
CCCGCAGTTGCTGCAAACGCTCGACCACTGGATCGCGCGCGCGATGGAGCTCCTCGCCGACGACCCGCGCTGGAAGATCG
TCTACGAAAGCGCGAAACCGATGCACTTCGCGTTTCTCGGCTCGAAGAGCCGGCTGGCGATCGCGGGCCACATGATCGCG
AGCCACGACGCGTCGAACCGGCGCTTCCCGTTCCTCGCCGCGACGGCGCTCGAAGTCGATCGCCCGCTCACGTTCCTCGC
GCGCAGCCCGCTTGCGTTCGCGCGGCTCTGGTCGCGCGCCGCCGCGCAGATGCAGTCGCTCCTCGGCCCGCAGGAGCCGC
CCGGCGCGCTGCAGGCGCTCGGCGACACGCAAGTGCCGATCGACACGGGCGGCCCGGGCAGCGCGCACGACGGCACGTTC
AACGATTTCGTCGAACACCAGACCCTGTTCGGCCTCGAGCAGATGCTGCTCGCGAGCGGCCATCCGGTGAAGCTGCGCGG
CGCGATGCTCGCGCTCGGCTCGCTGCTGCGCCCGGTGATGCAAAGCGGCACGTCGCACATCGAGCGCGGCCTCACGCTGC
CGCTGCCGACCGATCCGTTCTACCGGAGCCTCGTCGCCGCATTCTGGCTCGAACTCGTCGCGCCGTTCGTGTCGCGCGCC
GATTTCGAGCTCGCGATCTTCATCGGCACGATCGCCGAGCGCGAGCGGCTCATCATCGGCTTCAACGGCGCGTCCGCGAA
AACCCTGCACAGCGTGGTCGATCCGCAGACTTACGCCGAACACAACATCGACATCGACGATCCGGAATGGATCGACGCAC
ATGCGCAAAACGACCATGGGATCAGCAAGCTCGTCAGTTATCTCGATCAACCGCAACTGTCGCTTCGCGTGTGCATCGAC
ACGTTCCGCGAAGCATTCGCCGGAGCGTGA

Upstream 100 bases:

>100_bases
CGGGCGGCGCGGCCAATGCGACGGCGCAACCCGGCTCGGGCGCCGCGGCCCCGCAGGTCGCCGCCACGGCCGCTTCCGCA
TCGAACGCACAGGGGGCGCA

Downstream 100 bases:

>100_bases
CGAGATGACGAAGCCCCGCCTGCCCCTGCTGCGCGCCTGCCGCTTCGCGCTCGCGCTCGCCGCGCTCGCGCTCGGCGGCG
CCGCGCGCGCCGACAACGTC

Product: type VI secretion-associated protein, family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTQTVQAQIAYFGKIPSRGDFVKSAHNPQLLQTLDHWIARAMELLADDPRWKIVYESAKPMHFAFLGSKSRLAIAGHMIA
SHDASNRRFPFLAATALEVDRPLTFLARSPLAFARLWSRAAAQMQSLLGPQEPPGALQALGDTQVPIDTGGPGSAHDGTF
NDFVEHQTLFGLEQMLLASGHPVKLRGAMLALGSLLRPVMQSGTSHIERGLTLPLPTDPFYRSLVAAFWLELVAPFVSRA
DFELAIFIGTIAERERLIIGFNGASAKTLHSVVDPQTYAEHNIDIDDPEWIDAHAQNDHGISKLVSYLDQPQLSLRVCID
TFREAFAGA

Sequences:

>Translated_329_residues
MTQTVQAQIAYFGKIPSRGDFVKSAHNPQLLQTLDHWIARAMELLADDPRWKIVYESAKPMHFAFLGSKSRLAIAGHMIA
SHDASNRRFPFLAATALEVDRPLTFLARSPLAFARLWSRAAAQMQSLLGPQEPPGALQALGDTQVPIDTGGPGSAHDGTF
NDFVEHQTLFGLEQMLLASGHPVKLRGAMLALGSLLRPVMQSGTSHIERGLTLPLPTDPFYRSLVAAFWLELVAPFVSRA
DFELAIFIGTIAERERLIIGFNGASAKTLHSVVDPQTYAEHNIDIDDPEWIDAHAQNDHGISKLVSYLDQPQLSLRVCID
TFREAFAGA
>Mature_328_residues
TQTVQAQIAYFGKIPSRGDFVKSAHNPQLLQTLDHWIARAMELLADDPRWKIVYESAKPMHFAFLGSKSRLAIAGHMIAS
HDASNRRFPFLAATALEVDRPLTFLARSPLAFARLWSRAAAQMQSLLGPQEPPGALQALGDTQVPIDTGGPGSAHDGTFN
DFVEHQTLFGLEQMLLASGHPVKLRGAMLALGSLLRPVMQSGTSHIERGLTLPLPTDPFYRSLVAAFWLELVAPFVSRAD
FELAIFIGTIAERERLIIGFNGASAKTLHSVVDPQTYAEHNIDIDDPEWIDAHAQNDHGISKLVSYLDQPQLSLRVCIDT
FREAFAGA

Specific function: Unknown

COG id: COG3913

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36142; Mature: 36010

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTVQAQIAYFGKIPSRGDFVKSAHNPQLLQTLDHWIARAMELLADDPRWKIVYESAKP
CCCCHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
MHFAFLGSKSRLAIAGHMIASHDASNRRFPFLAATALEVDRPLTFLARSPLAFARLWSRA
EEEEEECCCCCEEEEHHHHHCCCCCCCCCCEEEHHHHHHCCCHHHHHCCHHHHHHHHHHH
AAQMQSLLGPQEPPGALQALGDTQVPIDTGGPGSAHDGTFNDFVEHQTLFGLEQMLLASG
HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
HPVKLRGAMLALGSLLRPVMQSGTSHIERGLTLPLPTDPFYRSLVAAFWLELVAPFVSRA
CCEEHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DFELAIFIGTIAERERLIIGFNGASAKTLHSVVDPQTYAEHNIDIDDPEWIDAHAQNDHG
CCEEEEEEEHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC
ISKLVSYLDQPQLSLRVCIDTFREAFAGA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTVQAQIAYFGKIPSRGDFVKSAHNPQLLQTLDHWIARAMELLADDPRWKIVYESAKP
CCCHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
MHFAFLGSKSRLAIAGHMIASHDASNRRFPFLAATALEVDRPLTFLARSPLAFARLWSRA
EEEEEECCCCCEEEEHHHHHCCCCCCCCCCEEEHHHHHHCCCHHHHHCCHHHHHHHHHHH
AAQMQSLLGPQEPPGALQALGDTQVPIDTGGPGSAHDGTFNDFVEHQTLFGLEQMLLASG
HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
HPVKLRGAMLALGSLLRPVMQSGTSHIERGLTLPLPTDPFYRSLVAAFWLELVAPFVSRA
CCEEHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
DFELAIFIGTIAERERLIIGFNGASAKTLHSVVDPQTYAEHNIDIDDPEWIDAHAQNDHG
CCEEEEEEEHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC
ISKLVSYLDQPQLSLRVCIDTFREAFAGA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA