| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813957
Identifier: 237813957
GI number: 237813957
Start: 3612732
End: 3612860
Strand: Direct
Name: 237813957
Synonym: GBP346_A3741
Alternate gene names: NA
Gene position: 3612732-3612860 (Clockwise)
Preceding gene: 237813951
Following gene: 237813958
Centisome position: 88.15
GC content: 59.69
Gene sequence:
>129_bases ATGAAACGGATCGCGGTTCTCGCCGCCCTCGCAGTCGCGCTGGGCAGCGTGCTCGCAGGATGCATCGTGGTGCCGGACGG CGGGTACGGATATGCTCATCACCGCGATTATTACTATTACCGGTATTGA
Upstream 100 bases:
>100_bases GCCGCGCATTACGCGCCACACGTTTCCTTACAAACGCACACCGCTTGTCATTCGGGCGGCCGCTACAGTGTGCCGACGCC AGCCACCACAGGAGATGTCG
Downstream 100 bases:
>100_bases TGCGCGGATCGGCGCCGGCCACGGATCAGCCGCCCCGCCGGCGGCGGCGAAGCGGCGGCGCGTCGCCCGGCGCGCGCGCC GGTTCTCGCACATGGCGATC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 42
Protein sequence:
>42_residues MKRIAVLAALAVALGSVLAGCIVVPDGGYGYAHHRDYYYYRY
Sequences:
>Translated_42_residues MKRIAVLAALAVALGSVLAGCIVVPDGGYGYAHHRDYYYYRY >Mature_42_residues MKRIAVLAALAVALGSVLAGCIVVPDGGYGYAHHRDYYYYRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4637; Mature: 4637
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIAVLAALAVALGSVLAGCIVVPDGGYGYAHHRDYYYYRY CCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKRIAVLAALAVALGSVLAGCIVVPDGGYGYAHHRDYYYYRY CCHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA