| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813767
Identifier: 237813767
GI number: 237813767
Start: 3430196
End: 3431338
Strand: Direct
Name: 237813767
Synonym: GBP346_A3544
Alternate gene names: NA
Gene position: 3430196-3431338 (Clockwise)
Preceding gene: 237813766
Following gene: 237813771
Centisome position: 83.69
GC content: 70.34
Gene sequence:
>1143_bases ATGCCGCGTCCGCTCCTGCATTTCGTCGCCGCCGCCACGTTCCCGTTCGTCGCCGCGCTCGCCGCCTGCGGCGGCGACGG CACCGCGCCCGCGCTCGCGCCCACACCGGCCGCCGTCGACGCCGGCTTCGTGTCCGGCCACGCACCGAATCCCGGACAGA ACGCCGGCGATTCGCCGGCGGCGCCCGCTCCCGCGCCCGGCAAATGGAAAAACGCGCGCGCGGGCGACATGCTCGAGGTC ACGCTCGGCGAGTTGCGTCCGACACAAGGCGCGCTCGGCTACGACCAGATCTATTACAAGCTCGGCCGCTACGAGCGGCA GCCGGACAAGAAGTTCGACGATTTCTGCGCGGACGACGGGCTTGGCGGCATCGCGCCGGACGGCTACACCGCGCTATCGG CGCTGCGCGACGCGGCGAGCTACGCCTGCGCGACGAGCGCCGCCGCACGCGATCGCTCGGTGCTCAACCCCGTCGTGATC GGGCCGAACGGCGACGCGCTGTACGTGACGGACGGGCACCACGGGCTGTCGACCTATTACGAGACGCCCGACGGCGGCGC GGCGCTGCGCGTGCACGTCGTCGTCAAGGACAACCTGGCCGATTACTCGGCCGCGGCGTTCTGGCAGCAGATGCAAAACC GCGGCTACACCCGCCTGAAGGACGGCGACGGCCGGCCCATCGCGCCGGACCGGCTGCCCGCCGGCCTCGGCCTGAAGCGC GGCATGCAGGACGACCGCTACCGGTCGCTCGTCTATTTCACGCGCGACATCGGCTACGCGAAGCCGGCGCAAGCCACCGA CTATCTCGAGTTCTACTGGGCGGACTGGCTGCGGCAACAGCCGCAGGCGTTCCCGCTCGCCAGCTACGACCTCACGCGCG CGGGCGCGACCGACCCTGATCCGGCGACGGCCGATACCGGCTATCTGAATGCGGTATGGAATGCGTCGGCGCGAATGGTC GCCTCGACCGATCCGGTGATCGATGGCAAGACGGGCGCGGACCTCGGCCGCGCCGACCAGATCAACGGCGGGAAGAAATA CGGCAAGGGGGAATTCGACAAGCTGCGCCAGCCGATCACGGCGGACAAGCCGGGCAAGATCGCGTACGCGCTCGATTACA AGTCCCGCCGCGGGCTGCGCTGA
Upstream 100 bases:
>100_bases TCACATCGATTCGTGATGCTGACGGGTCCGCGCTCGCGCGTCGATCGCGCGCCGCCGTCGCTGTCGCCTTCGTCCCACTC ACCATCGATTCCGATCGCCC
Downstream 100 bases:
>100_bases CGCGCGGCGGCCGCTGCAGGCGCGGCGGCCACGGCGGCCCGTTGGCCGCGGCGGCTATGGCCGGCCGCCGTGCGCCCACC CCGAAGGATGCCCCGCCCGT
Product: putative lipoprotein
Products: NA
Alternate protein names: ParB-Like Nuclease Family Protein; ParB-Like Nuclease
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MPRPLLHFVAAATFPFVAALAACGGDGTAPALAPTPAAVDAGFVSGHAPNPGQNAGDSPAAPAPAPGKWKNARAGDMLEV TLGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADDGLGGIAPDGYTALSALRDAASYACATSAAARDRSVLNPVVI GPNGDALYVTDGHHGLSTYYETPDGGAALRVHVVVKDNLADYSAAAFWQQMQNRGYTRLKDGDGRPIAPDRLPAGLGLKR GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPQAFPLASYDLTRAGATDPDPATADTGYLNAVWNASARMV ASTDPVIDGKTGADLGRADQINGGKKYGKGEFDKLRQPITADKPGKIAYALDYKSRRGLR
Sequences:
>Translated_380_residues MPRPLLHFVAAATFPFVAALAACGGDGTAPALAPTPAAVDAGFVSGHAPNPGQNAGDSPAAPAPAPGKWKNARAGDMLEV TLGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADDGLGGIAPDGYTALSALRDAASYACATSAAARDRSVLNPVVI GPNGDALYVTDGHHGLSTYYETPDGGAALRVHVVVKDNLADYSAAAFWQQMQNRGYTRLKDGDGRPIAPDRLPAGLGLKR GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPQAFPLASYDLTRAGATDPDPATADTGYLNAVWNASARMV ASTDPVIDGKTGADLGRADQINGGKKYGKGEFDKLRQPITADKPGKIAYALDYKSRRGLR >Mature_379_residues PRPLLHFVAAATFPFVAALAACGGDGTAPALAPTPAAVDAGFVSGHAPNPGQNAGDSPAAPAPAPGKWKNARAGDMLEVT LGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADDGLGGIAPDGYTALSALRDAASYACATSAAARDRSVLNPVVIG PNGDALYVTDGHHGLSTYYETPDGGAALRVHVVVKDNLADYSAAAFWQQMQNRGYTRLKDGDGRPIAPDRLPAGLGLKRG MQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPQAFPLASYDLTRAGATDPDPATADTGYLNAVWNASARMVA STDPVIDGKTGADLGRADQINGGKKYGKGEFDKLRQPITADKPGKIAYALDYKSRRGLR
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40555; Mature: 40423
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPLLHFVAAATFPFVAALAACGGDGTAPALAPTPAAVDAGFVSGHAPNPGQNAGDSPA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC APAPAPGKWKNARAGDMLEVTLGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADDG CCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC LGGIAPDGYTALSALRDAASYACATSAAARDRSVLNPVVIGPNGDALYVTDGHHGLSTYY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCEE ETPDGGAALRVHVVVKDNLADYSAAAFWQQMQNRGYTRLKDGDGRPIAPDRLPAGLGLKR ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHC GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPQAFPLASYDLTRAGATDPD CCCCHHHHEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PATADTGYLNAVWNASARMVASTDPVIDGKTGADLGRADQINGGKKYGKGEFDKLRQPIT CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC ADKPGKIAYALDYKSRRGLR CCCCCCEEEEEECCCCCCCC >Mature Secondary Structure PRPLLHFVAAATFPFVAALAACGGDGTAPALAPTPAAVDAGFVSGHAPNPGQNAGDSPA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCC APAPAPGKWKNARAGDMLEVTLGELRPTQGALGYDQIYYKLGRYERQPDKKFDDFCADDG CCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC LGGIAPDGYTALSALRDAASYACATSAAARDRSVLNPVVIGPNGDALYVTDGHHGLSTYY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCEE ETPDGGAALRVHVVVKDNLADYSAAAFWQQMQNRGYTRLKDGDGRPIAPDRLPAGLGLKR ECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHC GMQDDRYRSLVYFTRDIGYAKPAQATDYLEFYWADWLRQQPQAFPLASYDLTRAGATDPD CCCCHHHHEEEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PATADTGYLNAVWNASARMVASTDPVIDGKTGADLGRADQINGGKKYGKGEFDKLRQPIT CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC ADKPGKIAYALDYKSRRGLR CCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA