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The map label for this gene is omlA [H]

Identifier: 237813821

GI number: 237813821

Start: 3476619

End: 3477380

Strand: Reverse

Name: omlA [H]

Synonym: GBP346_A3599

Alternate gene names: 237813821

Gene position: 3477380-3476619 (Counterclockwise)

Preceding gene: 237813823

Following gene: 237813820

Centisome position: 84.84

GC content: 73.75

Gene sequence:

>762_bases
GTGGTCGGACTGGCCGCCTGTTCGTCGTACGACAGCGTGACCCAGCGGATCGCGCAGAGCATTACGCCGTATCGGATCAC
CGTCGTCCAGGGCAACTTCGTGTCGCAGGAAAAGGCGTCGCAACTGCAGGTCGGCATGTCGCGCGAGCAGGTGCGCGCGC
TGCTCGGCACGCCGCTGCTGACCGACATGTTCCATGCGGATCGCTGGGATTACCTTTTCTACTTCAAGCGCGGCTCGACG
TCGGTCGTCCAGCAGCGCGATCTCGTGGTGAATTTCGCGGGCGATCGCCTCGCCGGCTGGTCGGGCGCCGAGAATCTGCC
GTCCGAGCTCGATCTGCTCGCCGACATCGACGGCGATCGTCGCGGCAAGAAGGCGCGCGCGGCCGCAGCCGCGGCCGCGC
GCGCCGCCTCCGCGCCCGAAGCCGCCGCGGCGGCTCCCGAAGCCATGCAGGCGGCGGAGCAGAACGACGCGAACGCGCAG
GCGGCGCGAGCGGCGAACCGCGCGACCGCGCAGGTGCCCGGTCAGAGCGGCGCGGCGTCCCGCTTCGCGCCTTCCGCGCA
GATGGCGCCGAACGCGCCGACGCCGGGCGGCCTGCCGCCCGGCGCCGCGCCCGCGATCCAGCCGCAGTTCCAGTTCCATC
GCCCGCCTCCGCCGCCCGCGCAGGGCGGCGCGAACCAGCCGGTCGGCCCGCAGGGCGCCGACGCGCTGCCGAACCAGCCG
CTCACGGCGCCCGCGTCCGGCGCGCAGGGAACGGGCGGCTGA

Upstream 100 bases:

>100_bases
GCCTTGGACAAGGGCCAGCACGGTGAGGGACATGATTCCAAGATCGCTTTTGCAACTTCAGAGGAGCCGCGTGCGGAGCA
CCGTCATCGCAGCTGTCGCC

Downstream 100 bases:

>100_bases
TCCGGCAGTCCGAGCCTAACCAGGGGCGGCGCGCGCCGCCCGTCTTTCATTCGTAGCAAGCAGGTAGCGCATGTCGTCCA
TGAAGATTGCGATTGCTGGG

Product: lipoprotein, SmpA/OmlA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRGST
SVVQQRDLVVNFAGDRLAGWSGAENLPSELDLLADIDGDRRGKKARAAAAAAARAASAPEAAAAAPEAMQAAEQNDANAQ
AARAANRATAQVPGQSGAASRFAPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPPAQGGANQPVGPQGADALPNQP
LTAPASGAQGTGG

Sequences:

>Translated_253_residues
MVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRGST
SVVQQRDLVVNFAGDRLAGWSGAENLPSELDLLADIDGDRRGKKARAAAAAAARAASAPEAAAAAPEAMQAAEQNDANAQ
AARAANRATAQVPGQSGAASRFAPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPPAQGGANQPVGPQGADALPNQP
LTAPASGAQGTGG
>Mature_253_residues
MVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLLTDMFHADRWDYLFYFKRGST
SVVQQRDLVVNFAGDRLAGWSGAENLPSELDLLADIDGDRRGKKARAAAAAAARAASAPEAAAAAPEAMQAAEQNDANAQ
AARAANRATAQVPGQSGAASRFAPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPPAQGGANQPVGPQGADALPNQP
LTAPASGAQGTGG

Specific function: May have a structural role in maintaining the cell envelope integrity [H]

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 26004; Mature: 26004

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLL
CCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCHHH
TDMFHADRWDYLFYFKRGSTSVVQQRDLVVNFAGDRLAGWSGAENLPSELDLLADIDGDR
HHHHHCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCC
RGKKARAAAAAAARAASAPEAAAAAPEAMQAAEQNDANAQAARAANRATAQVPGQSGAAS
CCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCEECCCCCCCCH
RFAPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPPAQGGANQPVGPQGADALPNQP
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LTAPASGAQGTGG
CCCCCCCCCCCCC
>Mature Secondary Structure
MVGLAACSSYDSVTQRIAQSITPYRITVVQGNFVSQEKASQLQVGMSREQVRALLGTPLL
CCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCHHH
TDMFHADRWDYLFYFKRGSTSVVQQRDLVVNFAGDRLAGWSGAENLPSELDLLADIDGDR
HHHHHCCCCCEEEEEECCCHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCC
RGKKARAAAAAAARAASAPEAAAAAPEAMQAAEQNDANAQAARAANRATAQVPGQSGAAS
CCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCEECCCCCCCCH
RFAPSAQMAPNAPTPGGLPPGAAPAIQPQFQFHRPPPPPAQGGANQPVGPQGADALPNQP
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LTAPASGAQGTGG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9973334 [H]