| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is tgt [H]
Identifier: 237813726
GI number: 237813726
Start: 3391713
End: 3392897
Strand: Direct
Name: tgt [H]
Synonym: GBP346_A3503
Alternate gene names: 237813726
Gene position: 3391713-3392897 (Clockwise)
Preceding gene: 237813725
Following gene: 237813727
Centisome position: 82.75
GC content: 66.75
Gene sequence:
>1185_bases ATGACGACCGAAGGTCCATCGCACGATACCTCCGCGGGCATTCGCCCGCACGGCGGCCTGAAATTCGAGCTGCTGACGAC CGACGGCCGCGCGCGGCGCGGCCGCGTGACGCTCAATCACGGCGTCGTCGAGACGCCGATCTTCATGCCGGTCGGCACGT ACGGCACCGTGAAGGCCGTGCAGCCGCGCGAACTCGACGAAATGCGCGCGCAGATCATCCTCGGCAACACGTTCCACCTG TGGCTGCGCCCCGGCCTCGAGACGATCGGCGCGCACGGCGGGCTGCACCGCTTCATGGGCTGGAACAAGCCGATCCTCAC CGATTCGGGCGGCTTCCAGGTGTTCTCGCTCGGCGATCTGCGCAAGATCACCGAGGAAGGCGTCACGTTCGCGTCGCCGA TCAACGGCGATCGGCTGTTCCTGTCGCCGGAAGTGTCGATGCAGATCCAGAAGGCGCTGAATTCCGACATCGTGATGCAG TTCGACGAATGCACGCCGTACGCGACGAACGGCGTGCCGACGACGCACCGGGAAGCGGCCGAATCGATGCGGATGTCGCT GCGCTGGGCGAAGCGCTCGCTCGACGAATTCGAGCGCCTCGGCAACCCGAACGCGCTGTTCGGCATCGTGCAGGGCGGGA TGTACGAGGACCTGCGCGACGAATCGCTCGCTGGGCTCTCGGCGCTCGGCTTCCACGGCCTCGCGATCGGCGGGCTGTCG GTCGGCGAGCCGAAGGAGGACATGATGCGCGTGCTCGAGCACGTCGCGCCGCGCCTGCCCGCCGACAAGCCGCACTACCT GATGGGCGTGGGCACGCCGGAGGATCTCGTCGCGGGCGTCGCGGCGGGCGTCGACATGTTCGACTGCGTGATGCCGACCC GCAACGCGCGCAACGGCTGGCTCTTCACGCGCTTCGGCGACGTGAAGATCCGCAACGCGACGCACAAGAATTCGCTCAAG CCGCTCGACGAGACCTGCGGCTGCTATACGTGCCGGAATTTCTCGCGCGGCTACCTGCATCATCTGCACCGCGTCGGCGA GATTCTCGGCGCGCAGTTGAACACGATCCACAACCTGCACTACTACCTCGATCTGATGCGCGAGATCCGCGAGGCGATCG AGACGCACACGTTCGAGGCGTTCCAAAAGCGCTTCGCGCAGGACCGCGCGCGCGGCGTCGACTGA
Upstream 100 bases:
>100_bases CGCGAGCCGCGCTTCACTTTTTTCCTTCGCGGCAAGCCGACGGCTCGCCGCGCCTTCAACATGCGCCGGACTGTATTCCG GTGGCAAGGAGTCCAACCAG
Downstream 100 bases:
>100_bases CGCCGCGCGGCCGCGCCGGCATCGGCATCGGCATCGGCATCGGCATTGGCGACGCCGCGCTCGCGCGCCAATCGCGCGGG CAATGCCGCCGCGCCGCAGC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTTEGPSHDTSAGIRPHGGLKFELLTTDGRARRGRVTLNHGVVETPIFMPVGTYGTVKAVQPRELDEMRAQIILGNTFHL WLRPGLETIGAHGGLHRFMGWNKPILTDSGGFQVFSLGDLRKITEEGVTFASPINGDRLFLSPEVSMQIQKALNSDIVMQ FDECTPYATNGVPTTHREAAESMRMSLRWAKRSLDEFERLGNPNALFGIVQGGMYEDLRDESLAGLSALGFHGLAIGGLS VGEPKEDMMRVLEHVAPRLPADKPHYLMGVGTPEDLVAGVAAGVDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLK PLDETCGCYTCRNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLDLMREIREAIETHTFEAFQKRFAQDRARGVD
Sequences:
>Translated_394_residues MTTEGPSHDTSAGIRPHGGLKFELLTTDGRARRGRVTLNHGVVETPIFMPVGTYGTVKAVQPRELDEMRAQIILGNTFHL WLRPGLETIGAHGGLHRFMGWNKPILTDSGGFQVFSLGDLRKITEEGVTFASPINGDRLFLSPEVSMQIQKALNSDIVMQ FDECTPYATNGVPTTHREAAESMRMSLRWAKRSLDEFERLGNPNALFGIVQGGMYEDLRDESLAGLSALGFHGLAIGGLS VGEPKEDMMRVLEHVAPRLPADKPHYLMGVGTPEDLVAGVAAGVDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLK PLDETCGCYTCRNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLDLMREIREAIETHTFEAFQKRFAQDRARGVD >Mature_393_residues TTEGPSHDTSAGIRPHGGLKFELLTTDGRARRGRVTLNHGVVETPIFMPVGTYGTVKAVQPRELDEMRAQIILGNTFHLW LRPGLETIGAHGGLHRFMGWNKPILTDSGGFQVFSLGDLRKITEEGVTFASPINGDRLFLSPEVSMQIQKALNSDIVMQF DECTPYATNGVPTTHREAAESMRMSLRWAKRSLDEFERLGNPNALFGIVQGGMYEDLRDESLAGLSALGFHGLAIGGLSV GEPKEDMMRVLEHVAPRLPADKPHYLMGVGTPEDLVAGVAAGVDMFDCVMPTRNARNGWLFTRFGDVKIRNATHKNSLKP LDETCGCYTCRNFSRGYLHHLHRVGEILGAQLNTIHNLHYYLDLMREIREAIETHTFEAFQKRFAQDRARGVD
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=356, Percent_Identity=44.9438202247191, Blast_Score=299, Evalue=4e-81, Organism=Escherichia coli, GI1786607, Length=374, Percent_Identity=66.5775401069519, Blast_Score=504, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17544680, Length=371, Percent_Identity=43.6657681940701, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI25146502, Length=138, Percent_Identity=28.9855072463768, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI19920510, Length=381, Percent_Identity=44.3569553805774, Blast_Score=321, Evalue=4e-88, Organism=Drosophila melanogaster, GI21355311, Length=158, Percent_Identity=29.1139240506329, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 43841; Mature: 43709
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEGPSHDTSAGIRPHGGLKFELLTTDGRARRGRVTLNHGVVETPIFMPVGTYGTVKAV CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCEEECCEEEECCCCCCEECC QPRELDEMRAQIILGNTFHLWLRPGLETIGAHGGLHRFMGWNKPILTDSGGFQVFSLGDL CCCCHHHHHHEEEECCEEEEEECCCHHHHHCCCCHHHHCCCCCCEEECCCCEEEEECCHH RKITEEGVTFASPINGDRLFLSPEVSMQIQKALNSDIVMQFDECTPYATNGVPTTHREAA HHHHHCCCEEECCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHH ESMRMSLRWAKRSLDEFERLGNPNALFGIVQGGMYEDLRDESLAGLSALGFHGLAIGGLS HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCHHHHCCCCEEECCCC VGEPKEDMMRVLEHVAPRLPADKPHYLMGVGTPEDLVAGVAAGVDMFDCVMPTRNARNGW CCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCE LFTRFGDVKIRNATHKNSLKPLDETCGCYTCRNFSRGYLHHLHRVGEILGAQLNTIHNLH EEEEECCEEEECCCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YYLDLMREIREAIETHTFEAFQKRFAQDRARGVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTEGPSHDTSAGIRPHGGLKFELLTTDGRARRGRVTLNHGVVETPIFMPVGTYGTVKAV CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCEEECCEEEECCCCCCEECC QPRELDEMRAQIILGNTFHLWLRPGLETIGAHGGLHRFMGWNKPILTDSGGFQVFSLGDL CCCCHHHHHHEEEECCEEEEEECCCHHHHHCCCCHHHHCCCCCCEEECCCCEEEEECCHH RKITEEGVTFASPINGDRLFLSPEVSMQIQKALNSDIVMQFDECTPYATNGVPTTHREAA HHHHHCCCEEECCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHH ESMRMSLRWAKRSLDEFERLGNPNALFGIVQGGMYEDLRDESLAGLSALGFHGLAIGGLS HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCHHHHCCCCEEECCCC VGEPKEDMMRVLEHVAPRLPADKPHYLMGVGTPEDLVAGVAAGVDMFDCVMPTRNARNGW CCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCE LFTRFGDVKIRNATHKNSLKPLDETCGCYTCRNFSRGYLHHLHRVGEILGAQLNTIHNLH EEEEECCEEEECCCCCCCCCCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YYLDLMREIREAIETHTFEAFQKRFAQDRARGVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA