Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237813812

Identifier: 237813812

GI number: 237813812

Start: 3467703

End: 3468104

Strand: Direct

Name: 237813812

Synonym: GBP346_A3591

Alternate gene names: NA

Gene position: 3467703-3468104 (Clockwise)

Preceding gene: 237813811

Following gene: 237813822

Centisome position: 84.61

GC content: 68.16

Gene sequence:

>402_bases
TTGGACGCCCCTAAACCATCCGCGAGCCCCTTCCTCGATAACCGTTATTCGACAGACCGCGAAAGCCGGTTCACGCTCGC
ATCGTGCTCGCGGCTTGCTGCTTCTGCTTCTGCTTCTGCTTGCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCG
GCTTCGGCTTCGGCTTCGCGCCCGAGCTTGATCGCGACCGCTACCGAAGCCGCGGGCAAAATACCGCCCCTCAGCCGCGC
CCGTCACGCCTGCCGAGCCGTCCCGTTCGCCCGGCATGCCCGCGCGACGCCAAACGAAAAGCCCCGGCCACAGGGCCGGG
GCGACCTTCATCGAATCCGGACGGCACCGCCGTCAGGCGGCGCGACGCCAACCGCGCCGCCCGCGCGCTCAAAACGGCTT
GA

Upstream 100 bases:

>100_bases
GGATTAGCGGGCGGTTGAAACGCGCCAGCGAGTGCCGCCGCGGGAACCGGCCGCTCTCGCGACACGCGCCGTGAGCCGCT
CACCCCGGCCACGGTGACGG

Downstream 100 bases:

>100_bases
TCACCGCGAGCGCGACGGCCGCGAGCATCCCGAGCACCGGCAATTCGTTGAACACGCGATACCACTTGTCCGAGCGGCGG
TTCTCGCCGCGCTCGAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDAPKPSASPFLDNRYSTDRESRFTLASCSRLAASASASACGFGFGFGFGFGFGFGFGFAPELDRDRYRSRGQNTAPQPR
PSRLPSRPVRPACPRDAKRKAPATGPGRPSSNPDGTAVRRRDANRAARALKTA

Sequences:

>Translated_133_residues
MDAPKPSASPFLDNRYSTDRESRFTLASCSRLAASASASACGFGFGFGFGFGFGFGFGFAPELDRDRYRSRGQNTAPQPR
PSRLPSRPVRPACPRDAKRKAPATGPGRPSSNPDGTAVRRRDANRAARALKTA
>Mature_133_residues
MDAPKPSASPFLDNRYSTDRESRFTLASCSRLAASASASACGFGFGFGFGFGFGFGFGFAPELDRDRYRSRGQNTAPQPR
PSRLPSRPVRPACPRDAKRKAPATGPGRPSSNPDGTAVRRRDANRAARALKTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14255; Mature: 14255

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPKPSASPFLDNRYSTDRESRFTLASCSRLAASASASACGFGFGFGFGFGFGFGFGFA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
PELDRDRYRSRGQNTAPQPRPSRLPSRPVRPACPRDAKRKAPATGPGRPSSNPDGTAVRR
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHH
RDANRAARALKTA
HHHHHHHHHHHCC
>Mature Secondary Structure
MDAPKPSASPFLDNRYSTDRESRFTLASCSRLAASASASACGFGFGFGFGFGFGFGFGFA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
PELDRDRYRSRGQNTAPQPRPSRLPSRPVRPACPRDAKRKAPATGPGRPSSNPDGTAVRR
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHH
RDANRAARALKTA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA