| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is recG [H]
Identifier: 237813724
GI number: 237813724
Start: 3387463
End: 3390183
Strand: Reverse
Name: recG [H]
Synonym: GBP346_A3501
Alternate gene names: 237813724
Gene position: 3390183-3387463 (Counterclockwise)
Preceding gene: 237813731
Following gene: 237813723
Centisome position: 82.72
GC content: 74.68
Gene sequence:
>2721_bases GTGCCCGTTCGCCGTTCCCTAGCCGATTCCGCCGAAGCCGACGCGATTGCCGATGACGCCGCGTCGGGCGACGAAGCGCG GCGCGGCGCGGCCGGGGCCGCAGGCGGTGTGGATGCCGCGGCTCCGGCGGGCGCCGCGCAGGCCGCTCCCCTCGCGGGCG CGGCGGACGCGCTTGCGCCGCGGCGCGCGACGAAGGCGCGGACGAGCCGCGAGGCCGGCGCGCGCGTCGAGCGTGGCGCG CCGCGTGGCCGGGGCGCGACGCAAGCCGCGCCCGCCTCGAGCGCGCACGATCTTCCCGACACGGCCGGCGCACCCGCTGC ACCCGACGTCGATCCGTTCGATGCGGCGCCCGCGTCGCCGCCTCACGCGGCGGCCTGGGCGGAATTCGGCGCCGCGGCCG ACGCCGGCGCGCGATCGGCGCCGCGCGCGACGCCGCGCGGCCGCACCGCCGACGGCCGCGCCGTGCCGGCCGCCGCCCAG GCGGCGCGTGCGCCTCGCGCGCCCCGAGCCGCGCCGCCCGACGCACTACCCGCCGACACGCCGCCCGCCAGCGCGGCGAA GCCCGCCAAACGGGCGGCGAAGGCCGCCTCGAAAACGGTCTCGAAGGCGGCCTCGAAGGCGGCAGCGGACGCAGCCGGCG CCCAGGCGGCACCGAAGGCCGTGAAAACCGCCGACAAACTCGCGAAGCTCGGCTTGACGCGGGATATCGACCTCGTCCTG CATCTGCCGATGCGCTACGAGGACGAGACGACGCTCACGCCGATGCGCGAACTGTTGCCGGGCGAGACCGCGCAGACGGA AGGCGTCGTGTTCGACAACGAGATCGCGTACCGGCCGCGCCGTCAGTTGCTCGTGAAGCTGCGCGACGACGACGGCGCCG AGCTCGTGCTGCGCTTCCTGAATTTCTACGGCTCGCAGGTCAAGCAGATGGCGGTCGGCCAGCGGCTGCGCGTGCGCGGC GACGTGCGCGGCGGCTTCTTCGGGCTGGAGATCGTGCATCCGACGGTGAAGACCGTCGACGAGGACGCGCCGCTGCCGCA AGCGCTGACGCCCGTCTATCCGAGCACGGCGGGCGTGTCGCAGGCGTATCTGCGCAAGGCGATCGACAATGCGCTCGCGC GCACGCCGCTGCCCGAGCTGCTGCCGCCCGAGATCGCGCGCGCGTATCTGCAGCCGCTCGACGTGCCGCCGCTCGCCGAC GCGGTGCGCATGCTCCATCACCCGGGCGTCGGCGCGGACGAGACGGCGCTCATCGACGGCACCCACCCCGCGTGGACGCG CATCAAGTTCGACGAGCTGCTCGCGCAGCAACTGTCGCTCAAGCGCGCGCACGAGGAGCGCCGCACGCGCGCCGCGCCCG CGATGCCGCGCCGCGCGCGCGACGACGGCGCGGCGCTGTCCGCGCGCCTGCACGCGGCGCTGCCGTTTGCGCTCACGGCC GCGCAGGAGCGCGTCGTCGCGGAGATCGCGCACGACCTCACGCAGCCGCACCCGATGCAGCGCCTGCTGCAGGGCGACGT CGGCAGCGGCAAGACGGTCGTCGCGGCGCTCGCGGCCGCGCAGGCGATCGACGCCGGCTACCAGGCCGCGCTGATGGCGC CTACCGAAATCCTCGCCGAGCAGCACGCGCGCAAGCTGCGCGGCTGGCTCGAGCCGCTCGGCGTGTCGGTCGCGTGGCTC GCCGGCAGCCTGAAGGCGAAGGACAAGCGCGCGGCGCTCGAGGCGGCCGCGCTCGGCACCGCGCAGCTCGTGATCGGCAC GCACGCGATGATTCAGGACACCGTCGAATTCGCGCGGCTCGGGCTCGTGATCGTCGACGAGCAGCACCGCTTCGGCGTCG AGCAGCGGCTCGCGCTGCGGGCGAAGGCGGCGAACGCGGCCGACGGCGCGGCGGGCTTCCAGCCGCACCAGTTGATGATG TCGGCGACGCCGATCCCGCGCACGCTCGCGATGACGTACTACGCGGATCTCGACGTGTCGACGATCGACGAGCTGCCGCC CGGGCGCACGCCGATCCTCACGCGGCTCGTGTCGGACGCGCGGCGCGACGAGGTGATCGGCCGCGTGCGCGAGGCGGCGC TCGCGGGCCGTCAGGTGTACTGGGTGTGCCCGCTCATCGAGGAAAGCGAGACGCTGCAACTGCAGACGGCTGTCGAGACC TACGAGACGCTCGCCGCCGCGCTGCCCGAGCTGAAGGTGGGGCTCGTGCACGGCCGGCTCGCGCCCGCGGAGAAGGCGGC CGTGATGGACGCGTTCTCGCGCAACGACGTGCAATTGCTCGTCGCGACGACGGTGATCGAAGTCGGCGTCGACGTGCCGA ACGCGTCGCTGATGGTGATCGAGCACGCGGAGCGCTTCGGGCTCGCGCAGCTGCACCAGCTGCGCGGGCGCGTCGGGCGC GGCACGGCCGCGTCGGTGTGCGTGCTGATGTACAGCGGGCCGCTGTCGATCGCGGGCCGCGCGCGGCTGAAGACGATGCG CGAGACGACCGACGGCTTCGAGATCGCGCGCCGCGATCTGGAGATCCGCGGCCCCGGCGAATTCCTCGGCGCGCGCCAGT CGGGCGCGGCGATGCTGCGCTTCGCGGACCTGGAAAACGACGGCTGGCTGATCGAGCCGGCGCGCGACGCGGCCGCGCGG CTCATCGCCGCCCATCCGGAGGTCGTCGCGCAGCACCTCGCCCGCTGGCTCGGCGCGCGCGAGCAGTATCTGAAGGCCTG A
Upstream 100 bases:
>100_bases TGAGCCGCTATGATGGCGGGGTTGCGCGGCTTGGCCGGCGTCGCTCGTTGGTGCGACGTGAAAGCCGCTATTGTACTTGC TAGCCTTCTGACCGATGCCC
Downstream 100 bases:
>100_bases GCGCGGAGGCGCGACGGCCGCGCGGGCGGCGTTTCGCGCGCTTCGGACAGGCTTGTTTTCGGCGAAGGTTGGCGAATCGA CCCAAACCAGTGTATAAATT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 906; Mature: 905
Protein sequence:
>906_residues MPVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAAAPAGAAQAAPLAGAADALAPRRATKARTSREAGARVERGA PRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASPPHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQ AARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAASKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVL HLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRG DVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLAD AVRMLHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTA AQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWL AGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMM SATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVET YETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGR GTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAAR LIAAHPEVVAQHLARWLGAREQYLKA
Sequences:
>Translated_906_residues MPVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAAAPAGAAQAAPLAGAADALAPRRATKARTSREAGARVERGA PRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASPPHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQ AARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAASKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVL HLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRG DVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLAD AVRMLHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTA AQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWL AGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMM SATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVET YETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGR GTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAAR LIAAHPEVVAQHLARWLGAREQYLKA >Mature_905_residues PVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAAAPAGAAQAAPLAGAADALAPRRATKARTSREAGARVERGAP RGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASPPHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQA ARAPRAPRAAPPDALPADTPPASAAKPAKRAAKAASKTVSKAASKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVLH LPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGD VRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADA VRMLHHPGVGADETALIDGTHPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTAA QERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVAWLA GSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARLGLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMS ATPIPRTLAMTYYADLDVSTIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVETY ETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRG TAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARL IAAHPEVVAQHLARWLGAREQYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=691, Percent_Identity=51.6642547033285, Blast_Score=629, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=393, Percent_Identity=38.1679389312977, Blast_Score=231, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 95572; Mature: 95441
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAAAPAGAAQAAPLAGAADALAP CCCHHHHHCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC RRATKARTSREAGARVERGAPRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASP HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQAARAPRAPRAAPPDALPADT CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC PPASAAKPAKRAAKAASKTVSKAASKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHCCCCCCEEEE HLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFL ECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHEEEECCCCCHHHHHHHH NFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVS HHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHH QAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRMLHHPGVGADETALIDG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEC THPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTA CCCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAE HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHH QHARKLRGWLEPLGVSVAWLAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARL HHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC GLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVS CEEEECCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCHHHEEEEEECCCHH TIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVET HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHH YETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVI HHHHHHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEE EHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDL ECHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCC EIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAAHPEVVAQHLARWLGAR CCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCH EQYLKA HHHHCC >Mature Secondary Structure PVRRSLADSAEADAIADDAASGDEARRGAAGAAGGVDAAAPAGAAQAAPLAGAADALAP CCHHHHHCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC RRATKARTSREAGARVERGAPRGRGATQAAPASSAHDLPDTAGAPAAPDVDPFDAAPASP HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PHAAAWAEFGAAADAGARSAPRATPRGRTADGRAVPAAAQAARAPRAPRAAPPDALPADT CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC PPASAAKPAKRAAKAASKTVSKAASKAAADAAGAQAAPKAVKTADKLAKLGLTRDIDLVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHCCCCCCEEEE HLPMRYEDETTLTPMRELLPGETAQTEGVVFDNEIAYRPRRQLLVKLRDDDGAELVLRFL ECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHEEEECCCCCHHHHHHHH NFYGSQVKQMAVGQRLRVRGDVRGGFFGLEIVHPTVKTVDEDAPLPQALTPVYPSTAGVS HHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCHH QAYLRKAIDNALARTPLPELLPPEIARAYLQPLDVPPLADAVRMLHHPGVGADETALIDG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEC THPAWTRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRARDDGAALSARLHAALPFALTA CCCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AQERVVAEIAHDLTQPHPMQRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAE HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHH QHARKLRGWLEPLGVSVAWLAGSLKAKDKRAALEAAALGTAQLVIGTHAMIQDTVEFARL HHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC GLVIVDEQHRFGVEQRLALRAKAANAADGAAGFQPHQLMMSATPIPRTLAMTYYADLDVS CEEEECCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCCHHHEEEEEECCCHH TIDELPPGRTPILTRLVSDARRDEVIGRVREAALAGRQVYWVCPLIEESETLQLQTAVET HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHH YETLAAALPELKVGLVHGRLAPAEKAAVMDAFSRNDVQLLVATTVIEVGVDVPNASLMVI HHHHHHHCCHHHEEHHHCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEE EHAERFGLAQLHQLRGRVGRGTAASVCVLMYSGPLSIAGRARLKTMRETTDGFEIARRDL ECHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCC EIRGPGEFLGARQSGAAMLRFADLENDGWLIEPARDAAARLIAAHPEVVAQHLARWLGAR CCCCCHHHHCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCH EQYLKA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]