| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is resA [H]
Identifier: 237813868
GI number: 237813868
Start: 3518676
End: 3519236
Strand: Direct
Name: resA [H]
Synonym: GBP346_A3646
Alternate gene names: 237813868
Gene position: 3518676-3519236 (Clockwise)
Preceding gene: 237813867
Following gene: 237813869
Centisome position: 85.85
GC content: 62.39
Gene sequence:
>561_bases ATGAATAGCAAAGGCATTTTCGCCGGCATCGTGGTCGCGGCCGTCGCGGTCGCGGGCGGCCTCGCCGCCGGCCATTGGAT GCGCGGCAACCCGGCGAGCGGCCCACAAGCCGGCACGCCGGCCGGCGCCCCCGCCGCGGGCAATCCGGTCGACACGCTCT GGGCTGCGTCATATCCGGATGTCGACGGTAAGCCGCAGCGGCTCGCGGCATTCAAGGGCAAGAAGCTGGTGGTCAACTTC TGGGCGTCGTGGTGCGGCCCGTGCGTCGAGGAAATGCCTGAACTCGTGAAGCTGTCGCGGGAATACGAGAAGAAAGGCGT CCGTTTCGTCGGAATTGGCGTCGATTCCGACCAGAACGTAAAGAACTTCCTGAAGAAGGTGCCTGTCGACTACCCGATCG TCGTGAGCGGTTATGCTGGCGCCGATCTGGCCCGATATTTCGGCAACACCGCCGGCGCGCTGCCTTTTACCGTCGTCATT GACGAAACCGGTAAGATTCGCGAAACAAAATTGGGGCAAATTCGTCCAGACGAGCTGAAACGCACGCTCGATACGCTCTG A
Upstream 100 bases:
>100_bases GTGAAAGCGGACGCCCGCGGTCGTCTATCACGCGCCGACGCGCAAACGCTACGTGCGCTCGTCGACGCGGCGCCGTCCTC ACCAACCGAATCTCGAACCG
Downstream 100 bases:
>100_bases CCGTGCCCGGTAGACTGCCGGACGTTGGCGGAATTTGAAATCTCGTTAGCGCCGATTTGCATGAAGTTGACGGATTCTAC TCAAGCCGCCGAGCCGCCGC
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MNSKGIFAGIVVAAVAVAGGLAAGHWMRGNPASGPQAGTPAGAPAAGNPVDTLWAASYPDVDGKPQRLAAFKGKKLVVNF WASWCGPCVEEMPELVKLSREYEKKGVRFVGIGVDSDQNVKNFLKKVPVDYPIVVSGYAGADLARYFGNTAGALPFTVVI DETGKIRETKLGQIRPDELKRTLDTL
Sequences:
>Translated_186_residues MNSKGIFAGIVVAAVAVAGGLAAGHWMRGNPASGPQAGTPAGAPAAGNPVDTLWAASYPDVDGKPQRLAAFKGKKLVVNF WASWCGPCVEEMPELVKLSREYEKKGVRFVGIGVDSDQNVKNFLKKVPVDYPIVVSGYAGADLARYFGNTAGALPFTVVI DETGKIRETKLGQIRPDELKRTLDTL >Mature_186_residues MNSKGIFAGIVVAAVAVAGGLAAGHWMRGNPASGPQAGTPAGAPAAGNPVDTLWAASYPDVDGKPQRLAAFKGKKLVVNF WASWCGPCVEEMPELVKLSREYEKKGVRFVGIGVDSDQNVKNFLKKVPVDYPIVVSGYAGADLARYFGNTAGALPFTVVI DETGKIRETKLGQIRPDELKRTLDTL
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 19702; Mature: 19702
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKGIFAGIVVAAVAVAGGLAAGHWMRGNPASGPQAGTPAGAPAAGNPVDTLWAASYPD CCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC VDGKPQRLAAFKGKKLVVNFWASWCGPCVEEMPELVKLSREYEKKGVRFVGIGVDSDQNV CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH KNFLKKVPVDYPIVVSGYAGADLARYFGNTAGALPFTVVIDETGKIRETKLGQIRPDELK HHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH RTLDTL HHHHCC >Mature Secondary Structure MNSKGIFAGIVVAAVAVAGGLAAGHWMRGNPASGPQAGTPAGAPAAGNPVDTLWAASYPD CCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC VDGKPQRLAAFKGKKLVVNFWASWCGPCVEEMPELVKLSREYEKKGVRFVGIGVDSDQNV CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH KNFLKKVPVDYPIVVSGYAGADLARYFGNTAGALPFTVVIDETGKIRETKLGQIRPDELK HHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHH RTLDTL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA