| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is cyaE [H]
Identifier: 237814010
GI number: 237814010
Start: 3655294
End: 3656742
Strand: Direct
Name: cyaE [H]
Synonym: GBP346_A3794
Alternate gene names: 237814010
Gene position: 3655294-3656742 (Clockwise)
Preceding gene: 237814009
Following gene: 237814011
Centisome position: 89.18
GC content: 68.74
Gene sequence:
>1449_bases ATGATCGCGATGAAGCCCGCACGCACCCTCGCCATGGCCGGCGCGCTCGCGCTCTTCGCATCGCAAGCGGCGCACGCGCA ATGGCTCGATCTCTACGGAACCCGAAAGAATGTGTCGGCTTCTCCCGCCGCGCCGATGCTGAAGAACGCGACATGCCAGC CCGAGCTCGCGGACCGTCCGATCGAGCTCGAAGACGCGATCCTGCAGGCGATCTGCGCGAACCCGCAGGCACGGCGCGCA TGGGCCGATGCGCGCGCGCAGGCCGCCCAGCTCGGCGTGAAGGAGGCGGCGTATCTGCCGACGCTCAATGCAACAGCGGG CATTCAGCGCAACTGGCAAACGACGACGTATGAGCAGGACCTCGGCCCGATCACGCTCACCGCCGACCAGAAGCAGATCC AGACGAGCCGCTACGGCGCGTTGAACCTGAGCTGGGTGCTGTTCGATTTCGGCAAGCGCAGCGCGGCGCTCAGGCAGGCG CGCGAGCTCCTCGCCGCCGCCAACGCGACGCAGGACGACACGCTCCAGACCATCCTGTTCAATGCCGCCCAGGCGTATTA CAACCTGCGCGACACGCAGGCGGCGCTTGACGCGGCGCGCACGACCGAACGCGTCGCGCAGGATAGCCTCACCGCGGCGA AGGCGAAGCACGACGCCGGCGCCGGCACGCTGAGCGATCAACTGCAGGCGCAAACGAGCTATCGCCGCGCGGTGCTCGAT CGCGTGAGCGCCGAAGGCGACGTGCGGAACGCGACGGGCGTGCTCGCCGTCGCGATGGGGCTCGACGCGAACACGCCGCT GCGGATCGCGACCGCCGAGCCGCCGGTCGATCGCAACGCGTTCGCCGAAGGCATCGCGCAATTGATCGACGAGGCGAAGC GGCAGCATCCGAAGCTCGTCGCCGCGCGCGCGAAACTCGACGCGGCGCGCGCGAACGTCGATGCGGTGCGTGCGCAGGGC CGCCCGACCATCTCGCTGACCGGCAGCCTCAGCCGCAACAGCCCGTCGTATCAGCAGCAGCCGGGCATCCAGACCACCGC GAGCCACGGCAGCATGATCGGCGTGCAGGTGACGATCCCGCTCTTCGAAGGCTTCGCGTCCGGCTACCGCGTCGCGGCCG CGCAGGCACAGGCGGATGCGCAGGAGGCCGACGTGCAGAACACCGAGCTGAACGTCTCGCTCGACGTGTGGAAGAGCTAT CAAAGCCTGCAGACCGACACCGCGAATCTCGACAATTCGAAGGACCTGCTCGGCGATGCGCAACGCTCGCTCGACATCGC ACGGGGCCGGTACAAGGCGGGCGTCGGCACGTTCACGGAGTTGCTCAATGCGCAGACCGCGCTCGCGGACGCGCAGAAGC AGCGCGTGCAGGCGCTGTCGAAATGGCGCACCGCGCGGCTCAAGCTCGCGGCGAGCCTCGGCAGCATCGGCCTGTGGTCC GCCCATTGA
Upstream 100 bases:
>100_bases CGGCGCCGGCTTCCGCCGAGGCACAGGCGGCGCCCGCTGCGGCCTGCGCCGCTCCCGCCGCGCCGCCCGCGCAAGCCGCT ACGCAACCGGCCACGGGGCG
Downstream 100 bases:
>100_bases ACGATGCGCGAACACAAAGGCGAAGGCGAACGCTCCTCGCGCTCGCGCACGGAACGATGAAGCGACCGGCGAAGGCGGCC CATGCGGCGACGCCCGCCGC
Product: type I secretion outer membrane protein, TolC family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MIAMKPARTLAMAGALALFASQAAHAQWLDLYGTRKNVSASPAAPMLKNATCQPELADRPIELEDAILQAICANPQARRA WADARAQAAQLGVKEAAYLPTLNATAGIQRNWQTTTYEQDLGPITLTADQKQIQTSRYGALNLSWVLFDFGKRSAALRQA RELLAAANATQDDTLQTILFNAAQAYYNLRDTQAALDAARTTERVAQDSLTAAKAKHDAGAGTLSDQLQAQTSYRRAVLD RVSAEGDVRNATGVLAVAMGLDANTPLRIATAEPPVDRNAFAEGIAQLIDEAKRQHPKLVAARAKLDAARANVDAVRAQG RPTISLTGSLSRNSPSYQQQPGIQTTASHGSMIGVQVTIPLFEGFASGYRVAAAQAQADAQEADVQNTELNVSLDVWKSY QSLQTDTANLDNSKDLLGDAQRSLDIARGRYKAGVGTFTELLNAQTALADAQKQRVQALSKWRTARLKLAASLGSIGLWS AH
Sequences:
>Translated_482_residues MIAMKPARTLAMAGALALFASQAAHAQWLDLYGTRKNVSASPAAPMLKNATCQPELADRPIELEDAILQAICANPQARRA WADARAQAAQLGVKEAAYLPTLNATAGIQRNWQTTTYEQDLGPITLTADQKQIQTSRYGALNLSWVLFDFGKRSAALRQA RELLAAANATQDDTLQTILFNAAQAYYNLRDTQAALDAARTTERVAQDSLTAAKAKHDAGAGTLSDQLQAQTSYRRAVLD RVSAEGDVRNATGVLAVAMGLDANTPLRIATAEPPVDRNAFAEGIAQLIDEAKRQHPKLVAARAKLDAARANVDAVRAQG RPTISLTGSLSRNSPSYQQQPGIQTTASHGSMIGVQVTIPLFEGFASGYRVAAAQAQADAQEADVQNTELNVSLDVWKSY QSLQTDTANLDNSKDLLGDAQRSLDIARGRYKAGVGTFTELLNAQTALADAQKQRVQALSKWRTARLKLAASLGSIGLWS AH >Mature_482_residues MIAMKPARTLAMAGALALFASQAAHAQWLDLYGTRKNVSASPAAPMLKNATCQPELADRPIELEDAILQAICANPQARRA WADARAQAAQLGVKEAAYLPTLNATAGIQRNWQTTTYEQDLGPITLTADQKQIQTSRYGALNLSWVLFDFGKRSAALRQA RELLAAANATQDDTLQTILFNAAQAYYNLRDTQAALDAARTTERVAQDSLTAAKAKHDAGAGTLSDQLQAQTSYRRAVLD RVSAEGDVRNATGVLAVAMGLDANTPLRIATAEPPVDRNAFAEGIAQLIDEAKRQHPKLVAARAKLDAARANVDAVRAQG RPTISLTGSLSRNSPSYQQQPGIQTTASHGSMIGVQVTIPLFEGFASGYRVAAAQAQADAQEADVQNTELNVSLDVWKSY QSLQTDTANLDNSKDLLGDAQRSLDIARGRYKAGVGTFTELLNAQTALADAQKQRVQALSKWRTARLKLAASLGSIGLWS AH
Specific function: CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI87082199, Length=423, Percent_Identity=21.9858156028369, Blast_Score=76, Evalue=4e-15,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 51615; Mature: 51615
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMKPARTLAMAGALALFASQAAHAQWLDLYGTRKNVSASPAAPMLKNATCQPELADRP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCHHCCCC IELEDAILQAICANPQARRAWADARAQAAQLGVKEAAYLPTLNATAGIQRNWQTTTYEQD CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCC LGPITLTADQKQIQTSRYGALNLSWVLFDFGKRSAALRQARELLAAANATQDDTLQTILF CCCEEEECCHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH NAAQAYYNLRDTQAALDAARTTERVAQDSLTAAKAKHDAGAGTLSDQLQAQTSYRRAVLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RVSAEGDVRNATGVLAVAMGLDANTPLRIATAEPPVDRNAFAEGIAQLIDEAKRQHPKLV HHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHH AARAKLDAARANVDAVRAQGRPTISLTGSLSRNSPSYQQQPGIQTTASHGSMIGVQVTIP HHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCEECCCCCEEEEEEEEH LFEGFASGYRVAAAQAQADAQEADVQNTELNVSLDVWKSYQSLQTDTANLDNSKDLLGDA HHHHHHCCCEEEHHHHHCCHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHH QRSLDIARGRYKAGVGTFTELLNAQTALADAQKQRVQALSKWRTARLKLAASLGSIGLWS HHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AH CC >Mature Secondary Structure MIAMKPARTLAMAGALALFASQAAHAQWLDLYGTRKNVSASPAAPMLKNATCQPELADRP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCHHCCCC IELEDAILQAICANPQARRAWADARAQAAQLGVKEAAYLPTLNATAGIQRNWQTTTYEQD CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCC LGPITLTADQKQIQTSRYGALNLSWVLFDFGKRSAALRQARELLAAANATQDDTLQTILF CCCEEEECCHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH NAAQAYYNLRDTQAALDAARTTERVAQDSLTAAKAKHDAGAGTLSDQLQAQTSYRRAVLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RVSAEGDVRNATGVLAVAMGLDANTPLRIATAEPPVDRNAFAEGIAQLIDEAKRQHPKLV HHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHH AARAKLDAARANVDAVRAQGRPTISLTGSLSRNSPSYQQQPGIQTTASHGSMIGVQVTIP HHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCEECCCCCEEEEEEEEH LFEGFASGYRVAAAQAQADAQEADVQNTELNVSLDVWKSYQSLQTDTANLDNSKDLLGDA HHHHHHCCCEEEHHHHHCCHHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHH QRSLDIARGRYKAGVGTFTELLNAQTALADAQKQRVQALSKWRTARLKLAASLGSIGLWS HHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]