| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is hemA [H]
Identifier: 237813979
GI number: 237813979
Start: 3627686
End: 3628990
Strand: Direct
Name: hemA [H]
Synonym: GBP346_A3763
Alternate gene names: 237813979
Gene position: 3627686-3628990 (Clockwise)
Preceding gene: 237813978
Following gene: 237813980
Centisome position: 88.51
GC content: 68.28
Gene sequence:
>1305_bases TTGGACATGCAGCTCCTCACGATCGGAATCAACCACCACACTGCGCCTGTCGCCTTGCGCGAACGCGTGGCGTTTCCGCT CGAACAGATCAAGCCCGCATTGTCGACGTTCAAGAGCGTCTTCCTCGGCCATCCGGCGCCGAACGCACCCGAAGCGGCGA TCCTGTCGACCTGCAATCGCACTGAACTGTATTGCGCGACCAACGATCGCGCCGCGCGCGACGCCGCGATCCGCTGGATG TCCGACTACCACCGGATTCCCGCCGACGAGCTCGCGCCGCACGTGTACGCGCTGCCGCAATCCGAGGCGGTGCGCCACGC GTTTCGCGTCGCGTCCGGGCTCGATTCGATGGTGCTCGGCGAAACGCAGATCCTCGGCCAGATGAAGAACGCGGTACGCA CCGCGTCCGAGGCGGGTTCGCTCGGCACCTACCTGAACCAGCTGTTCCAGCGCACGTTCGCGGTCGCGAAGGAAGTGCGC GGCACGACCGAGATCGGCGCGCAGTCGGTGTCGATGGCGGCTGCGGCCGTGCGCCTCGCACAGCGCATCTTCGAGCAGGT CGCGCAGCAGCGCGTGCTGTTCATCGGCGCGGGCGAGATGATCGAGCTCTGCGCGACCCACTTCGCCGCGCAGGGCCCGC GCGAGCTCGTCGTCGCGAACCGCACCGCCGAGCGCGGCGCGAAGCTCGCCGAGCGCTTCGGCGGCCGCGCGATGCCGCTC GCCGATCTGCCCGCGCGCATGCACGAGTTCGACATCATCGTGTCGTGCACGGCATCGACGCTGCCGATCATCGGTCTCGG CGCCGTCGAGCGCGCGGTGAAGGCGCGCCGCCACCGGCCGATCTTCATGGTCGACCTCGCGGTGCCGCGCGACATCGAGC CCGAAGTCGGCAAGCTGAAGGATGTGTTCCTCTATACCGTCGACGATCTCGGCGCGATCGTGCGCGAAGGCAATGCGTCG CGGCAGGCGGCCGTCGCGCAGGCCGAGGCGATCATCGAGACGCGCGTGCAGAATTTCATGCAGTGGCTCGACGCACGCAG CATCGTGCCCGTGATCCGTCACATGCATACGCAGGCGGACGCGTTGCGCCGCGCGGAAGTCGAGCGCGCGCGCAAGATGC TCGCGCGCGGCGACGATCCGGACGCCGTGCTCGATGCGCTGTCGCAAGCGCTCACCAACAAGCTGATTCACGGCCCGACG AGCGCGCTCAACCGCGCGAACGGCGCCGATCGCGATTCGCTGATCGACCTGATGCGCGGCTTCTACCAGCACGCGCCCCG CTCGTCGGACACGTCGGACCGTTAG
Upstream 100 bases:
>100_bases GACGGCCGGCGGCCGCCCGCGCCCCGCGAACGGGCCGCGACATGCGCCGACCATGGATTTGTCGTCGAAACGCTATAATA TGGGACTAAACGATAGCCTC
Downstream 100 bases:
>100_bases CGGCGCCCGCCGGCCCGCCCCTCCTTCCCCTTTTCGAATCCTTCCCTGGGAGCATCGCTCCGCACCATGAAGACGAGCAT GCAAAGCAAGCTCGACCAGC
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MDMQLLTIGINHHTAPVALRERVAFPLEQIKPALSTFKSVFLGHPAPNAPEAAILSTCNRTELYCATNDRAARDAAIRWM SDYHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGETQILGQMKNAVRTASEAGSLGTYLNQLFQRTFAVAKEVR GTTEIGAQSVSMAAAAVRLAQRIFEQVAQQRVLFIGAGEMIELCATHFAAQGPRELVVANRTAERGAKLAERFGGRAMPL ADLPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNAS RQAAVAQAEAIIETRVQNFMQWLDARSIVPVIRHMHTQADALRRAEVERARKMLARGDDPDAVLDALSQALTNKLIHGPT SALNRANGADRDSLIDLMRGFYQHAPRSSDTSDR
Sequences:
>Translated_434_residues MDMQLLTIGINHHTAPVALRERVAFPLEQIKPALSTFKSVFLGHPAPNAPEAAILSTCNRTELYCATNDRAARDAAIRWM SDYHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGETQILGQMKNAVRTASEAGSLGTYLNQLFQRTFAVAKEVR GTTEIGAQSVSMAAAAVRLAQRIFEQVAQQRVLFIGAGEMIELCATHFAAQGPRELVVANRTAERGAKLAERFGGRAMPL ADLPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNAS RQAAVAQAEAIIETRVQNFMQWLDARSIVPVIRHMHTQADALRRAEVERARKMLARGDDPDAVLDALSQALTNKLIHGPT SALNRANGADRDSLIDLMRGFYQHAPRSSDTSDR >Mature_434_residues MDMQLLTIGINHHTAPVALRERVAFPLEQIKPALSTFKSVFLGHPAPNAPEAAILSTCNRTELYCATNDRAARDAAIRWM SDYHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLGETQILGQMKNAVRTASEAGSLGTYLNQLFQRTFAVAKEVR GTTEIGAQSVSMAAAAVRLAQRIFEQVAQQRVLFIGAGEMIELCATHFAAQGPRELVVANRTAERGAKLAERFGGRAMPL ADLPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLKDVFLYTVDDLGAIVREGNAS RQAAVAQAEAIIETRVQNFMQWLDARSIVPVIRHMHTQADALRRAEVERARKMLARGDDPDAVLDALSQALTNKLIHGPT SALNRANGADRDSLIDLMRGFYQHAPRSSDTSDR
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=405, Percent_Identity=45.679012345679, Blast_Score=347, Evalue=1e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 47546; Mature: 47546
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMQLLTIGINHHTAPVALRERVAFPLEQIKPALSTFKSVFLGHPAPNAPEAAILSTCNR CCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC TELYCATNDRAARDAAIRWMSDYHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLG CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHH ETQILGQMKNAVRTASEAGSLGTYLNQLFQRTFAVAKEVRGTTEIGAQSVSMAAAAVRLA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QRIFEQVAQQRVLFIGAGEMIELCATHFAAQGPRELVVANRTAERGAKLAERFGGRAMPL HHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHCCCCCCH ADLPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLK HHHHHHHHHHHEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH DVFLYTVDDLGAIVREGNASRQAAVAQAEAIIETRVQNFMQWLDARSIVPVIRHMHTQAD HHHEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRRAEVERARKMLARGDDPDAVLDALSQALTNKLIHGPTSALNRANGADRDSLIDLMRG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH FYQHAPRSSDTSDR HHHHCCCCCCCCCC >Mature Secondary Structure MDMQLLTIGINHHTAPVALRERVAFPLEQIKPALSTFKSVFLGHPAPNAPEAAILSTCNR CCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC TELYCATNDRAARDAAIRWMSDYHRIPADELAPHVYALPQSEAVRHAFRVASGLDSMVLG CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHCCCEEECCCHHHHHHHHHHHHCCHHHHHH ETQILGQMKNAVRTASEAGSLGTYLNQLFQRTFAVAKEVRGTTEIGAQSVSMAAAAVRLA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QRIFEQVAQQRVLFIGAGEMIELCATHFAAQGPRELVVANRTAERGAKLAERFGGRAMPL HHHHHHHHHHHEEEECCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHCCCCCCH ADLPARMHEFDIIVSCTASTLPIIGLGAVERAVKARRHRPIFMVDLAVPRDIEPEVGKLK HHHHHHHHHHHEEEEECCCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH DVFLYTVDDLGAIVREGNASRQAAVAQAEAIIETRVQNFMQWLDARSIVPVIRHMHTQAD HHHEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRRAEVERARKMLARGDDPDAVLDALSQALTNKLIHGPTSALNRANGADRDSLIDLMRG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH FYQHAPRSSDTSDR HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA