| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813781
Identifier: 237813781
GI number: 237813781
Start: 3442486
End: 3443601
Strand: Reverse
Name: 237813781
Synonym: GBP346_A3559
Alternate gene names: NA
Gene position: 3443601-3442486 (Counterclockwise)
Preceding gene: 237813782
Following gene: 237813778
Centisome position: 84.02
GC content: 73.57
Gene sequence:
>1116_bases ATGAGCGCTCGGAGTGCCGGGAAGGTTCAAGAAGCTCAAGAAGCTCAAGAAGCGCGGGACGCGACGCGCCGCTGTGCGCA GCGGCCGACAGGCGCGCATGGCGCGGCCGATCACCGGCGCGCGGACCCGGCGACAACCGCTTTTGCCGACCGGGCCGACG GATCGTGCGGCGCGGGCGATCCGCGCGGCGCTTGCGGGCCGGCGCACCCCGAGCACGCGCGGCGCTCGGCCGCCGGCGGC GGCCCTGACGCACCCCGCGCGTTTGCTGTTTCGATGCGCCGACGCGGATCGTCCTGCGCCGATGGCGGAGCCTGTTTCGC ACGAATCGATTGGTCCGCGCCATGGCTCGCCCCGCTCGCCGATCGCGGCGAACGATGGACGCACGCGGCGCAACGGGGCG AGGCGGCATGGCTGCGCATGCTGAACGACGAGGCCCGAGCCGAGCGGCTCGCGACGGGGCGCGGCTTGCCGCTTCGCTTC ATCGCGCAGGCGGCGTTGCCGGCGGGCATCGCGTACGAGACCCACATCGCCGAAACGGGCGCCGTGCCGACCCGCCACAA TCTGCATGATTTCTTCAATGCGCTCGTCTGGTTCGCGTATCCGCGCATCAAGGCGGCGCTCAACGCGCGCCAGGCCGCGG CGATCGACGCGGCGGGCGTCGGCGCCGTGCGCGGCGGCGTTCGCGACGCCCTCACGCTGCTCGACGAGAACGGCGCGCTC TTCGCGACGTCGGATCCGGCGCTGGCCGCCGCACTGCGCGGCTTCGACTGGCCGACGCTGATGCGCGCGTCGCGCGATGC ATGGGGCGCGCGTTGCGATGCGCGGATCGTCGGCCATGCGCTCTGCGAAAAGCTCGTCGATCCGTACAAGGGCTGCACCG CGCACGCATGGATCGTCGAGGTGCCGGCCGCGTATTTCGACTGGCCCGACGCGCGGCGCCGCGCCTGGCTTGACGAGCGC GTGGCCGCGGCACTCGCCGCGACCGATCCGGCAAGCCGCGGCTTCGCGCCGCTGCCGGTGCTGGGCGTGCCCGGCTGGTG GCCGGCGAACGCGTCGCCGGCCTTCTACGACGATCCGCAGGTGTTTCGCCGCGGCCGCCGCGCGCGAGCGGAGTGA
Upstream 100 bases:
>100_bases GCGATCGGCTGGCGGCTCGTCTGATGCTCGCGGCGCCGCGGCGGGCCGGGTTGCCGCGCGCGGCGGCTTCGGTGTCGACA TGATGAGCGGGGCGCACGCC
Downstream 100 bases:
>100_bases CGCGCACCGGATGTCCTCGCCCGTGCCGCGTGACGGACGACGCTTGCCTCGGCGCGCCCGCGCGGTGCCGCGCACCGCCG GCGCACGCTTTCGCGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSARSAGKVQEAQEAQEARDATRRCAQRPTGAHGAADHRRADPATTAFADRADGSCGAGDPRGACGPAHPEHARRSAAGG GPDAPRAFAVSMRRRGSSCADGGACFARIDWSAPWLAPLADRGERWTHAAQRGEAAWLRMLNDEARAERLATGRGLPLRF IAQAALPAGIAYETHIAETGAVPTRHNLHDFFNALVWFAYPRIKAALNARQAAAIDAAGVGAVRGGVRDALTLLDENGAL FATSDPALAAALRGFDWPTLMRASRDAWGARCDARIVGHALCEKLVDPYKGCTAHAWIVEVPAAYFDWPDARRRAWLDER VAAALAATDPASRGFAPLPVLGVPGWWPANASPAFYDDPQVFRRGRRARAE
Sequences:
>Translated_371_residues MSARSAGKVQEAQEAQEARDATRRCAQRPTGAHGAADHRRADPATTAFADRADGSCGAGDPRGACGPAHPEHARRSAAGG GPDAPRAFAVSMRRRGSSCADGGACFARIDWSAPWLAPLADRGERWTHAAQRGEAAWLRMLNDEARAERLATGRGLPLRF IAQAALPAGIAYETHIAETGAVPTRHNLHDFFNALVWFAYPRIKAALNARQAAAIDAAGVGAVRGGVRDALTLLDENGAL FATSDPALAAALRGFDWPTLMRASRDAWGARCDARIVGHALCEKLVDPYKGCTAHAWIVEVPAAYFDWPDARRRAWLDER VAAALAATDPASRGFAPLPVLGVPGWWPANASPAFYDDPQVFRRGRRARAE >Mature_370_residues SARSAGKVQEAQEAQEARDATRRCAQRPTGAHGAADHRRADPATTAFADRADGSCGAGDPRGACGPAHPEHARRSAAGGG PDAPRAFAVSMRRRGSSCADGGACFARIDWSAPWLAPLADRGERWTHAAQRGEAAWLRMLNDEARAERLATGRGLPLRFI AQAALPAGIAYETHIAETGAVPTRHNLHDFFNALVWFAYPRIKAALNARQAAAIDAAGVGAVRGGVRDALTLLDENGALF ATSDPALAAALRGFDWPTLMRASRDAWGARCDARIVGHALCEKLVDPYKGCTAHAWIVEVPAAYFDWPDARRRAWLDERV AAALAATDPASRGFAPLPVLGVPGWWPANASPAFYDDPQVFRRGRRARAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39648; Mature: 39516
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARSAGKVQEAQEAQEARDATRRCAQRPTGAHGAADHRRADPATTAFADRADGSCGAGD CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC PRGACGPAHPEHARRSAAGGGPDAPRAFAVSMRRRGSSCADGGACFARIDWSAPWLAPLA CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHH DRGERWTHAAQRGEAAWLRMLNDEARAERLATGRGLPLRFIAQAALPAGIAYETHIAETG HCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCC AVPTRHNLHDFFNALVWFAYPRIKAALNARQAAAIDAAGVGAVRGGVRDALTLLDENGAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCE FATSDPALAAALRGFDWPTLMRASRDAWGARCDARIVGHALCEKLVDPYKGCTAHAWIVE EEECCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHEE VPAAYFDWPDARRRAWLDERVAAALAATDPASRGFAPLPVLGVPGWWPANASPAFYDDPQ CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHH VFRRGRRARAE HHHHHHHCCCC >Mature Secondary Structure SARSAGKVQEAQEAQEARDATRRCAQRPTGAHGAADHRRADPATTAFADRADGSCGAGD CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC PRGACGPAHPEHARRSAAGGGPDAPRAFAVSMRRRGSSCADGGACFARIDWSAPWLAPLA CCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHH DRGERWTHAAQRGEAAWLRMLNDEARAERLATGRGLPLRFIAQAALPAGIAYETHIAETG HCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCC AVPTRHNLHDFFNALVWFAYPRIKAALNARQAAAIDAAGVGAVRGGVRDALTLLDENGAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCE FATSDPALAAALRGFDWPTLMRASRDAWGARCDARIVGHALCEKLVDPYKGCTAHAWIVE EEECCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHEE VPAAYFDWPDARRRAWLDERVAAALAATDPASRGFAPLPVLGVPGWWPANASPAFYDDPQ CCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHH VFRRGRRARAE HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA